prot_H-elongata_contig100933.85.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100933.85.1
Unique Nameprot_H-elongata_contig100933.85.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length218
Homology
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Match: D7FNN0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNN0_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 3.350e-79
Identity = 137/223 (61.43%), Postives = 164/223 (73.54%), Query Frame = 0
Query:    1 DFSQDRYCLARSSASKFMVTQYGLCCFRYDGDGRLEARPFNAFITPSTYFGMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVIEEKIKTRWTREAAAASEKEDANAAAVDTESSLSTGKPAQPLIQA----TRDGTTFESLDEPEKNMIVDARKKVEALLAEMSGEKEYVERSVKLDPMNGRQRWLMYEFVGANTA-VKMSNLSGPHFARGIEV 218
            D  Q RY LAR S S+FM+TQYG+CCFRY  D RLEARPFN F+ PSTY G DRVYSCQASSM+FLS HGFDFQAW +HGVPFLSR++E V+E K++ RW REA  A+E+++A A                  ++      RDGTT ESL EPEK M+ DA KKVEALLAE S   EYV++SVKL+PMNGRQRWLMYEFVG++TA VK+SNL GP +AR +E+
Sbjct:   46 DSVQARYDLARGSCSQFMLTQYGICCFRYH-DERLEARPFNCFVVPSTYHGSDRVYSCQASSMDFLSKHGFDFQAWASHGVPFLSRAEEEVVEGKLRRRWEREATVAAERKEAVAXXXXXXXXXXXXXXXAAAVEGPVHTARDGTTIESLQEPEKGMVKDALKKVEALLAESSSGGEYVQKSVKLEPMNGRQRWLMYEFVGSSTADVKLSNLPGPAYARPMEI 267          
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Match: A0A507C5F1_9FUNG (RNA_bind domain-containing protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507C5F1_9FUNG)

HSP 1 Score: 90.9 bits (224), Expect = 1.430e-17
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 0
Query:    1 DFSQDRYCLARSSASKFMVTQYGLCCFRYDGDGRLE-ARPFNAFITPST----YFGMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVIEEKI 96
            D  Q+RY   R S+ KF +TQYG+CCF +D       +RPFN +I P++    +   +R + CQ  S+EFL+ +GFDF AW+ HG+P+ S   E  I  +I
Sbjct:   46 DTPQERYSKLRQSSQKFTITQYGVCCFIWDSQSASYISRPFNFYIFPASAKFPFNVYERNFMCQVGSLEFLAKNGFDFNAWIRHGIPYCSNESETYIRTQI 146          
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Match: A0A507EAB4_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507EAB4_9FUNG)

HSP 1 Score: 90.9 bits (224), Expect = 1.530e-17
Identity = 42/100 (42.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:    1 DFSQDRYCLARSSASKFMVTQYGLCCFRYDG-DGRLEARPFNAFITPST---YFGMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVIEEKI 96
            D  Q+RY   + SA  F  TQYGLC F +D    +  A+PFN ++ P+T     G+DR ++CQASS+ FL +  FDF  W++ G+P+++R +EA    KI
Sbjct:   46 DTVQERYAKCKMSAEAFQTTQYGLCTFSWDAAKHKYIAKPFNCYVFPATGNRVLGLDRHFTCQASSLSFLRDSKFDFNKWISQGIPYVNRDEEAKARRKI 145          
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Match: F4PBJ7_BATDJ (RNA_bind domain-containing protein n=3 Tax=Batrachochytrium dendrobatidis TaxID=109871 RepID=F4PBJ7_BATDJ)

HSP 1 Score: 88.2 bits (217), Expect = 1.270e-16
Identity = 44/102 (43.14%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    1 DFSQDRYCLARSSASKFMVTQYGLCCFRYDGD-GRLEARPFNAFITPST---YFGMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVIEEKIKT 98
            D  Q+RY   RS+A  F   Q GL  F++D + G   ++PFN  I P T   +FG+DR +  Q SS+EFL  +GFDF  W+  G+PF+S ++EA I +K++T
Sbjct:   46 DTPQERYLKHRSAARLFEPIQIGLAAFKWDAEQGVYMSKPFNFNIYPRTGNKFFGLDRTFCVQISSLEFLEGNGFDFNKWIREGIPFVSITEEAAIRKKLET 147          
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Match: A0A507EXB8_9FUNG (RNA_bind domain-containing protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507EXB8_9FUNG)

HSP 1 Score: 87.4 bits (215), Expect = 2.400e-16
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 0
Query:    1 DFSQDRYCLARSSASKFMVTQYGLCCFRYDGDGRLE-ARPFNAFITP---STYFGMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVIEEKI 96
            D  Q+RY   R SA  F+V Q+GLC F +D   ++  A+PFN ++ P   S   G+DR YS Q  S+EFL  + FDF  W++ G+PF++   EA + +KI
Sbjct:   46 DTVQERYEKIRRSAQNFLVIQFGLCTFTWDSGRKVYVAKPFNCYVFPQSGSRTLGLDRQYSLQIGSLEFLRGNKFDFNKWISQGIPFVNHDDEAEVRQKI 145          
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Match: A0A1S8W8V7_9FUNG (RNA_bind domain-containing protein n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W8V7_9FUNG)

HSP 1 Score: 86.3 bits (212), Expect = 5.900e-16
Identity = 44/101 (43.56%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    1 DFSQDRYCLARSSASKFMVTQYGLCCFRYDGDGRLE-ARPFNAFITP---STYFGMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVIEEKIK 97
            D  Q+RY   RSSA  F  TQ GL  F ++ +G+    + FN  I P   + +FG+DR ++ Q+SS+EFL+N+GFDF  WVA G+PF+S  +E  I  K++
Sbjct:   46 DTPQERYTKRRSSAMLFNPTQVGLATFCWNAEGKAYIVKSFNFNIFPRAGNKFFGLDRTFASQSSSLEFLNNNGFDFNKWVAEGIPFVSSVEEKAIRTKLE 146          
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Match: A0A662X7Q8_9STRA (DHHC domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X7Q8_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 1.660e-15
Identity = 36/99 (36.36%), Postives = 62/99 (62.63%), Query Frame = 0
Query:    1 DFSQDRYCLARSSASKFMVTQYGLCCFRYDGDGRLEARPFNAFITPSTYFGMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVIEEKIKTR 99
            D  ++RY   + S   F++TQ+GL     D D + + + +N ++ P  Y   D  + CQASS++FLS HGFDF  ++A G+PFL+ S+  V++++++ R
Sbjct:  100 DTLEERYRKVKRSGESFLITQFGLSTVHVDKDEQFQIKTWNFYVFPRPYGTQDERFLCQASSLQFLSEHGFDFNKFIADGIPFLNLSKTTVMKKRLQRR 198          
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Match: T0QZK7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QZK7_SAPDV)

HSP 1 Score: 81.6 bits (200), Expect = 2.280e-14
Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = 0
Query:    1 DFSQDRYCLARSSASKFMVTQYGLCCFRYDGDGRLEARPFNAFITPSTYFGMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVI 92
            D  ++RY   R+S   F++TQ+GL     + D +   + FN ++ P  Y  MD  + CQASS++F+S HGFDF  ++  G+P+++RS EA +
Sbjct:   79 DTLEERYAKVRASGENFLITQFGLALVHVEDD-KTWIKCFNFYVFPRPYANMDTRFLCQASSIQFMSEHGFDFNKFIRDGIPYMTRSNEAYV 169          
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Match: A0A3F2RN63_9STRA (Palmitoyltransferase n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RN63_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 2.560e-14
Identity = 35/99 (35.35%), Postives = 61/99 (61.62%), Query Frame = 0
Query:    1 DFSQDRYCLARSSASKFMVTQYGLCCFRYDGDGRLEARPFNAFITPSTYFGMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVIEEKIKTR 99
            D  ++RY   + +   F++TQ+GL     D   + + R +N +I P  Y  +D  + CQASSM+FLS HGFDF  ++  G+PF++ S+ A ++++++ R
Sbjct:   48 DTLEERYHKVKRAGESFLITQFGLSTVHLDQKDQFQIRTWNFYIFPRPYGSLDERFLCQASSMQFLSEHGFDFNKFIRDGIPFVNLSKTAGMKKRLQRR 146          
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Match: A0A067RCE4_ZOONE (Poly(A)-specific ribonuclease PARN-like domain-containing protein 1 n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067RCE4_ZOONE)

HSP 1 Score: 81.3 bits (199), Expect = 3.090e-14
Identity = 38/97 (39.18%), Postives = 59/97 (60.82%), Query Frame = 0
Query:    1 DFSQDRYCLARSSASKFMVTQYGLCCFRYDGD-GRLEARPFNAFITPSTYFGMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVIEEKI 96
            D S +RY   R S   F++ Q G+C FR+  D  + EA  +  +I P ++  +D  + CQASS+EFL  H FDF  +V  GVP+L++ QEA + +++
Sbjct:   47 DTSNERYDKLRRSVQHFIIMQIGICTFRFVQDKNKYEASRYTFYIFPKSFASVDNKFMCQASSLEFLCQHDFDFNKFVYEGVPYLNQQQEAHLRKQL 143          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100933.85.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNN0_ECTSI3.350e-7961.43Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A507C5F1_9FUNG1.430e-1741.58RNA_bind domain-containing protein n=2 Tax=Synchyt... [more]
A0A507EAB4_9FUNG1.530e-1742.00Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
F4PBJ7_BATDJ1.270e-1643.14RNA_bind domain-containing protein n=3 Tax=Batrach... [more]
A0A507EXB8_9FUNG2.400e-1642.00RNA_bind domain-containing protein n=2 Tax=Spizell... [more]
A0A1S8W8V7_9FUNG5.900e-1643.56RNA_bind domain-containing protein n=1 Tax=Batrach... [more]
A0A662X7Q8_9STRA1.660e-1536.36DHHC domain-containing protein n=2 Tax=Nothophytop... [more]
T0QZK7_SAPDV2.280e-1438.04Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A3F2RN63_9STRA2.560e-1435.35Palmitoyltransferase n=2 Tax=Phytophthora kernovia... [more]
A0A067RCE4_ZOONE3.090e-1439.18Poly(A)-specific ribonuclease PARN-like domain-con... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..148
e-value: 4.0E-24
score: 87.2
IPR006941Ribonuclease CAF1PFAMPF04857CAF1coord: 4..147
e-value: 3.8E-27
score: 95.3
NoneNo IPR availablePANTHERPTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1coord: 4..197
NoneNo IPR availablePANTHERPTHR15092:SF22POLY(A)-SPECIFIC RIBONUCLEASE PARNcoord: 4..197
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 3..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100933contigH-elongata_contig100933:1237..2151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100933.85.1mRNA_H-elongata_contig100933.85.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100933 1237..2151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100933.85.1 ID=prot_H-elongata_contig100933.85.1|Name=mRNA_H-elongata_contig100933.85.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=218bp
DFSQDRYCLARSSASKFMVTQYGLCCFRYDGDGRLEARPFNAFITPSTYF
GMDRVYSCQASSMEFLSNHGFDFQAWVAHGVPFLSRSQEAVIEEKIKTRW
TREAAAASEKEDANAAAVDTESSLSTGKPAQPLIQATRDGTTFESLDEPE
KNMIVDARKKVEALLAEMSGEKEYVERSVKLDPMNGRQRWLMYEFVGANT
AVKMSNLSGPHFARGIEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR006941RNase_CAF1
IPR012337RNaseH-like_sf