mRNA_H-elongata_contig99263.17264.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Match: A0A6H5KUU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU7_9PHAE) HSP 1 Score: 280 bits (717), Expect = 4.680e-87 Identity = 139/185 (75.14%), Postives = 159/185 (85.95%), Query Frame = 1
Query: 1 TRRGYLQFLVDSKVVYEALEEACASEPRLAELRETGLERSTALAKDIAWMLETYPDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICHYYNHYFAHTAGGRMIGRKVAETCLEGRILEFYQWGGHDVKALLDVVRLKIDTMAKGWSEDEKQACVAETPRSFEYGARLVSSITS 555
+RRGYLQFLVDSKVVYEALEEAC S+PRLAE R TGLER+ AL KDIAWMLETY D+ +G G +G+AP P T+ ALEYA+FLRE +ASSLPAF+CHYYNHYFAHTAGGRMIGRKVAE+CL+GR LEFYQWG DVK LLD VR+KID MAKGWSE+EK+ACV+ET R+F+YG L+SSITS
Sbjct: 143 SRRGYLQFLVDSKVVYEALEEACGSDPRLAEFRNTGLERTEALTKDIAWMLETYSDSWAEG---GGGDGKAPSP-TENALEYASFLREKVASSLPAFMCHYYNHYFAHTAGGRMIGRKVAESCLDGRTLEFYQWGADDVKVLLDGVRVKIDAMAKGWSEEEKEACVSETARTFKYGGSLLSSITS 323
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Match: D7FK52_ECTSI (Heme oxygenase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK52_ECTSI) HSP 1 Score: 253 bits (645), Expect = 5.450e-75 Identity = 129/191 (67.54%), Postives = 148/191 (77.49%), Query Frame = 1
Query: 1 TRRGYLQFLVDSKVVYEALEEACASEPRLAELRETGLERSTALAKDIAWMLETYPDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICHYYNHYFAHTAGGRMIGRKVAET------------------CLEGRILEFYQWGGHDVKALLDVVRLKIDTMAKGWSEDEKQACVAETPRSF 519
+RRGYLQFLVDSKVVYEALEEAC S+PRLAE R TGLER+ AL KDIAWMLE YPD+ +G G +G+AP P T+ ALEYA+FLRE +AS+LP F+CHYYNHYFAHTAGGRMIGRKVAE+ CL+GR LEFYQWG DVK LLD VR+KID MAKGWSE+EK+ACV+ET R+F
Sbjct: 143 SRRGYLQFLVDSKVVYEALEEACGSDPRLAEFRNTGLERTEALTKDIAWMLEAYPDSWAEG---GGGDGKAPSP-TENALEYASFLREKVASTLPGFMCHYYNHYFAHTAGGRMIGRKVAESALGVFFKHVSAFPFRSDSCLDGRTLEFYQWGSDDVKVLLDGVRVKIDAMAKGWSEEEKEACVSETARTF 329
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Match: A0A835Z600_9STRA (Heme oxygenase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z600_9STRA) HSP 1 Score: 204 bits (518), Expect = 5.960e-59 Identity = 102/184 (55.43%), Postives = 124/184 (67.39%), Query Frame = 1
Query: 1 TRRGYLQFLVDSKVVYEALEEACASEPRLAELRETGLERSTALAKDIAWMLETYPDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICHYYNHYFAHTAGGRMIGRKVAETCLEGRILEFYQWGGHDVKALLDVVRLKIDTMAKGWSEDEKQACVAETPRSFEYGARLVSSIT 552
TR GYLQFLVDS+ VY +E + LA LR+TGLER+ AL KDIAWMLETYP+ A PP + A Y FL++ A S+P F+CH+YNHYFAHTAGG MIG+KVA+ CL G+ L FYQW DV+ALLD VR+ ID MA GWS +EK C+ ET R+F+YG L+ SIT
Sbjct: 46 TRAGYLQFLVDSRAVYSTFDEVVGANDALAALRDTGLERTAALEKDIAWMLETYPEL-------------ATPPVSDNAAAYCAFLKDIAAKSVPGFVCHFYNHYFAHTAGGIMIGKKVADLCLGGQKLAFYQWAS-DVRALLDAVRVNIDAMADGWSREEKDECLDETARTFKYGGSLLGSIT 215
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Match: A0A8J5XQF0_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XQF0_DIALT) HSP 1 Score: 178 bits (451), Expect = 3.550e-49 Identity = 95/185 (51.35%), Postives = 121/185 (65.41%), Query Frame = 1
Query: 1 TRRGYLQFLVDSKVVYEALEEACASEPRLAELRETGLERSTALAKDIAWMLETYPDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICHYYNHYFAHTAGGRMIGRKVAETCLEGRILEFYQWGGHDVKALLDVVRLKIDTMAKGWSEDEKQACVAETPRSFEYGARLVSSITS 555
TR+GYLQFLVDS+ VY A+EE LA L+ TGLER+ AL KDIAW L G P PT+AA YA L+ S PAFICH+YN+YFAHTAGGRMIG+++++ L+GR+LEFY+W G DVK LLD R ID MA W++DE+ AC+A+T SF+ G L++S+ S
Sbjct: 46 TRKGYLQFLVDSRHVYGAVEEIVGERAELATLKNTGLERTVALDKDIAWFLSD-------------EGGCQPTTPTEAATGYAAELKRL---STPAFICHFYNYYFAHTAGGRMIGKQMSDMLLDGRVLEFYKWDG-DVKELLDAARQHIDAMAASWTQDERDACLAQTAASFKGGGGLMASLRS 213
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Match: A0A6V1QVP2_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QVP2_HETAK) HSP 1 Score: 169 bits (428), Expect = 2.790e-45 Identity = 87/181 (48.07%), Postives = 113/181 (62.43%), Query Frame = 1
Query: 10 GYLQFLVDSKVVYEALEEACASEPRLAELRETGLERSTALAKDIAWMLETYPDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICHYYNHYFAHTAGGRMIGRKVAETCLEGRILEFYQWGGHDVKALLDVVRLKIDTMAKGWSEDEKQACVAETPRSFEYGARLVSSIT 552
YLQFLVDS++VY+ +E+ C S P L + + TGLER+ AL +DIAWM E + +P G+ YA LRE + SLP F+CHYYNHYFAHTAGG MIGRK++E LEG LEFY+W G DVK + V ID +A WS+ +KQ C+ ET +F YG L+S ++
Sbjct: 86 NYLQFLVDSRLVYQTMEDICNSTPGLEKFQNTGLERTAALDQDIAWMSEKFSVDVPAASPLGQG--------------YADVLREVVGRSLPGFVCHYYNHYFAHTAGGLMIGRKISEALLEGATLEFYKWAG-DVKEMGMAVIRDIDALADTWSDAQKQECLEETGNTFRYGGALLSHLS 251
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Match: Q94FW5_PINTA (Heme oxygenase 1 n=2 Tax=Pinaceae TaxID=3318 RepID=Q94FW5_PINTA) HSP 1 Score: 170 bits (431), Expect = 5.310e-45 Identity = 93/187 (49.73%), Postives = 118/187 (63.10%), Query Frame = 1
Query: 1 TRRGYLQFLVDSKVVYEALEEAC--ASEPRLAELRETGLERSTALAKDIAWMLETYPDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICHYYNHYFAHTAGGRMIGRKVAETCLEGRILEFYQWGGHDVKALLDVVRLKIDTMAKGWSEDEKQACVAETPRSFEYGARLVSSITS 555
T GYL+FLVDSKVVY+ LE+ A+ P AE R TGLERS LAKD+ W R++G P P+ L Y+ L+E PAF+CH+YN YFAHTAGGRMIGRKVAE L+GR LEFY+W D+ LL+ VR KI+ +A+GWS +EK C+ ET +SF+Y +L+ I S
Sbjct: 146 TIEGYLKFLVDSKVVYDTLEDVVQKATYPAYAEFRNTGLERSEKLAKDLEWF---------------RQQGHIIPEPSSPGLSYSKHLQELSEKDPPAFLCHFYNVYFAHTAGGRMIGRKVAEKILDGRELEFYKWE-EDLTTLLNRVREKINLVAEGWSREEKNHCLEETEKSFDYSGKLLRLIIS 316
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Match: E1ZKC3_CHLVA (Uncharacterized protein (Fragment) n=2 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZKC3_CHLVA) HSP 1 Score: 165 bits (418), Expect = 2.660e-44 Identity = 97/190 (51.05%), Postives = 117/190 (61.58%), Query Frame = 1
Query: 1 TRRGYLQFLVDSKVVYEALEEAC--ASEPRLAELRETGLERSTALAKDIAWMLETY----PDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICHYYNHYFAHTAGGRMIGRKVAETCLEGRILEFYQWGGHDVKALLDVVRLKIDTMAKGWSEDEKQACVAETPRSFEYGARLVSSIT 552
TR G+L F+ +SKVVYEA EE A+ P +L TGLERS LAKDIA+M + + P A DG PG YA LRE SS PAF+CHYYNHYFAHTAGGRMIG+ V+ L+G FYQW G DVK LD VR I+ +A WS++EK AC+ ETP++F +G RLV IT
Sbjct: 40 TRPGFLHFMGESKVVYEAFEEILDQAAVPYYKQLTNTGLERSEPLAKDIAYMQQQWGMEAPVAAEDG--PGHT--------------YAKLLRELAVSSPPAFLCHYYNHYFAHTAGGRMIGKSVSNAVLDGWTGAFYQWEG-DVKERLDAVRATINGIAAEWSQEEKDACMQETPKTFGWGGRLVQLIT 212
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Match: A0A7R9TEH2_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TEH2_9VIRI) HSP 1 Score: 164 bits (415), Expect = 1.000e-43 Identity = 92/183 (50.27%), Postives = 115/183 (62.84%), Query Frame = 1
Query: 1 TRRGYLQFLVDSKVVYEALEEACASEPR---LAELRETGLERSTALAKDIAWMLETYPDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICHYYNHYFAHTAGGRMIGRKVAETCLEGRILEFYQWGGHDVKALLDVVRLKIDTMAKGWSEDEKQACVAETPRSFEYGARLV 540
TR Y Q+LVDSKVVY+ALEE AS P LA + TGLER ALAKD+ + Y G P PT+A YA FLRE AS +P F+CHYYN YFAHTAGGR IG+ +++ L+G+ LEFY W G +K +D VR I++MA+GWSE+EK AC+ ET SF+Y L+
Sbjct: 59 TRELYAQYLVDSKVVYDALEEVVASAPADSPLAVFQSTGLERGPALAKDLEFFESEY--------------GIKAPEPTEAGSGYAAFLREKAASDVPGFMCHYYNVYFAHTAGGRQIGKMLSDMVLDGKKLEFYSWEGV-LKDHMDGVRGSINSMAEGWSEEEKTACLEETAPSFKYAGTLL 226
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Match: A0A7S1SR94_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SR94_9CHLO) HSP 1 Score: 164 bits (416), Expect = 2.860e-43 Identity = 88/187 (47.06%), Postives = 120/187 (64.17%), Query Frame = 1
Query: 1 TRRGYLQFLVDSKVVYEALEE--ACASEPRLAELRETGLERSTALAKDIAWMLETYPDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICHYYNHYFAHTAGGRMIGRKVAETCLEGRILEFYQWGGHDVKALLDVVRLKIDTMAKGWSEDEKQACVAETPRSFEYGARLVSSITS 555
TR GYLQFLV+SKVVY+ LE A A+ P+ + +GLERS ALAKDIAWM +TY +P+ + G +EY+ LRE + PAFICHYYN YFAHTAGGRMIG KVA CL+ LEFY++ G D+ L+ VR +I+++A+ W+ +++Q C+ T SF+Y ++ +I S
Sbjct: 106 TREGYLQFLVESKVVYDTLETTIAEAASPQFTGFQNSGLERSEALAKDIAWMRDTYDLEVPEPKEDG------------PGMEYSRLLREFATNDPPAFICHYYNTYFAHTAGGRMIGNKVASMCLDSAELEFYKYEG-DLTQKLEAVRGEINSLAESWTAEQRQRCLDSTMDSFKYSGSIMQAIMS 279
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Match: A0A2K3D9D4_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3D9D4_CHLRE) HSP 1 Score: 164 bits (414), Expect = 3.570e-43 Identity = 88/184 (47.83%), Postives = 113/184 (61.41%), Query Frame = 1
Query: 1 TRRGYLQFLVDSKVVYEALEEACASEPRLAELRETGLERSTALAKDIAWMLETYPDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICHYYNHYFAHTAGGRMIGRKVAETCLEGRILEFYQWGGHDVKALLDVVRLKIDTMAKGWSEDEKQACVAETPRSFEYGARLVSSIT 552
TR GYL+FLV+SK V++ E S LR TGLER LA DIAWM +++ A PD + G AA Y FL + + PAFICHYYN YFAHTAGGRMIG KV+ L+G+ LEFY+W G DV L+ VR I+ MA+GW+ EK+ C+AET SF+Y +++ +IT
Sbjct: 91 TRPGYLRFLVESKEVFDTFERLVNSSDAYKALRNTGLERGPGLAADIAWMEQSFQLAPPDMKPDG------------AAATYVAFLEKLAKTDPPAFICHYYNFYFAHTAGGRMIGNKVSSMLLDGQTLEFYKWQG-DVNEHLEGVRKSINVMAEGWTPAEKEHCLAETESSFKYSGQILRAIT 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig99263.17264.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig99263.17264.1 >prot_H-elongata_contig99263.17264.1 ID=prot_H-elongata_contig99263.17264.1|Name=mRNA_H-elongata_contig99263.17264.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp MLETYPDALPDGEAPGRREGRAPPPPTKAALEYATFLRETLASSLPAFICback to top mRNA from alignment at H-elongata_contig99263:267..2248- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig99263.17264.1 ID=mRNA_H-elongata_contig99263.17264.1|Name=mRNA_H-elongata_contig99263.17264.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1982bp|location=Sequence derived from alignment at H-elongata_contig99263:267..2248- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig99263:267..2248- >mRNA_H-elongata_contig99263.17264.1 ID=mRNA_H-elongata_contig99263.17264.1|Name=mRNA_H-elongata_contig99263.17264.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=822bp|location=Sequence derived from alignment at H-elongata_contig99263:267..2248- (Himanthalia elongata Himel1 dioecious)back to top |