prot_H-elongata_contig101322.116.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101322.116.1
Unique Nameprot_H-elongata_contig101322.116.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length77
Homology
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Match: A0A7S3Y074_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y074_HETAK)

HSP 1 Score: 155 bits (391), Expect = 3.640e-45
Identity = 70/77 (90.91%), Postives = 76/77 (98.70%), Query Frame = 0
Query:    1 AKRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 77
            AKRYG+KR+FGFVDVYKEEMPPEHVRKIIRDHGDMT+KKFRHDKRVYLGALK+VPHAVYKL+ENMPMPWE VRNV+V
Sbjct:   27 AKRYGEKRRFGFVDVYKEEMPPEHVRKIIRDHGDMTAKKFRHDKRVYLGALKYVPHAVYKLLENMPMPWEQVRNVKV 103          
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Match: A0A6H5K085_9PHAE (MPN domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K085_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 3.680e-44
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0
Query:    1 AKRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 77
            AKRYGQKRKFGFVDVYKEEMP EHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV
Sbjct:  138 AKRYGQKRKFGFVDVYKEEMPAEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 214          
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Match: A0A078JR71_BRANA (BnaCnng61100D protein n=1 Tax=Brassica napus TaxID=3708 RepID=A0A078JR71_BRANA)

HSP 1 Score: 144 bits (363), Expect = 2.650e-42
Identity = 65/77 (84.42%), Postives = 73/77 (94.81%), Query Frame = 0
Query:    1 AKRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 77
            +KRYG KRKFGFV+  KE+MPPEHVRKIIRDHGDM+SKKFRHDKRVYLGALKFVPHAV+KL+ENMPMPWE VR+V+V
Sbjct:   63 SKRYGDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKFRHDKRVYLGALKFVPHAVFKLLENMPMPWEQVRDVKV 139          
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Match: A0A836C932_9STRA (NUC071 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C932_9STRA)

HSP 1 Score: 154 bits (389), Expect = 7.220e-42
Identity = 69/77 (89.61%), Postives = 77/77 (100.00%), Query Frame = 0
Query:    1 AKRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 77
            AK+YG+K+KFGFVDVYKE+MPPEHVRKII+DHGDMTSKKFRHDKRV+LGALKFVPHAVYKL+ENMPMPWEAVRNV+V
Sbjct:   70 AKKYGEKKKFGFVDVYKEDMPPEHVRKIIKDHGDMTSKKFRHDKRVFLGALKFVPHAVYKLLENMPMPWEAVRNVKV 146          
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Match: A0A1R3KSZ0_COCAP (Pre-mRNA-processing-splicing factor 8 (Fragment) n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3KSZ0_COCAP)

HSP 1 Score: 144 bits (363), Expect = 7.300e-42
Identity = 64/77 (83.12%), Postives = 73/77 (94.81%), Query Frame = 0
Query:    1 AKRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 77
            +KRYG KRKFGFV+  KE+MPPEHVRKIIRDHGDM+SKK+RHDKRVYLGALKF+PHAVYKL+ENMPMPWE VR+V+V
Sbjct:   54 SKRYGDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFIPHAVYKLLENMPMPWEQVRDVKV 130          
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Match: A0A314ZFU1_PRUYE (Pre-mRNA-processing-splicing factor 8A-like n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314ZFU1_PRUYE)

HSP 1 Score: 142 bits (359), Expect = 1.010e-41
Identity = 65/77 (84.42%), Postives = 72/77 (93.51%), Query Frame = 0
Query:    1 AKRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 77
            +KRY  KRKFGFV+  KE+MPPEHVRKIIRDHGDM+SKKFRHDKRVYLGALKFVPHAVYKL+ENMPMPWE VR+V+V
Sbjct:   52 SKRYSDKRKFGFVESQKEDMPPEHVRKIIRDHGDMSSKKFRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRDVKV 128          
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Match: A0A4S8JER4_MUSBA (PRO8NT domain-containing protein n=1 Tax=Musa balbisiana TaxID=52838 RepID=A0A4S8JER4_MUSBA)

HSP 1 Score: 142 bits (358), Expect = 1.130e-41
Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 0
Query:    1 AKRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 77
             KRYG KRKFGFV+  KE+MPPEHVRKIIRDHGDM+SKK R+DKRVYLGALKFVPHAVYKL+ENMPMPWE VRNV+V
Sbjct:   60 TKRYGDKRKFGFVETQKEDMPPEHVRKIIRDHGDMSSKKHRYDKRVYLGALKFVPHAVYKLLENMPMPWEQVRNVKV 136          
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Match: A0A7C9B3B5_OPUST (PRO8NT domain-containing protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C9B3B5_OPUST)

HSP 1 Score: 141 bits (356), Expect = 1.140e-41
Identity = 64/76 (84.21%), Postives = 71/76 (93.42%), Query Frame = 0
Query:    2 KRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 77
            KRYG KR FGFV+  KE+MPPEHVRKIIRDHGDM+SKK+RHDKRVYLGALKFVPHAVYKL+ENMPMPWE VR+V+V
Sbjct:    1 KRYGDKRTFGFVETQKEDMPPEHVRKIIRDHGDMSSKKYRHDKRVYLGALKFVPHAVYKLLENMPMPWEQVRDVKV 76          
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Match: A0A183GXD1_HELPZ (PRO8NT domain-containing protein n=1 Tax=Heligmosomoides polygyrus TaxID=6339 RepID=A0A183GXD1_HELPZ)

HSP 1 Score: 139 bits (349), Expect = 7.690e-41
Identity = 62/77 (80.52%), Postives = 71/77 (92.21%), Query Frame = 0
Query:    1 AKRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 77
            +KRY +KRKFG VD  KEEMPPEHVRKIIRDHGDMTS+KFRHDKRVYLGALK++PHAV KL+ENMPMPWE +R+V+V
Sbjct:   44 SKRYAEKRKFGVVDTQKEEMPPEHVRKIIRDHGDMTSRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVKV 120          
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Match: A0A0C2GGW2_9BILA (PRO8NT domain protein n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2GGW2_9BILA)

HSP 1 Score: 139 bits (349), Expect = 1.070e-40
Identity = 62/77 (80.52%), Postives = 71/77 (92.21%), Query Frame = 0
Query:    1 AKRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGALKFVPHAVYKLMENMPMPWEAVRNVRV 77
            +KRY +KRKFG VD  KEEMPPEHVRKIIRDHGDMTS+KFRHDKRVYLGALK++PHAV KL+ENMPMPWE +R+V+V
Sbjct:   14 SKRYAEKRKFGVVDTQKEEMPPEHVRKIIRDHGDMTSRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVKV 90          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101322.116.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3Y074_HETAK3.640e-4590.91Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5K085_9PHAE3.680e-4498.70MPN domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A078JR71_BRANA2.650e-4284.42BnaCnng61100D protein n=1 Tax=Brassica napus TaxID... [more]
A0A836C932_9STRA7.220e-4289.61NUC071 domain-containing protein n=1 Tax=Tribonema... [more]
A0A1R3KSZ0_COCAP7.300e-4283.12Pre-mRNA-processing-splicing factor 8 (Fragment) n... [more]
A0A314ZFU1_PRUYE1.010e-4184.42Pre-mRNA-processing-splicing factor 8A-like n=1 Ta... [more]
A0A4S8JER4_MUSBA1.130e-4184.42PRO8NT domain-containing protein n=1 Tax=Musa balb... [more]
A0A7C9B3B5_OPUST1.140e-4184.21PRO8NT domain-containing protein (Fragment) n=1 Ta... [more]
A0A183GXD1_HELPZ7.690e-4180.52PRO8NT domain-containing protein n=1 Tax=Heligmoso... [more]
A0A0C2GGW2_9BILA1.070e-4080.52PRO8NT domain protein n=1 Tax=Ancylostoma duodenal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012591PRO8NT domainPFAMPF08082PRO8NTcoord: 17..77
e-value: 3.8E-32
score: 111.3
IPR027652Pre-mRNA-processing-splicing factor 8PANTHERPTHR11140PRE-MRNA SPLICING FACTOR PRP8coord: 1..77
NoneNo IPR availablePANTHERPTHR11140:SF1coord: 1..77
NoneNo IPR availablePRODOMPD149576coord: 1..77
e-value: 6.0E-34
score: 355.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101322contigH-elongata_contig101322:1312..1542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101322.116.1mRNA_H-elongata_contig101322.116.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101322 1312..1542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101322.116.1 ID=prot_H-elongata_contig101322.116.1|Name=mRNA_H-elongata_contig101322.116.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=77bp
AKRYGQKRKFGFVDVYKEEMPPEHVRKIIRDHGDMTSKKFRHDKRVYLGA
LKFVPHAVYKLMENMPMPWEAVRNVRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012591PRO8NT
IPR027652PRP8