mRNA_H-elongata_contig9590.16988.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig9590.16988.1
Unique Name	mRNA_H-elongata_contig9590.16988.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: D7G1I1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D7G1I1_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 3.240e-60
Identity = 119/220 (54.09%), Postives = 141/220 (64.09%), Query Frame = 2

Query:  602 MMSVLTPDLSYLLTFNDVGGRSSERRGTRGTFTHGVRTMSGGDRRDVSLEKKIDHGQVLFTSDSLKPDLSGEAHTNAMRSTERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSGEAHTNTVRSTERSGSHGTFAPGVKIFFGGMPRGVPLETKYDHGEVLY--VSDKLEPDLS--GEAHTNAARSTERLGSHGTFAPGVKTFFGG 1249
            M SV   DLS L TFN  GGR  ER GTRG+FT GVR MSGG  RDV  E ++DHG+VLF S   KPDLS EA TNA+R TERLG+ G F PG + ++GG PRDVPLE + DHGKVL+VS   +PDLS EA TN +R  ER GS G F  GV+ + GG PR VPL    D G VL+   S++  P +S  GE + +  R  ER G  G+F  GV    GG
Sbjct:    1 MTSVCKSDLSGLPTFNVAGGRPDERFGTRGSFTRGVRIMSGGHTRDVPREAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGTRGRFTPGGRRWVGGKPRDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAIRPKERLGSRGRFTAGVRGWVGGKPRDVPLPRLRDPGTVLFESASERSRPSMSFSGETNVSGGREDERHGRLGSFEHGVVEARGG 220

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BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: D7FZE3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE3_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 4.350e-57
Identity = 136/281 (48.40%), Postives = 161/281 (57.30%), Query Frame = 2

Query:  599 SMMSVLTPDLSYLLTFNDVGGRSSERRGTRGTFTHGVRTMSGGDRRDVSLEKKIDHGQVLFTSDSLKPDLSGEAHTNAMRSTERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSGEAHTNTVRSTERSGSHGTFAPGVKIFFGGMPRGVPLETKYDHGEVLY--VSDKLEPDLS--GEAHTNAARSTERLGSHGTFAPGVKTFFGGVPRDIPLETKYDHGEVLYVSDKLEPDLSGEARTNTMRPSERFGPRGGFTRGVRHWLGGFP 1429
            +M SV  PDLS L TFN  GGR  ER GTRG+FT GVR MSGG  RDV LE ++DHG+VLF S   KPDLS EA TNA+R  ERLG+ G F PG + + GG PRDVPLE + DHGKVL VS   +PDLS EA  N  R TER GS G F  GV+ + GG PR VPL    D G VL+   S++  P LS  GE + +  R  ER G  G+F  GV    GG     PL+      +  + S+  +    G  + N  R   R GP   F  GV    GG P
Sbjct:  289 AMTSVHKPDLSGLPTFNVAGGRPDERFGTRGSFTRGVRIMSGGHARDVPLEAEVDHGKVLFVSAIHKPDLSTEARTNAVRPMERLGARGRFTPGGRRWAGGKPRDVPLEAEVDHGKVLLVSAVHKPDLSAEARINATRPTERLGSRGRFTAGVRRWGGGEPRDVPLPRVRDPGTVLFESASERSRPSLSFSGETNVSGGREDERHGRLGSFEHGVVEARGG-----PLQV-----QAAFASEVEQLWHEGGQKENKYR---RCGPSH-FVAGVSILSGGMP 555

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BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A6H5KAW1_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAW1_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 3.000e-49
Identity = 100/196 (51.02%), Postives = 122/196 (62.24%), Query Frame = 2

Query:  758 IDHGQVLFTSDSLKPDLSGEAHTNAM--RSTERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSGEAHTNTVRSTERSGSHGTFAPGVKIFFGGMPRGVPLETKYDHGEVLYVSDKLEPDLSGEAHTNAARSTERLGSHGTFAPGVKTFFGGVPRDIPLETKYDHGEVLY--VSDKLEPDLS 1333
            I++  +   +   KPDLSG    N    R  ER G+ G+F  GV I  GG  RDVPLE + DHGKVL+VS   +PDLS EA TN VR  ER G+ G F PG + + GG PR VPLE + DHG+VL+VS   +PDLS EA TNA R TERLGS G F  GV+ + GG PRD+PL    D G VL+   S++  P LS
Sbjct:   11 INNDNIRAMTSVHKPDLSGLPAFNVAGGRPDERFGTRGSFTRGVHIMSGGHARDVPLEAEVDHGKVLFVSAIHKPDLSAEARTNAVRPMERLGARGRFTPGGRRWAGGKPRDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGSRGRFTAGVRRWAGGEPRDVPLPRVCDPGTVLFESASERSRPSLS 206

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BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A6H5KBU2_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBU2_9PHAE)

HSP 1 Score: 128 bits (322), Expect = 4.830e-30
Identity = 69/135 (51.11%), Postives = 83/135 (61.48%), Query Frame = 2

Query: 1148 PDLSGEAHTNAA--RSTERLGSHGTFAPGVKTFFGGVPRDIPLETKYDHGEVLYVSDKLEPDLSGEARTNTMRPSERFGPRGGFTRGVRHWLGGFPHDSPVKTEADNGEVHF--VPFKRKPNLS*VRMTNILGGR 1540
            PDLSG    N A  R  ER G+ G+F  GV    GG  RD+PLE + DHG+VL+VS   +PDLS EARTN +RP+ER G RG FT GVR W GG P D P+    D G V F     + +P+LS  R TN+ GGR
Sbjct:    7 PDLSGLPAFNVAGGRPDERFGTRGSFTRGVHIMSGGHARDVPLEAEVDHGKVLFVSAVHKPDLSAEARTNAVRPTERLGSRGRFTAGVRRWAGGEPRDVPLPRVCDPGTVLFESASERSRPSLSFSRETNVSGGR 141

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BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A836CPV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPV2_9STRA)

HSP 1 Score: 104 bits (260), Expect = 2.690e-21
Identity = 82/213 (38.50%), Postives = 104/213 (48.83%), Query Frame = 2

Query:  803 DLSGEAHTNAM--RSTERLGSHGTFAPGVKIFLGGVPRDV--PLETKYDHGKVLYVSDKLEPDLSGEAHTNTVRSTERSGSHGTFAPGVKIFFGGMPRGVPLETKYDHGEVLYVSDKLEPDLSGEAHTNAA--RSTERLGSHGTFAPGVKTFFGGVPRDIPLETKY-DHGEVLYVSDKLEPDLSGEARTNTMRPS---ERFGPRGGFTRGVRH 1411
            DL G  HTNA+  R  ER G  G +  GV +F GGVP DV  P ET  +HG VL+ S  L P+L  E    +    ER G  G+ A             V L+ + +HG +L     L PDLS E  TNAA  R+TERLG+ G+F PG     GG  RD+P+     + G VL+    L  D +  A    ++P    ER G  G F  G  H
Sbjct:    7 DLDG--HTNAVGGRPDERHGFQGGWTHGVTVFCGGVPHDVRPPKETT-NHGTVLFTSASLRPNLEDELRIKSCSDGEREGRSGSQAHWTHP----AHDDVQLD-ELNHGTILATFPHLRPDLSYEGRTNAAGGRATERLGARGSFTPGRAIRAGGPARDVPVPAPILNRGTVLFTLATLACDAAAAAAP-ALKPGTTDERVGRAGSFEHGDAH 210

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BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A835YLE4_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLE4_9STRA)

HSP 1 Score: 102 bits (253), Expect = 4.180e-20
Identity = 82/225 (36.44%), Postives = 102/225 (45.33%), Query Frame = 2

Query:  752 KKIDHGQVLFTSDSLKPDLSGEAHTNAMRSTERLGSHGTFAPGVKIFLGGVPRDVPLETKYD-HGKVLYVSDKLEPDLSGEAHTNTVRSTERSGSHGTFAPGVKIFFGGMPRGVPLE-TKYDHGEVLYVSDKLEPDLSGEAHTNAA--RSTERLGSHGTFAPGVKTFFGGVPRDIPLETK-YDHGEVLYVSDKLEPDLSGEARTNTMRPSERFGPRGGFTRGVRH 1411
            +++DHG  L T  +LKPDLS    T    + ERL     F   V    G     VPL    + HG VL+ S  L+PDLS    T      ER G    F    +       R VP++  + + G VL     L+P+++    TN A  RSTERLG  G F PGV T  GG   D+P+     + G VLY S  L PD S E R       ER G  G F  G  H
Sbjct:   25 EELDHGITLATCPNLKPDLSELPLTKPGTAGERLARSALFRSRV----GPPIHYVPLSRNNENHGTVLFTSSTLKPDLSEVPLTKPGTDGERLGRSALFRSRARRPL----RDVPVDLAEPNRGTVLCTCPHLQPNMAYSYRTNVAGGRSTERLGVRGGFTPGVVTRAGGPACDVPVAAAPVNRGTVLYTSAALRPDESQELRLKQGTSDERQGRVGSFEHGDAH 241

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BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A6H5KZP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP0_9PHAE)

HSP 1 Score: 95.5 bits (236), Expect = 1.990e-18
Identity = 67/162 (41.36%), Postives = 78/162 (48.15%), Query Frame = 2

Query:  602 MMSVLTPDLSYLLTFNDVGGRSSERRGTRGTFTHGVRTMSGGDRRDVSLEKKIDHGQV-------LFTSDSLK------PDLSGEAHTN-------------AMRSTERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLY--VSDKLEPDLSGEAHTN 1003
            M SV  PDLS L TFN  GGR   R GTRG+FT GVR MSGG  R V  E ++DHG V       L     L+      P   G  H               A+R TERLGS G F  G++ + GG P DV L    D G VL+   S++  P LS    TN
Sbjct:    1 MTSVYKPDLSGLPTFNVAGGRPDGRFGTRGSFTLGVRIMSGGHARGVPREAEVDHGNVRRAQAGPLRRGPHLRHPPHGAPRNPGPLHAGRTSLGRISPPWPTAIRPTERLGSRGRFTSGIRGWAGGKPPDVTLPRVRDPGTVLFESASERSRPSLSFSGETN 162

[Close]

BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Match: A0A836CJG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJG1_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 3.150e-12
Identity = 69/210 (32.86%), Postives = 92/210 (43.81%), Query Frame = 2

Query:  680 GTRGTFTHGVRTMSGGDRRDVS--LEKKIDHGQVLFTSDSLKPDLSGEAHTNAMRSTERLGSHGT--------FAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSGEAHTNTV--RSTERSGSHGTFAPGVKIFFGGMPRG-VPL------------ETKYDHGEVLYVSDKLEPDLSGEAHTN-AARSTERLGSHGTFAPGV 1231
            GTRG++ HGV   +GG   D+    +  ++ G VLFTS++L+PDLS    T      ER+G  G+         +              P     D G VL     L+P  + +A  N V  R TER G+ G+F PG +I  GG  R  +PL                D G VL   ++L PDLSG A      R  ER G  G+F  G 
Sbjct:   34 GTRGSWQHGVTVFAGGAPHDMRPPFDTVVNSGTVLFTSETLRPDLSSVPLTKPGWPGERVGRSGSQPHRHARSHSADXXXXXXXXXXXAP-----DRGTVLGEWPHLQP-AAADAGMNVVGGRPTERRGARGSFTPGSRILAGGPARASLPLLPPPEGDXXXXXXDVPDRGRVLSSCERLTPDLSGAARCKPGTRGEERWGRVGSFEGGA 237

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot

BLAST of mRNA_H-elongata_contig9590.16988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8


Match Name	E-value	Identity	Description
D7G1I1_ECTSI	3.240e-60	54.09	Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2...	[more]
D7FZE3_ECTSI	4.350e-57	48.40	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KAW1_9PHAE	3.000e-49	51.02	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KBU2_9PHAE	4.830e-30	51.11	Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA...	[more]
A0A836CPV2_9STRA	2.690e-21	38.50	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YLE4_9STRA	4.180e-20	36.44	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A6H5KZP0_9PHAE	1.990e-18	41.36	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CJG1_9STRA	3.150e-12	32.86	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig9590	contig	H-elongata_contig9590:2..3423 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Hectar predicted targeting category	other localisation
Exons	2
Model size	2744
Cds size	972
Stop	1
Start	1

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig9590.16988.1	prot_H-elongata_contig9590.16988.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig9590 540..2189 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931353.0876863-UTR-H-elongata_contig9590:1..539	1622931353.0876863-UTR-H-elongata_contig9590:1..539	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig9590 2..539 +
1691679802.0329988-UTR-H-elongata_contig9590:1..539	1691679802.0329988-UTR-H-elongata_contig9590:1..539	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig9590 2..539 +
1622931353.153505-UTR-H-elongata_contig9590:2189..3423	1622931353.153505-UTR-H-elongata_contig9590:2189..3423	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig9590 2190..3423 +
1691679802.081754-UTR-H-elongata_contig9590:2189..3423	1691679802.081754-UTR-H-elongata_contig9590:2189..3423	Himanthalia elongata Himel1 dioecious	UTR	H-elongata_contig9590 2190..3423 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622931353.1117544-CDS-H-elongata_contig9590:539..568	1622931353.1117544-CDS-H-elongata_contig9590:539..568	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig9590 540..568 +
1691679802.0441241-CDS-H-elongata_contig9590:539..568	1691679802.0441241-CDS-H-elongata_contig9590:539..568	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig9590 540..568 +
1622931353.1292787-CDS-H-elongata_contig9590:1246..2189	1622931353.1292787-CDS-H-elongata_contig9590:1246..2189	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig9590 1247..2189 +
1691679802.0625062-CDS-H-elongata_contig9590:1246..2189	1691679802.0625062-CDS-H-elongata_contig9590:1246..2189	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig9590 1247..2189 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig9590:2..3423+
coding sequence from alignment at H-elongata_contig9590:2..3423+

protein sequence of mRNA_H-elongata_contig9590.16988.1

>prot_H-elongata_contig9590.16988.1 ID=prot_H-elongata_contig9590.16988.1|Name=mRNA_H-elongata_contig9590.16988.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=324bp
MEIIPNSNNRALAGEVLPVISMMSVLTPDLSYLLTFNDVGGRSSERRGTR
GTFTHGVRTMSGGDRRDVSLEKKIDHGQVLFTSDSLKPDLSGEAHTNAMR
STERLGSHGTFAPGVKIFLGGVPRDVPLETKYDHGKVLYVSDKLEPDLSG
EAHTNTVRSTERSGSHGTFAPGVKIFFGGMPRGVPLETKYDHGEVLYVSD
KLEPDLSGEAHTNAARSTERLGSHGTFAPGVKTFFGGVPRDIPLETKYDH
GEVLYVSDKLEPDLSGEARTNTMRPSERFGPRGGFTRGVRHWLGGFPHDS
PVKTEADNGEVHFVPFKRKPNLS*

mRNA from alignment at H-elongata_contig9590:2..3423+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig9590.16988.1 ID=mRNA_H-elongata_contig9590.16988.1|Name=mRNA_H-elongata_contig9590.16988.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3422bp|location=Sequence derived from alignment at H-elongata_contig9590:2..3423+ (Himanthalia elongata Himel1 dioecious)
TCCACTAGAAAGACCCTCCCCACTCGCTATGGGTCATGGCAGAGCAGACT
TTGCCGAGGCAGCAAGAGGAACGGAAAAGGGTTGTAATACGCAGGTAAAT
GAGATATATTGGTAAGGCTAGGTATATGTATATTATATTCGTATATAATG
AGAAGATGGTGCGAGGGAGAGAAGGGGAGTAAGTTTCTTGACTTTGCTTA
AGTCATTTTTTTAAAAGTTTACTTTTTCGTTTATTTTTTCGTAGAGAAAG
GAGGGGGTGCGGAAAAGAGAAGGAAATAAGTTTGTTGGCTAAACCGAAGT
CGATTTTAAGGAAGTGTGCTTTTTCGGAGGATTTGTGTTAAAAATATATC
ACCAAGGCTCGAACTCCACTCTCGCTCGTGTAACTATTCCATACTAGAGC
GCGCAGAAAGTATTATTTTCGTCCAAGGCGCCACTCCTCTGCGATCCCAT
TGCATCGGCTTGTTTGAACAGGCTTGAACGAAGTGCGACCGACCGTCGAC
ACCTACAACTTCCGTGTTCTTTACAGGAACTAATCACAATGGAAATAATT
CCCAACAGCAACAATAGGTAAGCATTTTAGCTTTGAGTGTGTATTCCCTT
CAACGAGCTGTTAAACTCGAGGTAAGTGCAACTTTGCGAGTCGTCTGCGC
ACTCCTGGCCAGTTCATAAACCCAGGTGGCTTGCTGGCTCACAGTGGTAA
GAGGTTTCCCAATGTCACGTTCGATGACATGTTCTTCAGCGGCGTAGACA
CGTTTGATATATTAAATGTTTGTCGTTATCGGAATGGCCTACATTTATCC
TTTGTATCTACCGGTGTAGAATAAAGACGAGACACACTTGACCAATCCCC
CGGATACCCGATCATCTGGCAACGACGTAGACAGTGAATCAAACCTCTTT
CGAAAGATATCCGTGACTTGACGTGGTGCTGCCTGCGTTGTTGATACATA
GTTTGGGTACTTTTGCCGGCAGGTTGTGATGCAATATGTAACCTTCGGCA
TTGCAAACAGCTAGTGTACTACACGCATAGATTGTACTGATAATGGTTGT
AGCGGTGAAGATATTTCTCGAACACCGGTGAAGTAATATCGATCTCTTAT
TATGTGGGAGTTTGACGATGTTCCACTGCACCTCGACATTAGATCATTCC
TTAAGACGTATTCCCCTGGCGGAACTAAACGAGAAGCTCCATCCCTATGC
TTTCGACGTACCTCGGCCGCACGGATCCATTTTATATTTTAGCAGGGCTC
TCGCTGGAGAAGTGCTGCCGGTGATATCTATGATGTCCGTCCTGACGCCT
GATTTATCCTACCTCCTCACCTTTAACGACGTCGGTGGTCGTTCCAGCGA
GAGAAGGGGGACGCGGGGCACCTTCACCCATGGAGTTCGTACTATGTCCG
GTGGAGATAGACGCGACGTATCGCTTGAGAAGAAGATCGACCATGGCCAG
GTCTTATTCACGTCTGATTCTCTTAAGCCCGATCTATCGGGCGAGGCCCA
CACCAACGCCATGCGCAGCACCGAGCGGCTGGGTTCACACGGAACCTTTG
CACCGGGAGTCAAGATCTTCCTTGGGGGAGTGCCCCGTGACGTCCCACTC
GAGACTAAGTACGACCATGGTAAGGTGCTATACGTCTCTGATAAGCTTGA
GCCAGACCTATCGGGTGAGGCCCACACTAACACCGTGCGCAGCACCGAGC
GGTCGGGTTCACACGGAACCTTTGCGCCGGGTGTCAAGATCTTCTTCGGG
GGGATGCCCCGTGGCGTCCCGCTTGAGACTAAGTACGACCATGGTGAGGT
GCTATACGTTTCTGATAAGCTTGAGCCCGACCTATCGGGCGAGGCCCACA
CTAACGCCGCGCGCAGCACCGAGCGGCTGGGTTCACACGGAACCTTTGCA
CCGGGTGTCAAAACCTTTTTCGGGGGTGTGCCCCGTGACATTCCGCTAGA
GACTAAGTACGACCATGGTGAGGTGCTATACGTTTCTGATAAGCTTGAGC
CCGACCTATCGGGTGAGGCCCGCACCAATACTATGCGCCCCTCCGAGCGC
TTTGGGCCCCGCGGTGGATTCACGCGAGGTGTACGCCACTGGCTAGGAGG
CTTTCCTCACGACTCTCCGGTGAAAACAGAGGCTGACAATGGCGAGGTGC
ATTTCGTGCCGTTTAAAAGGAAGCCCAATCTTTCCTAAGTACGCATGACC
AACATACTTGGAGGACGAGCTGCGAGAGGCTCCGGCGCGAAGGATCGTTT
GTACTATCTGACAAAAGTGGCTGACGACCCGCTGCATATGTCTCAAATCC
GAGATACTAGCGTTCTAGCGCGAGCCTAAGGAGGCAAACAAGGCGGTTCG
TCGATTTAAATCTCCCCAACTCGTGGCAGGCGTGACGATCCTTTCGATGG
GGCATCCCAATGCACATCCTCGAGTCTAGCGGACACCCTCGGGGCTGATT
TTAAACGGGACAAATAGAATAGAGGGCGGAAGAGCAACGAAAGTGCGTTG
AGCTGAATGCCTATGTTGCCCAATTCAGGTACGTGCGTCGCCGGCACGCC
ACAACGGCGATTCATATGACGTCGCATGCCTTATAAATTTAGCTTTTGGG
TATTTCCATAGTAATATAGGAAAAACAGTTTCGAAGCGCCAATATTATTA
TCTTCTGCTGTGTGTGGAAAAGTAGGCTCTTCAGATTATTAGGCGCTATA
ACCGTTTGCGTAAATGGCACCTACTCAATAGCGCAGAGAGAAATGTGAAC
AAATTCTAAAGTTTGTGTGTATGTGCGCAGCGGCGAATTCGATCTTTCGC
CCTGATGTTCGTGGTGTTTGGGGTCTAGCGAGGATGGACTGTCAATGCAT
CATGTCGAAATACTCTCCACGAGGAAGGGTGACTGTTTTGTGTGCATGTG
CATGTGCGGAGCGGTCATTCTGCTTCTTCGCCCTGATCTCTATAATGTTT
GATGTCGAGCGAGAGTGGACTTGAAGTAATGCATCGTGTCGAAATATTAT
ATATCCACGACCGAGAGAGGATACTTCGGCCAAAAGAGTAAAGGAGTTAG
TATATTATTCTAAATTATGCATCGATAGAAGTGAGAAATAGATAATTTTG
TAATATTCAGAGATAGGAGGGAGAAATATAGAGTTGGGCAATATGTGCAT
GATAGAAGGAAGAAAAAAATATATTGGAGACTCTCAAATGTTGAGACCCG
CAATCGAATACCTGAAGAGCTTTTCATCTCAACCCAACGCACGGTGCTAG
CCTATTGTGTTTGAAAAGCAAGGGAAGTAGATATCCAGCACATCAACTGG
CTACACACGTGGATAATAAAGGGATGCCTCCACTTCTCACCAGAGCGTGA
TACATTTTAAAAAGGCTCAATAATTGTGTTCATAAACCATGACCATTCCT
AAATACCCAATTTACTAAGTGC

Coding sequence (CDS) from alignment at H-elongata_contig9590:2..3423+

>mRNA_H-elongata_contig9590.16988.1 ID=mRNA_H-elongata_contig9590.16988.1|Name=mRNA_H-elongata_contig9590.16988.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1944bp|location=Sequence derived from alignment at H-elongata_contig9590:2..3423+ (Himanthalia elongata Himel1 dioecious)
ATGGAAATAATTCCCAACAGCAACAATAGATGGAAATAATTCCCAACAGC
AACAATAGGGCTCTCGCTGGAGAAGTGCTGCCGGTGATATCTATGATGTC
CGTCCTGACGCCTGATTTATCCTACCTCCTCACCTTTAACGACGTCGGTG
GTCGTTCCAGCGAGAGAAGGGGGACGCGGGGCACCTTCACCCATGGAGTT
CGTACTATGTCCGGTGGAGATAGACGCGACGTATCGCTTGAGAAGAAGAT
CGACCATGGCCAGGTCTTATTCACGTCTGATTCTCTTAAGCCCGATCTAT
CGGGCGAGGCCCACACCAACGCCATGCGCAGCACCGAGCGGCTGGGTTCA
CACGGAACCTTTGCACCGGGAGTCAAGATCTTCCTTGGGGGAGTGCCCCG
TGACGTCCCACTCGAGACTAAGTACGACCATGGTAAGGTGCTATACGTCT
CTGATAAGCTTGAGCCAGACCTATCGGGTGAGGCCCACACTAACACCGTG
CGCAGCACCGAGCGGTCGGGTTCACACGGAACCTTTGCGCCGGGTGTCAA
GATCTTCTTCGGGGGGATGCCCCGTGGCGTCCCGCTTGAGACTAAGTACG
ACCATGGTGAGGTGCTATACGTTTCTGATAAGCTTGAGCCCGACCTATCG
GGCGAGGCCCACACTAACGCCGCGCGCAGCACCGAGCGGCTGGGTTCACA
CGGAACCTTTGCACCGGGTGTCAAAACCTTTTTCGGGGGTGTGCCCCGTG
ACATTCCGCTAGAGACTAAGTACGACCATGGTGAGGTGCTATACGTTTCT
GATAAGCTTGAGCCCGACCTATCGGGTGAGGCCCGCACCAATACTATGCG
CCCCTCCGAGCGCTTTGGGCCCCGCGGTGGATTCACGCGAGGTGTACGCC
ACTGGCTAGGAGGCTTTCCTCACGACTCTCCGGTGAAAACAGAGGCTGAC
AATGGCGAGGTGCATTTCGTGCCGTTTAAAAGGAAGCCCAATCTTTCCTA
AGGCTCTCGCTGGAGAAGTGCTGCCGGTGATATCTATGATGTCCGTCCTG
ACGCCTGATTTATCCTACCTCCTCACCTTTAACGACGTCGGTGGTCGTTC
CAGCGAGAGAAGGGGGACGCGGGGCACCTTCACCCATGGAGTTCGTACTA
TGTCCGGTGGAGATAGACGCGACGTATCGCTTGAGAAGAAGATCGACCAT
GGCCAGGTCTTATTCACGTCTGATTCTCTTAAGCCCGATCTATCGGGCGA
GGCCCACACCAACGCCATGCGCAGCACCGAGCGGCTGGGTTCACACGGAA
CCTTTGCACCGGGAGTCAAGATCTTCCTTGGGGGAGTGCCCCGTGACGTC
CCACTCGAGACTAAGTACGACCATGGTAAGGTGCTATACGTCTCTGATAA
GCTTGAGCCAGACCTATCGGGTGAGGCCCACACTAACACCGTGCGCAGCA
CCGAGCGGTCGGGTTCACACGGAACCTTTGCGCCGGGTGTCAAGATCTTC
TTCGGGGGGATGCCCCGTGGCGTCCCGCTTGAGACTAAGTACGACCATGG
TGAGGTGCTATACGTTTCTGATAAGCTTGAGCCCGACCTATCGGGCGAGG
CCCACACTAACGCCGCGCGCAGCACCGAGCGGCTGGGTTCACACGGAACC
TTTGCACCGGGTGTCAAAACCTTTTTCGGGGGTGTGCCCCGTGACATTCC
GCTAGAGACTAAGTACGACCATGGTGAGGTGCTATACGTTTCTGATAAGC
TTGAGCCCGACCTATCGGGTGAGGCCCGCACCAATACTATGCGCCCCTCC
GAGCGCTTTGGGCCCCGCGGTGGATTCACGCGAGGTGTACGCCACTGGCT
AGGAGGCTTTCCTCACGACTCTCCGGTGAAAACAGAGGCTGACAATGGCG
AGGTGCATTTCGTGCCGTTTAAAAGGAAGCCCAATCTTTCCTAA