mRNA_H-elongata_contig94654.16882.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Match: A0A6H5L5B2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5B2_9PHAE) HSP 1 Score: 196 bits (499), Expect = 1.170e-59 Identity = 96/123 (78.05%), Postives = 106/123 (86.18%), Query Frame = 1
Query: 1 GEAAHKVAISRSHTGEGGNVVEKYLEGHTPLLAGGAGYKALLVVDGETEGYVHVTAIKSWDVCAAEAVMKASGGDFTDIDGLSLKYPMEYDSDHSQALFKNGIIAAQTQEQHKYFVDKLGGHM 369
GEAAH V ISRSHTGEGGNVVEKYLEGH LLAGGAGYK+LLV+DG+ E YVHVTAIKSWDVCAAEAVMKASGG F+DI+G L YPMEYDS HSQALFKNGIIA ++EQ +FV KL G++
Sbjct: 249 GEAAHTVTISRSHTGEGGNVVEKYLEGHQTLLAGGAGYKSLLVLDGKAEAYVHVTAIKSWDVCAAEAVMKASGGGFSDIEGKQLAYPMEYDSTHSQALFKNGIIATASKEQQDFFVTKLDGNL 371
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Match: A0A835YUA7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA7_9STRA) HSP 1 Score: 140 bits (352), Expect = 2.690e-38 Identity = 72/124 (58.06%), Postives = 87/124 (70.16%), Query Frame = 1
Query: 1 GEAAHKVAISRSHTGEGGNVVEKYLEGHTPLLAGGAGYKALLVVDGETEGYVHVTAIKSWDVCAAEAVMKASGGDFTDIDGLSLKYPMEYDSDHSQALFKNGIIAAQTQEQHKYFVDKLGGHMK 372
GEAA VAISRSHTG G +VV KYL GH L AGGAG+KALLVVDG YVHVT IKSWDVCAA+AV+ A GG FTD DG LKY E +F +GI+A Q+ E ++++ LGG+++
Sbjct: 193 GEAAETVAISRSHTGAGEDVVTKYLPGHKSLQAGGAGFKALLVVDGVANAYVHVTKIKSWDVCAADAVLHAIGGGFTDADGQHLKYNTE------DTVFTHGIVATQSAESQAWYLEHLGGNLE 310
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Match: A0A835YRT6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT6_9STRA) HSP 1 Score: 137 bits (345), Expect = 8.600e-37 Identity = 69/123 (56.10%), Postives = 86/123 (69.92%), Query Frame = 1
Query: 1 GEAAHKVAISRSHTGEGGNVVEKYLEGHTPLLAGGAGYKALLVVDGETEGYVHVTAIKSWDVCAAEAVMKASGGDFTDIDGLSLKYPMEYDSDHSQALFKNGIIAAQTQEQHKYFVDKLGGHM 369
G+A VAISRSHTG G +VV K GH PLLAGGAGYKALLV+DG YVHVT IK+WDVCAA+AV+ A GG FTD+DG LKY E +FK G++A Q++ ++++ LGG+M
Sbjct: 243 GDAETTVAISRSHTGAGEDVVTKRFPGHRPLLAGGAGYKALLVLDGTANAYVHVTKIKAWDVCAADAVLHAIGGGFTDVDGKRLKYLAE------DPVFKRGVVATQSKVSQAWYLEHLGGNM 359
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Match: W7TL13_9STRA (Myo inositol monophosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TL13_9STRA) HSP 1 Score: 121 bits (303), Expect = 2.500e-30 Identity = 61/116 (52.59%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 10 AHKVAISRSHTGEGGNVVEKYLEGHTPLLAGGAGYKALLVVDGETEGYVHVTAIKSWDVCAAEAVMKASGGDFTDIDGLSLKYPMEYDSDHSQALFKNGIIAAQTQEQHKYFVDKL 357
A KV ISRSHTG G +VV +YL G P+ AGG+GYKAL V++G+ YVHVT IKSWDVCAA+AV+ A+GG FT++ G L Y + L GIIAA + H ++V+KL
Sbjct: 279 ADKVVISRSHTGSGADVVSEYLPGKQPVFAGGSGYKALRVLEGDANAYVHVTKIKSWDVCAADAVVHAAGGKFTNLKGERLVYEKD------DPLISGGIIAAADSKMHAWYVEKL 388
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Match: A0A7S2SAR3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAR3_9STRA) HSP 1 Score: 115 bits (289), Expect = 5.050e-29 Identity = 58/122 (47.54%), Postives = 79/122 (64.75%), Query Frame = 1
Query: 1 GEAAHKVAISRSHTGEGGNVVEKYLEGHTPLLAGGAGYKALLVVDGETEGYVHVTAIKSWDVCAAEAVMKASGGDFTDIDGLSLKYPMEYDSDHSQALFKNGIIAAQTQEQHKYFVDKLGGH 366
G+AA V +SRSHTGEG +VE YL G T L AGGAGYKALLV G E Y+HVT K WD CAA+AV+ A GG+FT ++G +KY D + + ++G + A + + H++ + +L H
Sbjct: 162 GDAASTVTLSRSHTGEGAAMVEAYLPGRTSLPAGGAGYKALLVAGGSAEAYLHVTKSKIWDACAADAVIHAIGGEFTQLNGDPVKY------DPTDPVLRHGFLGASSPKSHEWHLGRLKEH 277
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Match: A0A1I7RKV4_BURXY ((pine wood nematode) hypothetical protein n=1 Tax=Bursaphelenchus xylophilus TaxID=6326 RepID=A0A1I7RKV4_BURXY) HSP 1 Score: 93.6 bits (231), Expect = 3.070e-20 Identity = 51/101 (50.50%), Postives = 66/101 (65.35%), Query Frame = 1
Query: 19 VAISRSHTGEGGNVVEKYLEG-HTPLLAGGAGYKALLVVDGETEGYVHVTAIKSWDVCAAEAVMKASGGDFTDIDGLSLKYPMEYDSDHSQALFKNGIIAA 318
+ +SRSHTG+ + EK G +T AGGAGYKAL V++G YVH TAIK WDVCAA+A+M+A+GG D+DG L Y D S A+ KNG++ A
Sbjct: 235 IVVSRSHTGKVKEIAEKAFGGEYTVEPAGGAGYKALRVLNGTAAFYVHTTAIKKWDVCAADALMRAAGGKLMDLDGQPLLY-----QDRSVAMNKNGLMVA 330
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Match: A0A6J2YAL2_SITOR (putative inositol monophosphatase 3 n=1 Tax=Sitophilus oryzae TaxID=7048 RepID=A0A6J2YAL2_SITOR) HSP 1 Score: 92.0 bits (227), Expect = 8.330e-20 Identity = 48/114 (42.11%), Postives = 67/114 (58.77%), Query Frame = 1
Query: 16 KVAISRSHTGEGGNVVEKYLEGHTPLLAGGAGYKALLVVDGETEGYVHVTAIKSWDVCAAEAVMKASGGDFTDIDGLSLKYPMEYDSDHSQALFKNGIIAAQTQEQHKYFVDKL 357
K ISRSH G +EK + + ++A GAGYK L V GE + Y+H+TAIK WD+CA A+++A GG T DG L Y D + + K+G+IA T + H +F +KL
Sbjct: 214 KFIISRSHRGTVEQALEKNFKNYEVVIAAGAGYKVLKVAKGEVDAYIHITAIKKWDICAGNAILRALGGQMTTKDGQLLTY-----LDDTDVVNKDGLIA--TLKYHDFFTNKL 320
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Match: A0A7J7K5K9_BUGNE (IMPAD1 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7K5K9_BUGNE) HSP 1 Score: 90.5 bits (223), Expect = 5.340e-19 Identity = 47/115 (40.87%), Postives = 69/115 (60.00%), Query Frame = 1
Query: 16 KVAISRSHTGEGGNVVEKYLEGHTPLLAGGAGYKALLVVDGETEGYVHVTAIKSWDVCAAEAVMKASGGDFTDIDGLSLKYPMEYDSDHSQALFKNGIIAAQTQEQHKYFVDKLG 360
K+ ISRSH G+G +V++ G + AGGAGYKA+ V+ G+ + Y HVT IK WD+CA A++ A GG + ++ Y E S L KNG++A+ + Y++DKLG
Sbjct: 254 KIIISRSHKGDGEEIVKQAFGGGKVISAGGAGYKAVEVIRGKADVYAHVTLIKKWDICAGNALLNAVGGKMKTLKNETITYDKE-----SGPLNKNGLLASMSH--FNYYLDKLG 361
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Match: A0A811JSE9_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811JSE9_9BILA) HSP 1 Score: 88.6 bits (218), Expect = 4.800e-18 Identity = 49/104 (47.12%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 16 KVAISRSHTGEGGNVVEKYLEG-HTPLLAGGAGYKALLVVDGETEGYVHVTAIKSWDVCAAEAVMKASGGDFTDIDGLSLKYPMEYDSDHSQALFKNGIIAAQT 324
K+ +SRSHTG+ + E G +T AGGAGYK L V++G YVH TAIK WDVCAA+A+M+A+ G D++G L Y D S AL KNG++ T
Sbjct: 234 KIVVSRSHTGKVKEIAESAFGGEYTVEPAGGAGYKTLRVLNGTAAFYVHTTAIKKWDVCAADALMRAANGKLMDLEGQLLLY-----QDRSTALNKNGLMTGFT 332
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Match: A0A8K0KBH8_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KBH8_LADFU) HSP 1 Score: 87.0 bits (214), Expect = 7.810e-18 Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 1
Query: 19 VAISRSHTGEGGNVVEKYLEGHTPLL-AGGAGYKALLVVDGETEGYVHVTAIKSWDVCAAEAVMKASGGDFTDIDGLSLKYPMEYDSDHSQALFKNGIIAAQTQEQHKYFVDKL 357
+ +SRSH GE N+ + + AGGAGYK L V++G YVHVTAIK WD+CA +A++++ GG+ T IDG L Y S S + G+IA T + H +F+++L
Sbjct: 225 IIVSRSHAGEVKNISQIAFGSDIDVTSAGGAGYKVLEVINGNASAYVHVTAIKKWDICAGDALLRSVGGNMTKIDGHELDY-----SAKSSQFNRGGLIA--TLQDHLWFIERL 331 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig94654.16882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig94654.16882.1 >prot_H-elongata_contig94654.16882.1 ID=prot_H-elongata_contig94654.16882.1|Name=mRNA_H-elongata_contig94654.16882.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp GEAAHKVAISRSHTGEGGNVVEKYLEGHTPLLAGGAGYKALLVVDGETEGback to top mRNA from alignment at H-elongata_contig94654:124..2030- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig94654.16882.1 ID=mRNA_H-elongata_contig94654.16882.1|Name=mRNA_H-elongata_contig94654.16882.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1907bp|location=Sequence derived from alignment at H-elongata_contig94654:124..2030- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig94654:124..2030- >mRNA_H-elongata_contig94654.16882.1 ID=mRNA_H-elongata_contig94654.16882.1|Name=mRNA_H-elongata_contig94654.16882.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at H-elongata_contig94654:124..2030- (Himanthalia elongata Himel1 dioecious)back to top |