prot_H-elongata_contig100425.44.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig100425.44.1
Unique Nameprot_H-elongata_contig100425.44.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length310
Homology
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 1.950e-81
Identity = 138/308 (44.81%), Postives = 194/308 (62.99%), Query Frame = 0
Query:    1 MMVGVHVDYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDWENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEFGDYRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYVNATKEIGLRFVRG--SGLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISWKSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFGDSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSRDIQILHVGTKDQHVDILTKAL 306
            M++ VHVD I   G+ + CD F  +L E  PVK+ GEL+ Y+ C +ERD E G++ I+Q+ FAE +  +YGI    ++P    + L    E    +D  F   R LVGSLMW++   RPDIANA+RA AR+  +P   HWKA L I  YV  T  +G+ F RG  +G+ + VF DADYA+ + +RRSVSG  V+ G   ++W S TQKCVT +T E EYV + D  K+ +F R V  F+ P  +  C+ +F D++GA+ I +NP + S SK+ID++ HFI+ELV  ++I I HV T+ QH D LTKA+
Sbjct:   56 MIIVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEASADVPF---RELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAI 360          
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 1.170e-80
Identity = 138/308 (44.81%), Postives = 193/308 (62.66%), Query Frame = 0
Query:    1 MMVGVHVDYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDWENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEFGDYRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYVNATKEIGLRFVRG--SGLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISWKSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFGDSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSRDIQILHVGTKDQHVDILTKAL 306
            M++ VHVD I   G+ + CD F  +L E  PVK+ GEL+ Y+ C +ERD E G++ I+Q+ FAE +  +YGI    ++P    + L    E    +D  F   R LVGSLMW++   RPDIANA+RA AR+  +P   HWKA L I  YV  T  +G+ F RG  +G+ + VF DADYA+ + +RRSVSG  V+ G   ++W S TQKCVT +T E EYV + D  K+ +F R V  F+ P     C+ +F D++GA+ IA+NP + S SK+ID++ HFI+ELV  ++I I +V T  QH D LTKA+
Sbjct:    1 MIMVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEACADVPF---RELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAI 305          
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 259 bits (663), Expect = 1.650e-80
Identity = 139/308 (45.13%), Postives = 193/308 (62.66%), Query Frame = 0
Query:    1 MMVGVHVDYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDWENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEFGDYRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYVNATKEIGLRFVRG--SGLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISWKSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFGDSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSRDIQILHVGTKDQHVDILTKAL 306
            M++ VHVD I   G+ + CD F  +L E  PVK+ GEL+ Y+ C +ERD E G++ I+Q+ FAE +  +YGI    ++P    + L    E    +D  F   R LVGSLMW++   RPDIANA+RA AR+  +P   HWKA L I  YV  T  +G+ F RG  +G+ + VF DADYA+ + +RRSVSG  V+ G   ++W S TQKCVT +T E EYV + D  K+ +F R V  F+ P     C+ +F D++GA+ IA+NP + S SK+ID++ HFI+ELV  ++I I HV T  QH D LTKA+
Sbjct:  118 MIIVVHVDDIFAVGQKERCDKFGEDLNEMVPVKNLGELRWYSACFYERDVERGLLRISQQRFAEELAAEYGIEWGRSVPLPVSVKLTDFDENEACADVPF---RELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAI 422          
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 2.330e-80
Identity = 140/306 (45.75%), Postives = 194/306 (63.40%), Query Frame = 0
Query:    5 VHVDYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDWENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEFGD--YRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYVNATKEIGLRFVRGS--GLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISWKSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFGDSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSRDIQILHVGTKDQHVDILTKAL 306
            VHVD I   GE + CD F  +L    PVK+ G+L+ Y+GC +ERDW+ G ++I+Q+T+AE +  ++G+     IP   G+ L    +     D+E     +R L+GSLMW++   RPDIANA+RA AR+  +P   HW+A L I  YV  T ++G+ F RGS  GL + VF DADYA+ + +RRSVSG  V+ G   ISW S TQKCVT +T E EYV L D  K+ +F R V  F+ P+    C+ +F D++GA+ +A NP S S SK+ID++ HFI+ELV  ++I I HV +  QH D LTKAL
Sbjct:  122 VHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 422          
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 8.370e-80
Identity = 132/302 (43.71%), Postives = 196/302 (64.90%), Query Frame = 0
Query:    8 DYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDWENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEFGD---YRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYVNATKEIGLRFVRGSGLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISWKSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFGDSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSRDIQILHVGTKDQHVDILTKAL 306
            D I+V+G  D C    + L + FP K  GE   + GCA ERD E G + I+Q  + ++++ ++ +   S+IPAS G+D+G +       DDE G     R  +GS+MW+S   RPDI+ A+RA ARH+H P  RHWKA+++I AY+  T+++G+ + RGSGL L+V+ DA YA  + +RRSVSG+A  +G T IS  S TQ  V+ ++ E EY+   +  K+A+F R VL F+ P+ +G  + +  D++GAMA+  NP S++RSK+ID+++HFI+ L RS DI I  V T +QH D+LTKAL
Sbjct:  198 DXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPK------RDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYAD-AEDRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKAL 492          
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Match: A0A6H5KQB8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQB8_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 1.900e-78
Identity = 140/306 (45.75%), Postives = 194/306 (63.40%), Query Frame = 0
Query:    5 VHVDYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDWENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEFGD--YRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYVNATKEIGLRFVRGS--GLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISWKSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFGDSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSRDIQILHVGTKDQHVDILTKAL 306
            VHVD I   GE + CD F  +L    PVK+ G+L+ Y+GC +ERDW+ G ++I+Q+T+AE +  ++G+     IP   G+ L    +     D+E     +R L+GSLMW++   RPDIANA+RA AR+  +P   HW+A L I  YV  T ++G+ F RGS  GL + VF DADYA+ + +RRSVSG  V+ G   ISW S TQKCVT +T E EYV L D  K+ +F R V  F+ P+    C+ +F D++GA+ +A NP S S SK+ID++ HFI+ELV  ++I I HV +  QH D LTKAL
Sbjct:  296 VHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKAL 596          
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 251 bits (640), Expect = 8.870e-77
Identity = 132/304 (43.42%), Postives = 190/304 (62.50%), Query Frame = 0
Query:    5 VHVDYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDWENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEFGDYRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYVNATKEIGLRFVRGS--GLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISWKSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFGDSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSRDIQILHVGTKDQHVDILTKAL 306
            VHVD I   GE + CD F ++L +  PVK+ GEL+ Y+GC +ER+ E G + I+Q+TF + +  +YG+    ++P SSG+ L         ++  F   R LVGSLMW++   RPDIANA+RA AR+  +P   HW A + I  Y   T   G+ F RG+  G  L  +ADAD+A+ + +RRSVSG  V  G  A+SW S TQKCVT +T E EYV L D  K+ +F R +  F+ PQ+   C+ +F D++GA+ +A NP S S SK+ID++ HF++ELV  ++I ++HV +  Q  D LTK+L
Sbjct:  146 VHVDDIFAVGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPF---RELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSL 446          
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Match: A0A6H5KR24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR24_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 9.650e-76
Identity = 139/307 (45.28%), Postives = 190/307 (61.89%), Query Frame = 0
Query:    5 VHVDYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDWENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEFGD--YRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYVNATKEIGLRFVRGS--GLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISWKSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFGDSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSR-DIQILHVGTKDQHVDILTKAL 306
            VHVD I   GE +  D F  +L     VK+ G+L  Y+GC +ERDW+ G ++I+Q+T+AE +  ++G+     IP   GM L    +     D+E     +R L+GSLMW++   RPDIANA+RA AR+  +P   HW+A L I  YV  T + G+ F RGS  GL + VFADADYA+ + +RRSVSG  V+ G   ISW S TQKCVT +T E EYV L D  K+ +F R V  F+ P+    C+ +F D++GA+ +A NP S S  K+ID++ HFI+ELV  R +I I HV +  QH D LT+AL
Sbjct:   21 VHVDDIFSIGEEERYDQFGRDLNTMVRVKNLGDLIWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGMKLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDSGITFRRGSIAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNLKHIDVRHHFIRELVVGRKEISIFHVESAYQHADFLTRAL 322          
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Match: A0A6H5K2R1_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2R1_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 1.210e-74
Identity = 139/306 (45.42%), Postives = 194/306 (63.40%), Query Frame = 0
Query:    5 VHVDYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDWENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEFGD--YRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYVNATKEIGLRFVRGS--GLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISWKSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFGDSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSRDIQILHVGTKDQHVDILTKAL 306
            VHVD I   GE + CD F  +L    PVK+ G+L+ Y+GC +ERDW+ G ++I+Q+T+AE +  ++G+     IP   G+ L    +     D+E     +R L+GSLMW++   RPDIANA+RA AR+  +P   HW+A L I  YV  T ++G+ F RGS  GL + VF DADYA+ + +RRSVSG  V+ G   ISW S TQKCVT +T E EYV L D  K+ +F R V  F+ P+    C+ +F D++GA+ +A NP S S SK+ID++ HFI+ELV  ++I I HV +  QH + LTKAL
Sbjct:  817 VHVDDIFSIGEEERCDQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQ-----DEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHAEFLTKAL 1117          
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Match: A0A6H5JHY5_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHY5_9PHAE)

HSP 1 Score: 259 bits (661), Expect = 1.360e-74
Identity = 137/308 (44.48%), Postives = 195/308 (63.31%), Query Frame = 0
Query:    1 MMVGVHVDYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDWENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEFGDYRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYVNATKEIGLRFVRG--SGLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISWKSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFGDSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSRDIQILHVGTKDQHVDILTKAL 306
            M++ VHVD I   G+ + CD F S+L E  PVK+ GEL+ Y+ C ++RD E G++ I+Q+ FAE +  +YG+    ++P    + L    E    +D  F   R LVGSLMW++   RPDIANA+RA AR+  +P   HWKA L I  YV  T  +G+ F RG  +G+ + VF DADYA+ + +RRSVSG  V+ G   ++W S TQKCVT +T E EYV + D  K+ +F R V  F+ P     C+ +F D++GA+ IA+NP + S SK+ID++ HFI+ELV  ++I I HV ++ QH D LTKA+
Sbjct: 1152 MIIVVHVDDIFAVGQKERCDKFGSDLNEMVPVKNLGELRWYSACFYQRDLERGLLRISQQRFAEELAAEYGVEWGKSVPLPVSVKLTDFDENEACADVPF---RELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADYASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAI 1456          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig100425.44.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4G9_9PHAE1.950e-8144.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KP70_9PHAE1.170e-8044.81Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEF2_9PHAE1.650e-8045.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE2.330e-8045.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JCG0_9PHAE8.370e-8043.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQB8_9PHAE1.900e-7845.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFG2_9PHAE8.870e-7743.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KR24_9PHAE9.650e-7645.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2R1_9PHAE1.210e-7445.42Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5JHY5_9PHAE1.360e-7444.48Integrase catalytic domain-containing protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 102..309
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 102..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig100425contigH-elongata_contig100425:1456..2385 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig100425.44.1mRNA_H-elongata_contig100425.44.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig100425 1456..2385 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig100425.44.1 ID=prot_H-elongata_contig100425.44.1|Name=mRNA_H-elongata_contig100425.44.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=310bp
MMVGVHVDYIIVSGESDVCDAFFSELKERFPVKHQGELKMYTGCAFERDW
ENGIVEINQKTFAENMITQYGITDVSNIPASSGMDLGLRVEGGTGSDDEF
GDYRALVGSLMWISVMIRPDIANALRACARHSHNPTARHWKALLRIAAYV
NATKEIGLRFVRGSGLRLSVFADADYAAVSNNRRSVSGVAVLLGDTAISW
KSSTQKCVTTATCETEYVVLCDAAKKAIFDRVVLVFLQPQLAGICVDIFG
DSEGAMAIANNPSSASRSKYIDLKFHFIQELVRSRDIQILHVGTKDQHVD
ILTKALWRKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like