prot_H-elongata_contig101102.100.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig101102.100.1
Unique Nameprot_H-elongata_contig101102.100.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length71
Homology
BLAST of mRNA_H-elongata_contig101102.100.1 vs. uniprot
Match: A0A6H5L8T9_9PHAE (Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L8T9_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 8.940e-15
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = 0
Query:    1 MCGMLSTEFYRPYFDVNTNEVKARLSQAAWPLRRTPLFLHTSNDDEGKSGSDGPKYPDLYGPVWVSVAL 69
            MCG+LS ++Y+PYFDV+T+EVK +L QA WP+R+T  FL      EG S        DLYGPVWV   L
Sbjct:   97 MCGLLSLQYYQPYFDVDTSEVKTKLLQAIWPMRKTASFL-----GEGDSSK-----VDLYGPVWVPATL 155          
BLAST of mRNA_H-elongata_contig101102.100.1 vs. uniprot
Match: G0R3I1_ICHMG (Protein YIPF n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0R3I1_ICHMG)

HSP 1 Score: 52.0 bits (123), Expect = 4.250e-6
Identity = 23/69 (33.33%), Postives = 36/69 (52.17%), Query Frame = 0
Query:    1 MCGMLSTEFYRPYFDVNTNEVKARLSQAAWPLRRTPLFLHTSNDDEGKSGSDGPKYPDLYGPVWVSVAL 69
            +CG L  E+Y+PYF++ +NE+K R+     P++  P FL+                PDL+GP W+   L
Sbjct:   61 ICGFLQLEYYQPYFNITSNEIKQRVKSCFLPIK--PDFLNIIKQK-----------PDLWGPFWILTTL 116          
BLAST of mRNA_H-elongata_contig101102.100.1 vs. uniprot
Match: A0A654HJ50_9CEST (Protein YIPF n=1 Tax=Sparganum proliferum TaxID=64606 RepID=A0A654HJ50_9CEST)

HSP 1 Score: 50.4 bits (119), Expect = 1.700e-5
Identity = 22/62 (35.48%), Postives = 32/62 (51.61%), Query Frame = 0
Query:    8 EFYRPYFDVNTNEVKARLSQAAWPLRRTPLFLHTSNDDEGKSGSDGPKYPDLYGPVWVSVAL 69
            +FY+ YFDV+TN+V  RL  + WP  +     ++               PDLYGP W++V L
Sbjct:   40 DFYKSYFDVDTNQVLKRLCSSVWPFSKECSLYNSLQPT-----------PDLYGPFWITVTL 90          
BLAST of mRNA_H-elongata_contig101102.100.1 vs. uniprot
Match: A0A7M3RM32_SPIER (Protein YIPF n=2 Tax=Spirometra erinaceieuropaei TaxID=99802 RepID=A0A7M3RM32_SPIER)

HSP 1 Score: 50.4 bits (119), Expect = 1.710e-5
Identity = 24/62 (38.71%), Postives = 34/62 (54.84%), Query Frame = 0
Query:    8 EFYRPYFDVNTNEVKARLSQAAWPLRRTPLFLHTSNDDEGKSGSDGPKYPDLYGPVWVSVAL 69
            +FY+ YFDV+TN+V  RL  + WP  +    L++S              PDLYGP W++V L
Sbjct:   45 DFYKSYFDVDTNQVLKRLCSSVWPFSKE-CSLYSSLQPT----------PDLYGPFWITVTL 95          
BLAST of mRNA_H-elongata_contig101102.100.1 vs. uniprot
Match: A0A8J2SR10_9STRA (Protein YIPF n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SR10_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 3.450e-5
Identity = 28/68 (41.18%), Postives = 32/68 (47.06%), Query Frame = 0
Query:    2 CGMLSTEFYRPYFDVNTNEVKARLSQAAWPLRRTPLFLHTSNDDEGKSGSDGPKYPDLYGPVWVSVAL 69
            C  LS  +YRPYFDV+T+EV ARL        R  LF           G      PD YGP WV+  L
Sbjct:   29 CACLSVAYYRPYFDVDTDEVAARL--------RAALFFCNEPFGATLRGK-----PDAYGPWWVATTL 83          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig101102.100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L8T9_9PHAE8.940e-1552.17Protein YIPF n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
G0R3I1_ICHMG4.250e-633.33Protein YIPF n=1 Tax=Ichthyophthirius multifiliis ... [more]
A0A654HJ50_9CEST1.700e-535.48Protein YIPF n=1 Tax=Sparganum proliferum TaxID=64... [more]
A0A7M3RM32_SPIER1.710e-538.71Protein YIPF n=2 Tax=Spirometra erinaceieuropaei T... [more]
A0A8J2SR10_9STRA3.450e-541.18Protein YIPF n=1 Tax=Pelagomonas calceolata TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039765Protein Yip5/YIPF1/YIPF2PANTHERPTHR12822UNCHARACTERIZEDcoord: 4..69
NoneNo IPR availablePANTHERPTHR12822:SF2PROTEIN YIPFcoord: 4..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig101102contigH-elongata_contig101102:2049..2261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig101102.100.1mRNA_H-elongata_contig101102.100.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig101102 2034..2261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig101102.100.1 ID=prot_H-elongata_contig101102.100.1|Name=mRNA_H-elongata_contig101102.100.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=71bp
MCGMLSTEFYRPYFDVNTNEVKARLSQAAWPLRRTPLFLHTSNDDEGKSG
SDGPKYPDLYGPVWVSVALF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039765Yip5/YIPF1/YIPF2