mRNA_H-elongata_contig94831.16896.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Match: A0A6H5K5D8_9PHAE (UDENN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5D8_9PHAE) HSP 1 Score: 139 bits (351), Expect = 1.090e-36 Identity = 68/74 (91.89%), Postives = 72/74 (97.30%), Query Frame = 1
Query: 19 VRLGPRNFLRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQHVYIPLLPTPMLEYVSAPMPFVIGVR 240
VRLGPRNFLRLWSAILCERRVLLVA+EVRTLS CVHAA+A+LYPFAWQHV+IPLLPT MLEYVSAPMPFVIGVR
Sbjct: 255 VRLGPRNFLRLWSAILCERRVLLVADEVRTLSCCVHAAMAMLYPFAWQHVFIPLLPTDMLEYVSAPMPFVIGVR 328
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Match: D7FTJ7_ECTSI (UDENN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTJ7_ECTSI) HSP 1 Score: 138 bits (347), Expect = 3.750e-36 Identity = 67/74 (90.54%), Postives = 72/74 (97.30%), Query Frame = 1
Query: 19 VRLGPRNFLRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQHVYIPLLPTPMLEYVSAPMPFVIGVR 240
VRLGPRNFLRLWSAILCERRVLLVA++VRTLS CVHAA+A+LYPFAWQHV+IPLLPT MLEYVSAPMPFVIGVR
Sbjct: 153 VRLGPRNFLRLWSAILCERRVLLVADKVRTLSCCVHAAMAMLYPFAWQHVFIPLLPTDMLEYVSAPMPFVIGVR 226
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Match: D8M278_BLAHO (UDENN domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M278_BLAHO) HSP 1 Score: 87.8 bits (216), Expect = 7.030e-20 Identity = 34/73 (46.58%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 22 RLGPRNFLRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQHVYIPLLPTPMLEYVSAPMPFVIGVR 240
R ++ + L SA++CE+R++ + +E+ TLS C+HAA+AIL PF+W H++IP++P +L YV+APMPF++G++
Sbjct: 56 RFDVKSLILLLSALMCEKRIIFIGDELSTLSECIHAAVAILCPFSWHHIFIPIVPASLLSYVTAPMPFLVGIK 128
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Match: UPI001402BFCC (suppression of tumorigenicity 5 protein-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001402BFCC) HSP 1 Score: 91.7 bits (226), Expect = 8.290e-20 Identity = 40/71 (56.34%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 25 LGPRNFLRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQHVYIPLLPTPMLEYVSAPMPFVIGV 237
LGPR +R ++A+L ERRV+ A+ + LS C HAALA+LYPFAWQH Y+P+LP PM++ V +P PFV+G+
Sbjct: 752 LGPRTLVRTFAALLLERRVIFTADRLSVLSKCCHAALALLYPFAWQHTYVPVLPAPMVDIVCSPTPFVVGL 822
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Match: L8GIG9_ACACA (DENN (AEX3) domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GIG9_ACACA) HSP 1 Score: 89.0 bits (219), Expect = 7.220e-19 Identity = 40/71 (56.34%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 25 LGPRNFLRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQHVYIPLLPTPMLEYVSAPMPFVIGV 237
L P N L ++++L ERR++ ++E V TLSACV A +AILYPF+WQHV+IP+LP +L + APMPFV+GV
Sbjct: 190 LSPDNILAAFASLLVERRIIFISERVSTLSACVQACVAILYPFSWQHVFIPVLPASLLSFCCAPMPFVVGV 260
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Match: UPI0014026E17 (suppression of tumorigenicity 5 protein-like n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014026E17) HSP 1 Score: 89.0 bits (219), Expect = 7.400e-19 Identity = 40/71 (56.34%), Postives = 55/71 (77.46%), Query Frame = 1
Query: 25 LGPRNFLRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQHVYIPLLPTPMLEYVSAPMPFVIGV 237
LGPR LR++S++L ERRV+ A+++ TLS C HAA A+LYPFAWQH Y+P+LP ML+ +P PF++GV
Sbjct: 1196 LGPRQLLRVFSSLLMERRVIFTADKLSTLSKCGHAAAALLYPFAWQHTYVPVLPASMLDIACSPTPFLMGV 1266
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Match: Q6DCI3_XENLA (LOC446246 protein (Fragment) n=4 Tax=Xenopus laevis TaxID=8355 RepID=Q6DCI3_XENLA) HSP 1 Score: 87.8 bits (216), Expect = 1.850e-18 Identity = 38/66 (57.58%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 43 LRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQHVYIPLLPTPMLEYVSAPMPFVIGVR 240
L L+S++LCERR+L+ + ++ TL+ACVHA+ A+LYP WQH+YIP LP +L+Y SAPMP++IGV
Sbjct: 182 LHLYSSLLCERRILITSSKLSTLTACVHASAALLYPMYWQHIYIPTLPPHLLDYCSAPMPYLIGVH 247
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Match: A0A8C4RE84_EPTBU (UDENN domain-containing protein n=3 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4RE84_EPTBU) HSP 1 Score: 87.8 bits (216), Expect = 1.850e-18 Identity = 41/71 (57.75%), Postives = 56/71 (78.87%), Query Frame = 1
Query: 25 LGPRNFLRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQHVYIPLLPTPMLEYVSAPMPFVIGV 237
LG R+ LRL++++L ERRV+L A+++ TLS C HA +A+LYPF WQH YIP+LP ML+ V AP PF+IG+
Sbjct: 501 LGTRHLLRLFASLLLERRVILTADKLSTLSKCGHAIVALLYPFIWQHTYIPVLPVSMLDIVCAPTPFLIGL 571
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Match: F6SD79_XENTR (DENN domain-containing protein 1C n=2 Tax=Xenopus tropicalis TaxID=8364 RepID=F6SD79_XENTR) HSP 1 Score: 87.8 bits (216), Expect = 1.860e-18 Identity = 38/66 (57.58%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 43 LRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQHVYIPLLPTPMLEYVSAPMPFVIGVR 240
L L+S++LCERR+L+ + ++ TL+ACVHA+ A+LYP WQH+YIP LP +L+Y SAPMP++IGV
Sbjct: 182 LHLYSSLLCERRILITSSKLSTLTACVHASAALLYPMYWQHIYIPTLPPHLLDYCSAPMPYLIGVH 247
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Match: S4RUT0_PETMA (UDENN domain-containing protein n=1 Tax=Petromyzon marinus TaxID=7757 RepID=S4RUT0_PETMA) HSP 1 Score: 84.7 bits (208), Expect = 2.390e-18 Identity = 37/66 (56.06%), Postives = 54/66 (81.82%), Query Frame = 1
Query: 43 LRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQHVYIPLLPTPMLEYVSAPMPFVIGVR 240
L+L++++L ERR+++ + ++ TLS+C+HA +LYP +WQHVYIPLLP +LEY SAPMPF+IGV
Sbjct: 162 LQLYASLLNERRIIVTSSKISTLSSCIHALALLLYPMSWQHVYIPLLPPHLLEYCSAPMPFLIGVH 227 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94831.16896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig94831.16896.1 >prot_H-elongata_contig94831.16896.1 ID=prot_H-elongata_contig94831.16896.1|Name=mRNA_H-elongata_contig94831.16896.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=76bp MQVRLGPRNFLRLWSAILCERRVLLVAEEVRTLSACVHAALAILYPFAWQback to top mRNA from alignment at H-elongata_contig94831:1494..1733- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig94831.16896.1 ID=mRNA_H-elongata_contig94831.16896.1|Name=mRNA_H-elongata_contig94831.16896.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=240bp|location=Sequence derived from alignment at H-elongata_contig94831:1494..1733- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig94831:1494..1733- >mRNA_H-elongata_contig94831.16896.1 ID=mRNA_H-elongata_contig94831.16896.1|Name=mRNA_H-elongata_contig94831.16896.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=456bp|location=Sequence derived from alignment at H-elongata_contig94831:1494..1733- (Himanthalia elongata Himel1 dioecious)back to top |