prot_H-elongata_contig101255.111.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101255.111.1
Unique Nameprot_H-elongata_contig101255.111.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length99
Homology
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 2.680e-37
Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    3 PRYVVVKLDGYTGPQWSDEDRCRDCIPIAPIQTSWTAPGQDNEGGTTTRTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAK 97
            P YVVVK +GY+G +WS ++R R C+PI+P+ T+W       +GGT  RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLT VCLS AK
Sbjct:  144 PLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTW------QDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAK 232          
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 6.760e-36
Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    3 PRYVVVKLDGYTGPQWSDEDRCRDCIPIAPIQTSWTAPGQDNEGGTTTRTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAK 97
            P YVVVK +GY+G +WS ++R R C+PI+P+ T+W       +GGT  RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLT VCLS AK
Sbjct:  318 PLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTW------QDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAK 406          
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 8.670e-36
Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    3 PRYVVVKLDGYTGPQWSDEDRCRDCIPIAPIQTSWTAPGQDNEGGTTTRTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAK 97
            P YVVVK +GY+G +WS ++R R C+PI+P+ T+W       +GGT  RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLT VCLS AK
Sbjct:   35 PLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTW------QDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAK 123          
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 5.430e-35
Identity = 63/95 (66.32%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    3 PRYVVVKLDGYTGPQWSDEDRCRDCIPIAPIQTSWTAPGQDNEGGTTTRTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAK 97
            P YVVVK +GY+G +WS ++R R C+PI+P+ T+W       +GGT  RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLT VCLS AK
Sbjct: 1449 PLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTW------QDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAK 1537          
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 2.520e-22
Identity = 47/58 (81.03%), Postives = 49/58 (84.48%), Query Frame = 0
Query:   41 GQDNE-GGTTTRTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAK 97
            GQ  E GGT  RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLT VCLS AK
Sbjct:    4 GQKGEDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAK 61          
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 8.600e-22
Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 0
Query:   45 EGGTTTRTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAK 97
            +GGT  RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLT VCLS AK
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAK 59          
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.770e-21
Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 0
Query:   45 EGGTTTRTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAK 97
            +GGT  RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLT VCLS AK
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAK 59          
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.810e-21
Identity = 46/61 (75.41%), Postives = 50/61 (81.97%), Query Frame = 0
Query:   37 WTAPGQDNEGGTTTRTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAK 97
            W+   +D  GGT  RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLT VCLS AK
Sbjct:   67 WSTGRKD--GGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAK 125          
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Match: A0A6H5K214_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K214_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.280e-21
Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 0
Query:   45 EGGTTTRTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAK 97
            +GGT  RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLT VCLS AK
Sbjct:    4 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAK 56          
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Match: A0A6H5KN08_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN08_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 1.750e-20
Identity = 44/53 (83.02%), Postives = 47/53 (88.68%), Query Frame = 0
Query:   45 EGGTTTRTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAK 97
            +GGT  RTQLPL+L WAITMHKSQGQTL+KAVIDLG KEACTGLT VCLS AK
Sbjct:    7 DGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAK 59          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101255.111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUS2_9PHAE2.680e-3766.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG8_9PHAE6.760e-3666.32Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K4U7_9PHAE8.670e-3666.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L976_9PHAE5.430e-3566.32ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]
A0A6H5KSF1_9PHAE2.520e-2281.03Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KFN2_9PHAE8.600e-2283.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCP5_9PHAE1.770e-2183.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMH2_9PHAE1.810e-2175.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K214_9PHAE3.280e-2183.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KN08_9PHAE1.750e-2083.02Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR23274:SF32ATP-DEPENDENT DNA HELICASE PIF1coord: 6..95
NoneNo IPR availablePANTHERPTHR23274DNA HELICASE-RELATEDcoord: 6..95
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 30..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101255contigH-elongata_contig101255:1268..1564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101255.111.1mRNA_H-elongata_contig101255.111.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101255 1268..1660 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101255.111.1 ID=prot_H-elongata_contig101255.111.1|Name=mRNA_H-elongata_contig101255.111.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=99bp
AQPRYVVVKLDGYTGPQWSDEDRCRDCIPIAPIQTSWTAPGQDNEGGTTT
RTQLPLKLFWAITMHKSQGQTLSKAVIDLGEKEACTGLTSVCLSHAKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase