mRNA_H-elongata_contig99831.17301.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE) HSP 1 Score: 458 bits (1178), Expect = 3.130e-142 Identity = 266/530 (50.19%), Postives = 330/530 (62.26%), Query Frame = 1
Query: 10 MFMEVGGEVAARHEALVSALRAAVETGFPEGHVAELEEIILGECFDAFRRALT-GEPPARVAPMRVTLKQGADLTQVKAKPRVYPPEKSTWLTEHFELLCETGMVYPNPQAVCASVAMAFTKGPGKGYRLVADFSPINVQCELVPGPMLNPEIEGEKCAGAVAFCTMDCLQGYCQCPLAKEAREYFTLVTRDGLFTPTRVPQEVMNATSYFQGMMMEVLGDLVGRACLIYVDDVKVIGRSVEDLIVYLRSVLLRLMKRGLFLAAHTLVRFATEVTWCGKLDSGTAVRHDPERVRGLEEMRRPETVGELMQILQATNWMRLSLPHMAEIVAPLRALMELRLKGT-SRTKRVASRRALTDGDWTLERVEAWDNSRGMLMNAVELSFRRADDCRALMFPDASDLFWGCCLTQVPKEDLVAGLSFMDMSHEPLAFLSGP----------TVDKESFAILSAFQRVPYLLWDGSNIFCDHRNLAYIFSPQSCGVTLSKAASQRLAGWRACMRQFNYVIQHIPGEENHWGDLLSRW 1563
M M E +AR +L SA+ +A G E HV L II E ++AFRR L G+PPA V P+RVTLK GA VKA+PRVY P K+ WL G+V+ N QAV AS AMA K G YRLV+DF N Q E VPG M NPE + + A + ++D LQ Y QCPLA EA+E FT+ T GL+TP RVPQ ++NATSYFQ + +L G C ++VDDV G +DL+ L +L RL GL++AAH F T +TWCGK+ S V HDPER+ GL MRRPET GELMQ LQA NW+R SLP MAE+V PLR +E L G SRTKRVA RA+ T VEAW ++ ++ AV LS + C LMFPDASD WG LTQVP++ L G+ DM+HEP+ FLSG TVDKE +AI+S F+R+ YLLWD +IF DHRNLAYIF P++C ++K +QRL W+A + Q++Y I+HI GE N WGDLLSRW
Sbjct: 695 MDMSPEEEASARSASLDSAVSSAAAAGLEEPHVGRLRGII-SERWNAFRRGLRHGDPPANVEPLRVTLKPGA--RPVKARPRVYNPIKTAWLAG-------LGLVFLNMQAVWASAAMATPKKGG--YRLVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILD---GLNCFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAHKCTFFETSITWCGKVYSEGQVEHDPERLSGLATMRRPETAGELMQFLQAVNWLRTSLPRMAEVVWPLRVFLEQHLVGAKSRTKRVAENRAIAADALTPALVEAWTAAQDLVARAVALS-HPSPGCAVLMFPDASDEHWGSFLTQVPQDQLDRGVPVEDMAHEPMGFLSGTFKGAQQQRWATVDKEGYAIVSTFKRLEYLLWDSVHIFTDHRNLAYIFDPEACVSAVAKTTAQRLDQWKAVLGQYDYTIRHISGERNCWGDLLSRW 1208
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 449 bits (1155), Expect = 2.360e-139 Identity = 251/530 (47.36%), Postives = 326/530 (61.51%), Query Frame = 1
Query: 10 MFMEVGGEVAARHEALVSALRAAVETGFPEGHVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLTQVKAKPRVYPPEKSTWLTEHFELLCETGMVYPNPQAVCASVAMAFTKGPGKG--YRLVADFSPINVQCELVPGPMLNPEIEGEKCAGAVAFCTMDCLQGYCQCPLAKEAREYFTLVTRDGLFTPTRVPQEVMNATSYFQGMMMEVLGDLVGRACLIYVDDVKVIGRSVEDLIVYLRSVLLRLMKRGLFLAAHTLVRFATEVTWCGKLDSGTAVRHDPERVRGLEEMRRPETVGELMQILQATNWMRLSLPHMAEIVAPLRALMELRLKGT-SRTKRVASRRALTDGDWTLERVEAWDNSRGMLMNAVELSFRRADDCRALMFPDASDLFWGCCLTQVPKEDLVAGLSFMDMSHEPLAFLSGP---------TVDKESFAILSAFQRVPYLLWDGSNIFCDHRNLAYIFSPQSCGVTLSKAASQRLAGWRACMRQFNYVIQHIPGEENHWGDLLSRW 1563
M M E A R +AL A+ +A + G + L +++ F+ FRR + G+PPA V PM V LK GA VKA+ R Y P+K+ WLT L G+VY N QA+ AS M K G YR V DF +N Q E PGPM + E + ++ + A + ++D LQGY PLA EA+E FT++ GL++P RVPQ V+NATSY+QG M +L DL C+++VDD+ G + EDL+ L +L R GLF+AAH + T V WCGK+ S + HD +R+ GL +RRPET GELMQ LQA NW+R SLP M+EIVAPLR +EL + G +RTKRVAS RA+ WT VE+W+ ++ M+ NAV L A LMFPDASD WG +TQVP+ ++ + DMSHEPL FLSG TVDKE FAI+S F+R+ YLLW G +I DHRNLAYIF P++C T+ K +QRL W+A + Q++Y IQHI GE N WGDLLSRW
Sbjct: 587 MVMTPAEEEAGRADALDRAVDSAADAGLSPWGLDRLRQVV-DRRFNVFRRGVRGDPPANVPPMTVKLKTGAK--PVKARLRTYNPDKTKWLTTCLAALVALGLVYVNLQAIWASAIMLTPKRSGDKVTYRFVGDFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDL---NCIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVNWLRTSLPRMSEIVAPLREFLELHMAGNPNRTKRVASNRAIAPDAWTPAMVESWERAQDMVANAVTLYHPVAGKA-VLMFPDASDEHWGSFVTQVPQSEVDNNVPVEDMSHEPLGFLSGTFRGSQLRWATVDKEGFAIISTFRRLEYLLWGGVHIHTDHRNLAYIFDPEACISTVPKTTAQRLENWKAVLGQYDYTIQHISGERNCWGDLLSRW 1109
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Match: A0A6A3I3R6_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3I3R6_9STRA) HSP 1 Score: 310 bits (794), Expect = 1.490e-91 Identity = 185/493 (37.53%), Postives = 273/493 (55.38%), Query Frame = 1
Query: 145 DAFRRALTGEPPARVAPMRVTLKQGADLTQVKAKPRVYPPEKSTWLTEHFELLCETGMVYPNPQAVCASVAMAFTK-----GPGKGYRLVADFSPINVQCELVPGPMLNPEIEGEKCAGAVAFCTMDCLQGYCQCPLAKEAREYFTLVTRDGLFTPTRVPQEVMNATSYFQGMMMEVLGDLVGRACLIYVDDVKVIGRSVEDLIVYLRSVLLRLMKRGLFLAAHTLVRFATEVTWCGKLDSGTAVRHDPERVRGLEEMRRPETVGELMQILQATNWMRLSLPHMAEIVAPLRALME--LRLKGTSRTKRVASRRALTDGDWTLERVEAWDNSRGMLMNAVELSFRR--ADDCRALMFPDASDLFWGCCLTQVPKEDLVAGLSFMDMSHEPLAFLSG---------PTVDKESFAILSAFQRVPYLLWD--GSNIFCDHRNLAYIFSPQSCGVTLSKAASQRLAGWRACMRQFNYVIQHIPGEENHWGDLLSRW 1563
D FR +PP RV P++V LK G + VKA+PR Y P +L H L + G+VY N ++ AS K P R+ D +N + E +P PM E+ + GA F +D +GY Q PL +++E F+ VT G++TPTRVP +A +Y QG++ E+ GDL+G+ L ++DD+ + E+L+ L V +R K GL L A + FATEV WCG++ S V+H PER++GL +M+ P T GEL Q + A NWMR S+P + + A L +E ++ G+ + ++A R L + W +++ R L+ V L+ R A+ C ++ DAS FWG LTQ+ + A L + H+PLAFLSG T++KE+FAI+ A +R+ YLL G ++ DHRNL YIF+P + +++ + +L W + F YVI+H+PGEEN WGDLLSRW
Sbjct: 20 DCFRVEFGNDPPVRVVPLKVRLKDG--VRPVKAQPRRYSPTDREFLDRHTRALLDNGLVYLNHRSCWASAPNIVRKKEQDVDPSADPRMTIDSRGVNERTEAMPWPMPVLEVVIGELEGAKYFFVLDWFRGYWQLPLHPDSQELFSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGQGLLCWLDDILGYAETEEELLALLEKVSVRCEKFGLKLHAKKCLFFATEVKWCGRIISAEGVKHCPERIQGLVDMQPPRTAGELQQFVCAANWMRQSIPEYSRLSAALYEALERAAQVAGSRKQNKLAKVR-LDEVGWHDTEASSFEAVRAALLRMVPLAHPRPTAEVC---LYTDASQDFWGAVLTQLKPGE--AELPLTEQQHQPLAFLSGRFVGASSRWSTIEKEAFAIVEATRRLEYLLLRPAGFRLYTDHRNLVYIFNPYATDGAMARYRADKLQRWALSLMSFKYVIEHVPGEENVWGDLLSRW 504
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Match: A0A6G0WP68_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP68_9STRA) HSP 1 Score: 309 bits (792), Expect = 7.280e-91 Identity = 195/518 (37.64%), Postives = 276/518 (53.28%), Query Frame = 1
Query: 49 EALVSALRAAVETGFPEGHVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLTQVKAKPRVYPPEKSTWLTEHFELLCETGMVYPNPQAVCASVAMAFTK-GPGKGYRLVADFSPINVQCELVPGPMLNPEIEGEKCAGAVAFCTMDCLQGYCQCPLAKEAREYFTLVTRDGLFTPTRVPQEVMNATSYFQGMMMEVLGDLVGRACLIYVDDVKVIGRSVEDLIVYLRSVLLRLMKRGLFLAAHTLVRFATEVTWCGKLDSGTAVRHDPERVRGLEEMRRPETVGELMQILQATNWMRLSLPHMAEIVAPLRALMELRLKGTSRTKRVASRRA-LTDGDWTLERVEAWDNSRGMLMNAVELSFRRADDCRALMFPDASDLFWGCCLTQVPKEDLVAGLSFMDMSHEPLAFLSG---------PTVDKESFAILSAFQRVPYLLW--DGSNIFCDHRNLAYIFSPQSCGVTLSKAASQRLAGWRACMRQFNYVIQHIPGEENHWGDLLSRW 1563
E L + AVE G P G V EL I L D FR +PP +VAP++V LK+GA VK R YPP +L +H L G++Y N +A A+ K PG+ YR+ + PIN E +P PM N E G F T+D L+GY Q PL E + +++ +T G++TPT++ +A ++ Q ++ E+ GDL+ + L ++DD+ RS E L+V L VL + L + + E WCGK+ S + HDP RV+ L EM+ P T EL Q L ATNWMR S+P A+ V PLR L+++ K K+ A +A L WT E E ++ + L V L+ ++D +F DAS WG TQVPKEDL L+ HEPLAFLSG P ++KE++A++ + +R+ YLL G +F DHRNL YIF+P+ +++ + +L W M F Y ++H+ GE N WGDLLSRW
Sbjct: 543 EVLEQKVAEAVEQGLPPGQVDELRRI-LRAYQDVFRLDFGKDPPVKVAPLKVRLKEGA--VPVKVGLRRYPPAHMDYLRQHVAELEAAGLIYRNNRATWAAAPRIVPKKNPGE-YRMTIESRPINAWTETMPWPMPNLEAAMATLVGMEVFFTLDWLKGYWQLPLHPECQMWYSFMTPFGVYTPTKILMGQTDAVAFCQSVVNELFGDLMYQGVLGWLDDLLGYARSAEQLLVLLEKVLHICQEYRLKMHPKKCDFYLKEAKWCGKVISSEGISHDPSRVQRLCEMKAPTTAAELQQFLCATNWMRASIPLYAQRVDPLRRLLDVATKIAGSAKKTALAKADLAVARWTAEHDECFEEVKATLARMVPLA-HPSEDKAICLFTDASADHWGAACTQVPKEDLE--LTVDKERHEPLAFLSGSFTGASSRWPVIEKEAYAVVESCKRLEYLLLRQQGFRLFTDHRNLLYIFNPRGYDSGMARYQAHKLQRWAMVMATFPYTLEHVAGEANVWGDLLSRW 1053
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Match: A0A6G0WYM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYM7_9STRA) HSP 1 Score: 310 bits (793), Expect = 4.400e-90 Identity = 196/518 (37.84%), Postives = 274/518 (52.90%), Query Frame = 1
Query: 49 EALVSALRAAVETGFPEGHVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLTQVKAKPRVYPPEKSTWLTEHFELLCETGMVYPNPQAVCASVAMAFTK-GPGKGYRLVADFSPINVQCELVPGPMLNPEIEGEKCAGAVAFCTMDCLQGYCQCPLAKEAREYFTLVTRDGLFTPTRVPQEVMNATSYFQGMMMEVLGDLVGRACLIYVDDVKVIGRSVEDLIVYLRSVLLRLMKRGLFLAAHTLVRFATEVTWCGKLDSGTAVRHDPERVRGLEEMRRPETVGELMQILQATNWMRLSLPHMAEIVAPLRALMELRLKGTSRTKRVASRRA-LTDGDWTLERVEAWDNSRGMLMNAVELSFRRADDCRALMFPDASDLFWGCCLTQVPKEDLVAGLSFMDMSHEPLAFLSG---------PTVDKESFAILSAFQRVPYLLW--DGSNIFCDHRNLAYIFSPQSCGVTLSKAASQRLAGWRACMRQFNYVIQHIPGEENHWGDLLSRW 1563
E L + AVE G P G V EL I L D FR +PP +VAP++V LK+GA VK R YPP +L +H L G++Y N +A A+ K PG+ YR+ D PIN E +P PM N E G F T+D L+GY Q PL E + +++ +T G++TPTR+ +A ++ Q ++ E+ GDL+ + L ++DD+ RS E L+V L VL + L L + E WCGK+ S + HDP RV+GL EM+ P T EL Q L ATNWMR S+P A+ V PLR L+++ K K+ A + L WT E E ++ + L V L+ ++D +F DAS WG TQVPK DL L+ HE LAFLSG P ++KE++A++ + +R+ YLL G +F DHRNL YIF+P+ +++ + +L W M F Y ++H+ GE N WGDLLSRW
Sbjct: 42 EVLEQKVAEAVEQGLPPGQVDELRRI-LRAYQDVFRLDFGKDPPVKVAPLKVRLKEGA--VPVKVGLRRYPPAHMDYLRQHVAELEAAGLIYRNNRATWAAAPRIVPKKNPGE-YRMTIDSRPINAWTEAMPWPMPNLEAAMATLVGMEVFFTLDWLKGYWQLPLHPECQMWYSFMTPFGVYTPTRILMGQTDAVAFCQSVVNELFGDLMYQGVLGWLDDLLGYARSAEQLLVLLEKVLHICQEYRLKLHPKKCDFYLKEAKWCGKVISSEGISHDPSRVQGLCEMKAPTTAAELQQFLCATNWMRASIPLYAQRVDPLRRLLDVATKIAGSAKKTALAKVDLAVAGWTAEHDECFEEVKATLARMVPLA-HPSEDKAICLFTDASADHWGAACTQVPKVDLE--LTVDKQRHESLAFLSGSFTGASSRWPVIEKEAYAVVESCKRLEYLLLRQQGFRLFTDHRNLLYIFNPRGYDSGMARYQAHKLQRWAMVMATFPYTLEHVAGEANVWGDLLSRW 552
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Match: H3H4S7_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4S7_PHYRM) HSP 1 Score: 311 bits (798), Expect = 6.560e-90 Identity = 189/492 (38.41%), Postives = 270/492 (54.88%), Query Frame = 1
Query: 145 DAFRRALTGEPPARVAPMRVTLKQGADLTQVKAKPRVYPPEKSTWLTEHFELLCETGMVYPNPQAVCASVAMAFTK-----GPGKGYRLVADFSPINVQCELVPGPMLNPEIEGEKCAGAVAFCTMDCLQGYCQCPLAKEAREYFTLVTRDGLFTPTRVPQEVMNATSYFQGMMMEVLGDLVGRACLIYVDDVKVIGRSVEDLIVYLRSVLLRLMKRGLFLAAHTLVRFATEVTWCGKLDSGTAVRHDPERVRGLEEMRRPETVGELMQILQATNWMRLSLPHMAEIVAPLRALMELRLK-GTSRTKRVASRRALTDGDWTLERVEAWDNSRGMLMNAVELSFRR--ADDCRALMFPDASDLFWGCCLTQVPKEDLVAGLSFMDMSHEPLAFLSG---------PTVDKESFAILSAFQRVPYLLWD--GSNIFCDHRNLAYIFSPQSCGVTLSKAASQRLAGWRACMRQFNYVIQHIPGEENHWGDLLSRW 1563
D+FR +PP RVAPM+V LK GA T ++A+PR Y P +L H L + G+++ N ++ AS K P R+ D +N + E +P PM E+ + GA F +D +GY Q PL +++E ++ VT G++TPTRVP +A +Y QG++ E+ GDL+G L ++DD+ L+ L VL R K GL L A FATEV WCG++ S VRH PER++GL EM+ P+T G+L Q L A NWMR S+P I A L ++ + SR K +R L D W + + + R L+N V L+ AD C ++ DAS+ +WG +T + E+L L + H PLAFLSG PT++KE+FAI+ A +R+ YLL G ++F DHRNL YIF+P + +++ + +L W + F YVI+H+PGEEN WGDLLSRW
Sbjct: 643 DSFRLEFGHDPPVRVAPMQVRLKPGA--TPIRAQPRRYSPNDRAFLDRHTTTLMKHGLIFKNHRSRWASAPRIVKKKEQADDPLADPRMTIDTRSVNERTEPMPWPMPVLEVVIGELEGAKVFFVLDWFRGYWQLPLHPDSQEIYSFVTHRGIYTPTRVPMGATDAVAYCQGVVEEIFGDLLGTCILAWLDDILGYAEDEASLLEVLDKVLERCEKFGLKLHAKKCQFFATEVKWCGRMISAQGVRHCPERIQGLVEMQAPQTAGDLQQFLCAVNWMRQSIPEFTRITAVLYDALDRAAQIAGSRKKVKLARVRLEDVSWGADEMAGVEAVRDALLNMVPLAHPSPTADLC---LYSDASNDYWGAVVTMLDPEELK--LPRAEQHHRPLAFLSGRFVGAAQRWPTIEKEAFAIVEAVRRLEYLLLRPRGFHLFTDHRNLVYIFNPYATDGMMARYQADKLQRWALALMSFRYVIEHVPGEENAWGDLLSRW 1127
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Match: A0A6A3DJI3_9STRA (Reverse transcriptase domain-containing protein n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3DJI3_9STRA) HSP 1 Score: 299 bits (766), Expect = 2.560e-89 Identity = 187/516 (36.24%), Postives = 272/516 (52.71%), Query Frame = 1
Query: 70 RAAVETGFPEGHVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLTQVKAKPRVYPPEKSTWLTEHFELLCETGMVYPNPQAVCASVAMAFTK-----GPGKGYRLVADFSPINVQCELVPGPMLNPEIEGEKCAGAVAFCTMDCLQGYCQCPLAKEAREYFTLVTRDGLFTPTRVPQEVMNATSYFQGMMMEVLGDLVGRACLIYVDDVKVIGRSVEDLIVYLRSVLLRLMKRGLFLAAHTLVRFATEVTWCGKLDSGTAVRHDPERVRGLEEMRRPETVGELMQILQATNWMRLSLPHMAEIVAPLRALME--LRLKGTSRTKRVASRRALTDGDWTLERVEAWDNSRGMLMNAVELSFRRADDCRALMFPDASDLFWGCCLTQVPKEDLVAGLSFMDMSHEPLAFLSG---------PTVDKESFAILSAFQRVPYLLW--DGSNIFCDHRNLAYIFSPQSCGVTLSKAASQRLAGWRACMRQFNYVIQHIPGEENHWGDLLSRW 1563
R A G E L EI+ D+FR +PP +VAP++V +K GA T KA R PP +L H L +G+VY NP++ AS K P R+ D +N + + +P PM EI + GA F ++D +GY Q PL +++E+F +T G++TPTRVP ++ +Y Q ++ E+ GDL+G ++DD+ + E L+V L VL R K GL L A +ATE+ WCGK+ S VRH P+R++GL +M P T +L Q L A NWMR +P + L A +E ++L GT R K S+ L D W +E A + R L+ V L+ + ++ DAS WG LTQ+ E+L L + H PLAF+SG T++KE+FAI+ + +R+ YLL G ++ DHRNL YIF+P T+++ + +L W + F YVI+H+PG++N WGDLLSRW
Sbjct: 130 RDAASAGLGEALQPRLREILYVR-LDSFRLEFGNDPPVKVAPLQVRIKPGAVPT--KAYARRAPPLDREFLERHVGKLLASGLVYRNPRSRWASAPRIVRKKEQDTDPTADPRMTIDTRSVNDKTDAMPWPMPILEIIIGELEGATVFFSLDWFRGYWQLPLHPDSQEFFIFITHRGMYTPTRVPMGAKDSVAYCQAVVEEIFGDLIGNGIYCWLDDILGDAKDAECLMVLLDQVLERCEKYGLKLHAKKCRFYATEIQWCGKMISANGVRHCPDRIQGLVDMPMPRTAADLQQFLCAVNWMRQCIPTYNLLTQRLYATLENAMQLAGT-RKKTKLSKCLLADAGWGVEDEGALEAVRAALLKMVPLAHPNQQE-EVCLYTDASQDSWGAVLTQLRPEELQLPLE--EQQHRPLAFVSGRFVGASSRWATIEKEAFAIVESTRRLEYLLLRPKGFRLYTDHRNLVYIFNPYGVDSTMARYQADKLQRWSISLTAFRYVIEHVPGDQNEWGDLLSRW 638
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Match: A0A6A4C9T3_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4C9T3_9STRA) HSP 1 Score: 300 bits (769), Expect = 2.200e-87 Identity = 188/516 (36.43%), Postives = 272/516 (52.71%), Query Frame = 1
Query: 70 RAAVETGFPEGHVAELEEIILGECFDAFRRALTGEPPARVAPMRVTLKQGADLTQVKAKPRVYPPEKSTWLTEHFELLCETGMVYPNPQAVCASVAMAFTKGPGK-----GYRLVADFSPINVQCELVPGPMLNPEIEGEKCAGAVAFCTMDCLQGYCQCPLAKEAREYFTLVTRDGLFTPTRVPQEVMNATSYFQGMMMEVLGDLVGRACLIYVDDVKVIGRSVEDLIVYLRSVLLRLMKRGLFLAAHTLVRFATEVTWCGKLDSGTAVRHDPERVRGLEEMRRPETVGELMQILQATNWMRLSLPHMAEIVAPLRALME--LRLKGTSRTKRVASRRALTDGDWTLERVEAWDNSRGMLMNAVELSFRRADDCRALMFPDASDLFWGCCLTQVPKEDLVAGLSFMDMSHEPLAFLSG---------PTVDKESFAILSAFQRVPYLLW--DGSNIFCDHRNLAYIFSPQSCGVTLSKAASQRLAGWRACMRQFNYVIQHIPGEENHWGDLLSRW 1563
R A G E + L EI+ D+FR +PP +VAP++V +K GA T KA R PP +L H L +G+VY NP++ AS K R+ D +N + + +P PM EI + GA F ++D +GY Q PL +++E+FT +T G++TPTRVP ++ +Y Q ++ E+ GDL+G ++DD+ + E L+V L VL R K GL L A +ATE WCGK+ S VRH P+R++GL +M P T +L Q L A NWMR +P + L A +E ++L GT R K S+ L D W +E A + R L+ V L+ D ++ DAS WG LTQ+ E+L L + H PLAF+SG T++KE+FAI+ + +R+ YLL G ++ DHRNL YIF+P T+++ + +L W + F YVI+H+PG++N WGDLLSRW
Sbjct: 315 RDAASAGLGEALQSRLREILYVR-LDSFRLEFGNDPPVKVAPLQVRIKPGAVPT--KAYARRAPPLDREFLERHVGKLLASGLVYRNPRSRWASAPRIVRKKEQDTDLTADPRMTIDTRSVNDKTDAMPWPMPILEIIIGELEGATVFFSLDWFRGYWQLPLHPDSQEFFTFITHRGMYTPTRVPMGAKDSVAYCQAVVEEIFGDLIGNGIYCWLDDILGYAKDAESLMVLLDQVLERCEKYGLKLHAKKCRFYATETQWCGKMISANGVRHCPDRIQGLVDMPMPRTAADLQQFLCAVNWMRQCIPTYNLLTQRLYATLENAMQLAGT-RKKTKLSKCLLADAGWGVEDEAALEAVRAALLKMVPLAHPNQQD-EVCLYTDASQDSWGAVLTQLRPEELQLPLE--EQQHRPLAFVSGRFVGASSRWATIEKEAFAIVESTRRLEYLLLRPKGFRLYTDHRNLVYIFNPYGVDSTMARYQADKLQRWSISLTAFRYVIEHVPGDQNVWGDLLSRW 823
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Match: A0A6A3ME06_9STRA (Uncharacterized protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3ME06_9STRA) HSP 1 Score: 302 bits (774), Expect = 3.800e-87 Identity = 182/493 (36.92%), Postives = 272/493 (55.17%), Query Frame = 1
Query: 145 DAFRRALTGEPPARVAPMRVTLKQGADLTQVKAKPRVYPPEKSTWLTEHFELLCETGMVYPNPQAVCASVAMAFTK-----GPGKGYRLVADFSPINVQCELVPGPMLNPEIEGEKCAGAVAFCTMDCLQGYCQCPLAKEAREYFTLVTRDGLFTPTRVPQEVMNATSYFQGMMMEVLGDLVGRACLIYVDDVKVIGRSVEDLIVYLRSVLLRLMKRGLFLAAHTLVRFATEVTWCGKLDSGTAVRHDPERVRGLEEMRRPETVGELMQILQATNWMRLSLPHMAEIVAPLRALME--LRLKGTSRTKRVASRRALTDGDWTLERVEAWDNSRGMLMNAVELSFRR--ADDCRALMFPDASDLFWGCCLTQVPKEDLVAGLSFMDMSHEPLAFLSG---------PTVDKESFAILSAFQRVPYLLWD--GSNIFCDHRNLAYIFSPQSCGVTLSKAASQRLAGWRACMRQFNYVIQHIPGEENHWGDLLSRW 1563
D FR +PP RV P++V LK G + VK + R Y P +L H L + G+VY N ++ AS K P R+ D +N + E +P PM E+ + GA F +D +GY Q PL +++E F+ VT G++TPTRVP +A ++ QG++ E+ GDL+G+ L ++DD+ + E+L+ L VL R K GL L A + FATEV WCG++ S V+H PER++GL +M+ P T GEL Q + A NWMR S+P + + A L +E ++ G+ + K++A R L + W +++ R L+ V L+ R A+ C ++ DAS FWG +TQ+ + A L ++ H+PLAFLSG T++KE+FAI+ A +R+ YLL G ++ DHRNL YIF+P + +++ + +L W + F YVI+H+PGEEN WGDLLS W
Sbjct: 308 DCFRVEFGNDPPVRVVPLKVRLKDG--VRPVKTQTRRYSPTDREFLDRHTRALLDNGLVYLNHRSCWASAPNIVRKKEQDVDPSADPRMTIDSRGVNERTEAMPWPMPVLEVVIGELEGAKYFFVLDWFRGYWQLPLHPDSQELFSFVTHRGIYTPTRVPMGATDAVAFCQGVVEEIFGDLLGQGLLCWLDDIIGYAETEEELLALLEKVLERREKFGLKLHAKKYLFFATEVKWCGRIISAEGVKHCPERIQGLVDMQPPRTAGELQQFVCAANWMRQSIPEYSRLSAALYEALERAAQVAGSRKQKKMAKVR-LDEVGWHDTEASSFEAVRAALLRMVPLAHPRPTAEVC---LYTDASQDFWGAVVTQLKPGE--AELPLIEQQHQPLAFLSGRFVGASSCWSTIEKEAFAIVEATRRLEYLLLRPAGFRLYTDHRNLVYIFNPYATDGAMARYRADKLQRWALLLMSFKYVIEHVPGEENVWGDLLSCW 792
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE) HSP 1 Score: 300 bits (769), Expect = 2.810e-86 Identity = 178/383 (46.48%), Postives = 234/383 (61.10%), Query Frame = 1
Query: 172 EPPARVAPMRVTLKQGADLTQVKAKPRVYPPEKSTWLTEHFELLCETGMVYPNPQAVCASVAMAFTKGPGK-----GYRLVADFSPINVQCELVPGPMLNPEIEGEKCAGAVAFCTMDCLQGYCQCPLAKEAREYFTLVTRDGLFTPTRVPQEVMNATSYFQGMMMEVLGDLVGRACLIYVDDVKVIGRSVEDLIVYLRSVLLRLMKRGLFLAAHTLVRFATEVTWCGKLDSGTAVRHDPERVRGLEEMRRPETVGELMQILQATNWMRLSLPHMAEIVAPLRALMELRLKGTSR-TKRVASRRALTDGDWTLERVEAWDNSRGMLMNAVELSFRRADDCRALMFPDASDLFWGCCLTQVPKEDLVAGLSFMDMSHEPLAFLS 1302
E +V P+++TLK G Q KA RVY P K+TWL+ L GMV QAV AS AM K PG+ YRL D+ N+QCE VP + + E++ GA F +D LQGY Q PLA+ ARE F++ T +GLF PTRVPQ+V+NAT YFQ +M E+L G C ++VDD G DL+ L +L RL G+F AAH F T++ WCGK+ SG V DPER++GL +MRRPET G+LMQ LQA W+R SL +AE++ P+R L+E+ + R TK +A RA+ WT VEAW +++ ++ +AV LS + D LMFPDAS+ WG LTQVP+E+L G+S M+HEPLAFLS
Sbjct: 389 EVQRKVEPLKMTLKPGVQHVQEKA--RVYSPAKATWLSGCMAALVAMGMVVKTIQAVWASPAMTVPK-PGRVGREGEYRLGNDYLRANLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQ---GLNCAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAHKCPFFDTKIRWCGKVYSGGQVASDPERLQGLTDMRRPETAGKLMQFLQAVKWLRTSLSRLAEVMEPVRTLLEVNMASAPRQTKSIAPNRAIKCEAWTAGMVEAWISAQDLVAHAVALSHPK-DGFAVLMFPDASEEHWGSFLTQVPQEELERGVSVEHMTHEPLAFLS 764 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99831.17301.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig99831.17301.1 >prot_H-elongata_contig99831.17301.1 ID=prot_H-elongata_contig99831.17301.1|Name=mRNA_H-elongata_contig99831.17301.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=518bp MFMEVGGEVAARHEALVSALRAAVETGFPEGHVAELEEIILGECFDAFRRback to top mRNA from alignment at H-elongata_contig99831:372..1961- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig99831.17301.1 ID=mRNA_H-elongata_contig99831.17301.1|Name=mRNA_H-elongata_contig99831.17301.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1590bp|location=Sequence derived from alignment at H-elongata_contig99831:372..1961- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig99831:372..1961- >mRNA_H-elongata_contig99831.17301.1 ID=mRNA_H-elongata_contig99831.17301.1|Name=mRNA_H-elongata_contig99831.17301.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3108bp|location=Sequence derived from alignment at H-elongata_contig99831:372..1961- (Himanthalia elongata Himel1 dioecious)back to top |