mRNA_H-elongata_contig95946.16991.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Match: A0A836CH29_9STRA (Ubiquitin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH29_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 9.280e-20 Identity = 48/87 (55.17%), Postives = 67/87 (77.01%), Query Frame = 1
Query: 1 EMMNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFIDMVESPEKWRENMEMALEMFKAQKAMMKQQEQVDDAVGDVDDLDD 261
E++NS MM+E G+PEK+E++R+AIL+NP LKQAM+QLPGF +M+E P+KW E+M A EM + Q++M++ Q GDVDDLDD
Sbjct: 154 EVLNSPMMDEFFGSPEKIEESRKAILENPMLKQAMAQLPGFSEMLEDPDKWMESMLQAKEMLEQQRSMLQDQGGAP-LGGDVDDLDD 239
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Match: D8LE10_ECTSI (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE10_ECTSI) HSP 1 Score: 79.0 bits (193), Expect = 7.230e-16 Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 1
Query: 13 SDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFIDMVES 141
SDMMEEVLGNPEKMEQARQAILDNPTLKQAM+QLPGF DM++S
Sbjct: 164 SDMMEEVLGNPEKMEQARQAILDNPTLKQAMTQLPGFADMIDS 206
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Match: A0A7S1ZLX3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZLX3_TRICV) HSP 1 Score: 66.6 bits (161), Expect = 3.010e-11 Identity = 30/63 (47.62%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 1 EMMNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFIDMVESPEKWRENMEMALEMFK 189
EM+NS M ++ + +PE++E++RQ IL+NP +K M +PG D++ PEKWRE M+ A EM+K
Sbjct: 168 EMVNSPMFQQYMNDPEQLEKSRQMILENPMMKSMMGSMPGMEDILNDPEKWRETMQAAGEMYK 230
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Match: A0A7S1UXN8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UXN8_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 3.030e-10 Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 1
Query: 1 EMMNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFIDMVESPEKWRENMEMALEMFK------AQKAMMKQ 213
+MM++ M +E + +PEK+EQARQ +L NP LK + Q+PG D+V P+ WRE M+ A+ M++ +KAMM Q
Sbjct: 140 QMMSNPMFKEFMTDPEKLEQARQMMLQNPMLKGMLGQVPGMEDVVNDPDAWRETMQAAMTMYQNMDPEDVKKAMMGQ 216
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Match: A0A7S4D8F3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D8F3_HETAK) HSP 1 Score: 58.5 bits (140), Expect = 4.280e-9 Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 1 EMMNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFIDMVESPEKWRENMEMALEMFKAQ 195
+M +SDM ++ G+PEK+E+ RQA++ NP +KQ +PGF +++ P+ +RE M A + KAQ
Sbjct: 26 QMYDSDMFSQLFGDPEKLEETRQALISNPMMKQMFGSMPGFEEILNDPDAFREAMTTAQQEMKAQ 90
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Match: A0A7S2N0G5_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N0G5_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 3.030e-8 Identity = 28/62 (45.16%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 1 EMMNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFIDMVESPEKWRENMEMALEMF 186
EMM+S + +E + +PEK+EQ+RQ IL NP +K M+ +PGF +++ KWRE M A +M+
Sbjct: 196 EMMSSPLFQEYMKDPEKLEQSRQMILQNPLMKSMMAGMPGFDEILNDEVKWRETMIAAADMY 257
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Match: A0A2V3IQY5_9FLOR (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQY5_9FLOR) HSP 1 Score: 57.4 bits (137), Expect = 1.290e-7 Identity = 31/78 (39.74%), Postives = 51/78 (65.38%), Query Frame = 1
Query: 10 NSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFIDMVESPEKWRENMEMALEMFKAQKAMMKQQEQVDDAVGD 243
N+ M+++ L +PEK EQ+R AIL+NP +K+ + P F +V P KWR++M+ A ++FK + +++ DDA GD
Sbjct: 192 NTPMLQDYLNDPEKQEQSRDAILNNPYMKKLLESDPEFKKVVSDPSKWRDSMDAAKKLFK-----VSEKQADDDADGD 264
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Match: M1VHM4_CYAM1 (Peptidylprolyl isomerase n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VHM4_CYAM1) HSP 1 Score: 55.5 bits (132), Expect = 6.170e-7 Identity = 29/64 (45.31%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 4 MMNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFIDMVESPEKWRENMEMALEMFKAQ 195
+ S M+E L + EK E++RQA+L+NP L+Q M P F ++VE P+KW E+M A E+F Q
Sbjct: 213 LWESPAMQEYLSSAEKQEESRQALLNNPFLRQWMDADPQFREVVEDPQKWAESMRAARELFAQQ 276
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Match: A0A7J7IJI0_9RHOD (Peptidylprolyl isomerase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJI0_9RHOD) HSP 1 Score: 53.9 bits (128), Expect = 2.150e-6 Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 4 MMNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFIDMVESPEKWRENMEMALEMFKAQ 195
+ +S M++ L + EK E++RQA+L+NP L+Q M P F ++VE P KW E+M A E+F Q
Sbjct: 202 LWDSPAMQDYLSSEEKQEESRQALLNNPFLRQWMDADPQFREVVEDPRKWAESMRAAKELFAQQ 265
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Match: A0A7S0C3I0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3I0_9STRA) HSP 1 Score: 50.8 bits (120), Expect = 8.530e-6 Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 1
Query: 1 EMMNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQ----------LPGFIDMVESPEKWRENMEMALEMFKA 192
+++NS + +E + +PEK+E++RQ IL NP +K MS +PGF D++ S EK+R+ M+ EM+K+
Sbjct: 35 DIVNSAIFQEYVSSPEKIEESRQMILGNPMMKTMMSGAGNAGGGMGGVPGFDDILNSEEKFRDTMQQMAEMYKS 108 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig95946.16991.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig95946.16991.1 >prot_H-elongata_contig95946.16991.1 ID=prot_H-elongata_contig95946.16991.1|Name=mRNA_H-elongata_contig95946.16991.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=88bp MMNSDMMEEVLGNPEKMEQARQAILDNPTLKQAMSQLPGFIDMVESPEKWback to top mRNA from alignment at H-elongata_contig95946:1761..2369- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig95946.16991.1 ID=mRNA_H-elongata_contig95946.16991.1|Name=mRNA_H-elongata_contig95946.16991.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=609bp|location=Sequence derived from alignment at H-elongata_contig95946:1761..2369- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig95946:1761..2369- >mRNA_H-elongata_contig95946.16991.1 ID=mRNA_H-elongata_contig95946.16991.1|Name=mRNA_H-elongata_contig95946.16991.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=528bp|location=Sequence derived from alignment at H-elongata_contig95946:1761..2369- (Himanthalia elongata Himel1 dioecious)back to top |