prot_H-elongata_contig100713.64.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100713.64.1
Unique Nameprot_H-elongata_contig100713.64.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length172
Homology
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BLAST of mRNA_H-elongata_contig100713.64.1 vs. uniprot
Match: D8LE69_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE69_ECTSI)

HSP 1 Score: 247 bits (631), Expect = 1.760e-73
Identity = 128/175 (73.14%), Postives = 140/175 (80.00%), Query Frame = 0 
Query:    1 RYENEAQLSHLFPATDGCFVGMSPQG--EPSALLIEGGGYLAAVYSVPDMHLRGRKALSLPVTRVLSTPECLGSQRGKVLYVVRSPCSPSVFLETMVYSDRGGLQCPEPLLPV-RVGDGXXXXXXXXXMSSAWGGGRPYANAHVVLEANERVVDVKFQPLHTVAELSAWGYRVSG 172
            RYENEAQLSHLFPATDGCFV  S     EPSALL+EGGGYLAAVYS+PDM + GRKALSLPVTRV++TPECLG QRGKVLYVVRSP +PS FLETMVYSDRGGLQCPEPLLPV   G+G         ++  W GGRPYANAH+VLE +ERVVD KFQ L TV EL+ WGYR  G
Sbjct:  281 RYENEAQLSHLFPATDGCFVSTSANAGAEPSALLVEGGGYLAAVYSIPDMQMLGRKALSLPVTRVIATPECLGPQRGKVLYVVRSPHTPSGFLETMVYSDRGGLQCPEPLLPVVSQGEGGG-------VAPGWAGGRPYANAHLVLEPSERVVDAKFQQLTTVTELATWGYRRGG 448
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BLAST of mRNA_H-elongata_contig100713.64.1 vs. uniprot
Match: A0A6H5KK27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK27_9PHAE)

HSP 1 Score: 175 bits (444), Expect = 1.380e-48
Identity = 97/174 (55.75%), Postives = 109/174 (62.64%), Query Frame = 0 
Query:    1 RYENEAQLSHLFPATDGCFVGMSPQG--EPSALLIEGGGYLAAVYSVPDMHLRGRKALSLPVTRVLSTPECLGSQRGKVLYVVRSPCSPSVFLETMVYSDRGGLQCPEPLLPVRVGDGXXXXXXXXXMSSAWGGGRPYANAHVVLEANERVVDVKFQPLHTVAELSAWGYRVSG 172
            RYENEAQLSHLFPATDGCFV  S     EPSALL+EGGGYLAAVYS+PDM + GRKALSLPVTRV++TPECLG QRGKV+                  S  GG                        ++  W GGRPYANAH+VLE +ERVV+ KFQ L T  EL+ WGYR SG
Sbjct:    3 RYENEAQLSHLFPATDGCFVSTSANAGAEPSALLVEGGGYLAAVYSIPDMQMLGRKALSLPVTRVIATPECLGPQRGKVV------------------SQGGG----------------------GGVAPGWAGGRPYANAHLVLEPSERVVEAKFQQLTTATELATWGYRRSG 136
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100713.64.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE69_ECTSI1.760e-7373.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK27_9PHAE1.380e-4855.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100713contigH-elongata_contig100713:58..2079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100713.64.1mRNA_H-elongata_contig100713.64.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100713 58..2079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100713.64.1 ID=prot_H-elongata_contig100713.64.1|Name=mRNA_H-elongata_contig100713.64.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=172bp
RYENEAQLSHLFPATDGCFVGMSPQGEPSALLIEGGGYLAAVYSVPDMHL
RGRKALSLPVTRVLSTPECLGSQRGKVLYVVRSPCSPSVFLETMVYSDRG
GLQCPEPLLPVRVGDGGGGGEGGGAMSSAWGGGRPYANAHVVLEANERVV
DVKFQPLHTVAELSAWGYRVSG
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