prot_H-elongata_contig100496.50.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100496.50.1
Unique Nameprot_H-elongata_contig100496.50.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
BLAST of mRNA_H-elongata_contig100496.50.1 vs. uniprot
Match: D8LP13_ECTSI (Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP13_ECTSI)

HSP 1 Score: 73.9 bits (180), Expect = 2.960e-14
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 VWRQQTAVRLLCMNVENLFLFFVQRLSNLAGSRRFHNDALRANG 44
            VWR +TA+RLLC +V+ LFLFF QRL+NLAGSRR HNDALRANG
Sbjct: 1743 VWRHRTAIRLLCTSVDGLFLFFAQRLANLAGSRRTHNDALRANG 1786          
BLAST of mRNA_H-elongata_contig100496.50.1 vs. uniprot
Match: A0A6H5KXM7_9PHAE (Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXM7_9PHAE)

HSP 1 Score: 73.9 bits (180), Expect = 2.970e-14
Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0
Query:    1 VWRQQTAVRLLCMNVENLFLFFVQRLSNLAGSRRFHNDALRANG 44
            VWR +TA+RLLC +V+ LFLFF QRL+NLAGSRR HNDALRANG
Sbjct:  421 VWRHRTAIRLLCTSVDTLFLFFAQRLANLAGSRRTHNDALRANG 464          
BLAST of mRNA_H-elongata_contig100496.50.1 vs. uniprot
Match: A0A7S3URI4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URI4_HETAK)

HSP 1 Score: 51.2 bits (121), Expect = 2.930e-6
Identity = 22/43 (51.16%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    2 WRQQTAVRLLCMNVENLFLFFVQRLSNLAGSRRFHNDALRANG 44
            W+   ++ +L  +V++LFLFF QRL+NLAG+RR +N+ LR NG
Sbjct:   67 WQNLASIYILFTDVDSLFLFFAQRLANLAGARRMYNERLRENG 109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100496.50.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LP13_ECTSI2.960e-1477.27Vacuolar protein 8 n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5KXM7_9PHAE2.970e-1477.27Vacuolar protein 8 n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A7S3URI4_HETAK2.930e-651.16Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100496contigH-elongata_contig100496:1380..1511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100496.50.1mRNA_H-elongata_contig100496.50.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100496 1380..1511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100496.50.1 ID=prot_H-elongata_contig100496.50.1|Name=mRNA_H-elongata_contig100496.50.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
VWRQQTAVRLLCMNVENLFLFFVQRLSNLAGSRRFHNDALRANG
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