mRNA_H-elongata_contig93848.16818.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig93848.16818.1
Unique NamemRNA_H-elongata_contig93848.16818.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: A0A836C811_9STRA (ArgK protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C811_9STRA)

HSP 1 Score: 236 bits (603), Expect = 3.760e-74
Identity = 117/151 (77.48%), Postives = 131/151 (86.75%), Query Frame = 1
Query:  352 VGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
            VGIAGPPGAGKS+FIE LG  L  AG RVAVI+VDPSS+R+GGSILGDKTRM ELSR P AFVR CP+GGVLGGI+ +TH VVLLCQAA YD VIVETVGLGQSEVEVE  VD+L L+LPPA GDDLQGSKKGI+E AD +VVNK+DG+L+
Sbjct:    1 VGIAGPPGAGKSTFIEALGLRLVQAGKRVAVISVDPSSLRSGGSILGDKTRMQELSRTPNAFVRACPSGGVLGGIAAHTHSVVLLCQAARYDVVIVETVGLGQSEVEVEQTVDVLTLLLPPASGDDLQGSKKGIIEAADLVVVNKADGELE 151          
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: W7TPV1_9STRA (Methylmalonic aciduria type a mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TPV1_9STRA)

HSP 1 Score: 235 bits (599), Expect = 1.170e-71
Identity = 130/224 (58.04%), Postives = 163/224 (72.77%), Query Frame = 1
Query:  136 TTVESNRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELG-LRVGIAGPPGAGKSSFIEVLGKNLTAAGN-RVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDL 801
            T +ES +  HR  A+ LLD V+  R+       RR R+   +    S  + +   D   +G + TS  +  LRVGIAGPPGAGKS+FIE LGK LT +   RVAVI VDPSS R+GGSILGDKTRM+EL++DP+AFVR CP  GVLGG++RYT++VVLLCQAA +D V +E+VGLGQSE  ++ A DMLLL++PPAGGD+LQG KKGI+EVAD IVVNK+DG L
Sbjct:   68 TLIESTKESHRLDAEALLDHVVYERS-------RRVREKGRLKPGNSTSNAACVAD---EGRIGTSENVRPLRVGIAGPPGAGKSTFIEALGKYLTDSKKLRVAVIAVDPSSSRSGGSILGDKTRMYELAKDPKAFVRACPTSGVLGGVARYTNDVVLLCQAASFDIVFIESVGLGQSETIIDQASDMLLLLVPPAGGDELQGVKKGIMEVADVIVVNKADGHL 281          
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: W2HAL9_PHYPR (LAO/AO transport system ATPase, variant 4 n=5 Tax=Phytophthora parasitica TaxID=4792 RepID=W2HAL9_PHYPR)

HSP 1 Score: 219 bits (557), Expect = 2.150e-67
Identity = 104/158 (65.82%), Postives = 134/158 (84.81%), Query Frame = 1
Query:  334 PEL-GLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
            PEL   R+GIAGPPGAGKS+FIE LG  LTA G++VAV+ +DPSS R+GGSILGDKTRM +LS DP AFVR  P+ G LGG++++T+E+VLLC+A GYD ++VE+VGLGQSE+ ++  VDM++L++ PAGGDDLQG KKGIVE+AD +VVNK+DGDL+
Sbjct:   93 PELTSFRLGIAGPPGAGKSTFIETLGLFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVSPAGGDDLQGQKKGIVEIADIVVVNKADGDLK 250          
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: A0A8K1CFL8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CFL8_PYTOL)

HSP 1 Score: 222 bits (565), Expect = 2.200e-67
Identity = 118/223 (52.91%), Postives = 153/223 (68.61%), Query Frame = 1
Query:  136 TTVESNRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
            T VES       QA++LLD+VL  R    R    R  KL  +                             R+GIAGPPGAGKS+FIE LG+ LT  G++VAV+ +DPSS RTGGSILGDKTRM  LS DP AFVR  P+ G LGG++++T+++VLLC+AAGYD V+VE+VGLGQSE+ ++  VDM++L++PPAGGD+LQGSKKGI+E+AD +VVNK+DGDL+
Sbjct:   39 TLVESTLKSDGEQAELLLDEVLKRR----RDIRNRQTKLQALPS--------------------------FRLGIAGPPGAGKSTFIEALGQYLTKKGHKVAVLAIDPSSSRTGGSILGDKTRMTYLSNDPNAFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIVLVESVGLGQSEIVIDDTVDMVMLLVPPAGGDELQGSKKGIMEIADIVVVNKADGDLK 231          
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: A0A2D4BST0_PYTIN (LAO/AO transport system ATPase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BST0_PYTIN)

HSP 1 Score: 220 bits (560), Expect = 9.610e-67
Identity = 106/166 (63.86%), Postives = 139/166 (83.73%), Query Frame = 1
Query:  316 GSVETSPELGL---RVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
            G    S  LGL   R+GIAGPPGAGKS+FIE LG++LT  G++VAV+ +DPSS R+GGSILGDKTRM  LS DP AFVR  P+ G LGG++++T+++VLLC+AAGYD V+VE+VGLGQSE+ ++  VDM++L++PPAGGD+LQGSKKGI+E+AD IVVNK+DG+L+
Sbjct:   55 GHARQSSSLGLPSFRLGIAGPPGAGKSTFIESLGQHLTERGHKVAVLAIDPSSSRSGGSILGDKTRMTNLSNDPNAFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIVLVESVGLGQSEIIIDDTVDMVMLLVPPAGGDELQGSKKGIMEIADVIVVNKADGELK 220          
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: W2LL69_PHYPR (LAO/AO transport system ATPase, variant 3 n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=W2LL69_PHYPR)

HSP 1 Score: 219 bits (557), Expect = 1.210e-66
Identity = 104/158 (65.82%), Postives = 134/158 (84.81%), Query Frame = 1
Query:  334 PEL-GLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
            PEL   R+GIAGPPGAGKS+FIE LG  LTA G++VAV+ +DPSS R+GGSILGDKTRM +LS DP AFVR  P+ G LGG++++T+E+VLLC+A GYD ++VE+VGLGQSE+ ++  VDM++L++ PAGGDDLQG KKGIVE+AD +VVNK+DGDL+
Sbjct:   93 PELTSFRLGIAGPPGAGKSTFIETLGLFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNEIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVSPAGGDDLQGQKKGIVEIADIVVVNKADGDLK 250          
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: G4ZEZ6_PHYSP (AAA domain-containing protein n=21 Tax=Phytophthora TaxID=4783 RepID=G4ZEZ6_PHYSP)

HSP 1 Score: 218 bits (556), Expect = 3.230e-66
Identity = 114/222 (51.35%), Postives = 154/222 (69.37%), Query Frame = 1
Query:  136 TTVESNRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDL 801
            T VES       QA++LLD VL+          RR+ K +                      V+ +     R+GIAGPPGAGKS+FIE LG+ LTA G++VAV+ +DPSS R+GGSILGDKTRM +LS DP AFVR  P+ G LGG++++T+++VLLC+A GYD ++VE+VGLGQSE+ ++  VDM++L++PPAGGD+LQG KKGIVE+AD +VVNK+DG+L
Sbjct:   25 TLVESTLKSDEEQAELLLDSVLAQ---------RRSLKPA---------------------HVDQAGLTSFRLGIAGPPGAGKSTFIETLGQFLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPSRGTLGGVAQHTNDIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVPPAGGDELQGQKKGIVEIADIVVVNKADGEL 216          
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: H3GW23_PHYRM (AAA domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3GW23_PHYRM)

HSP 1 Score: 219 bits (557), Expect = 4.500e-66
Identity = 114/222 (51.35%), Postives = 154/222 (69.37%), Query Frame = 1
Query:  136 TTVESNRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDL 801
            T VES       QA++LLD VL+          RR+ K +                      V+++     R+GIAGPPGAGKS+FIE LG+ LTA G++VAV+ +DPSS R+GGSILGDKTRM +LS DP AFVR  P  G LGG++++T+++VLLC+A GYD ++VE+VGLGQSE+ ++  VDM++L++PPAGGD+LQG KKGIVE+AD +VVNK+DG+L
Sbjct:   50 TLVESTLKSDEEQAELLLDSVLAQ---------RRSLKPT---------------------HVDSAGLTSFRLGIAGPPGAGKSTFIETLGQLLTAQGHKVAVLAIDPSSSRSGGSILGDKTRMEKLSNDPNAFVRPSPTRGTLGGVAQHTNDIVLLCEAGGYDIILVESVGLGQSEIVIDDTVDMVMLLVPPAGGDELQGQKKGIVEIADIVVVNKADGEL 241          
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: A0A8J4ZXX0_9CHEL (Methylmalonic aciduria type A, mitochondrial n=1 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J4ZXX0_9CHEL)

HSP 1 Score: 219 bits (557), Expect = 7.790e-66
Identity = 108/211 (51.18%), Postives = 144/211 (68.25%), Query Frame = 1
Query:  169 HQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDL 801
            HQ   L + +    +  P    +    LS IL     + +             ++     R+G++GPPGAGKS+FIE +GK LTA G++VAV+ VDPSS  TGGS+LGDKTRMHEL+RDP AF+R  PA G LGG++R T+E ++LC+ AGYD +IVETVG+GQSE +V   VDM  L++PPAGGD+LQG K+GIVE++D I+VNK+DGDL
Sbjct:   64 HQRSTLAESITLVESIHPVKKKQAKLLLSSILSRFKSKEIE----------TSSTSSFSFRIGLSGPPGAGKSTFIEAIGKFLTAQGHKVAVLAVDPSSSTTGGSLLGDKTRMHELTRDPNAFIRPSPASGHLGGVTRTTNESIVLCETAGYDIIIVETVGVGQSEFKVADMVDMFCLLIPPAGGDELQGIKRGIVELSDLIIVNKADGDL 264          
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Match: A0A5D6Y0Y2_9STRA (AAA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0Y2_9STRA)

HSP 1 Score: 218 bits (556), Expect = 8.380e-66
Identity = 115/223 (51.57%), Postives = 154/223 (69.06%), Query Frame = 1
Query:  136 TTVESNRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGCDGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVITVDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVVLLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKGIVEVADAIVVNKSDGDLQ 804
            T VES+      QA++LLD VL+ R    R    + ++  G+                             RVGIAGPPGAGKS+FIE LG+ LTA  ++VAV+ +DPSS RTGGSILGDKTRM  LS DP AFVR  P+ G LGG++++T+++VLLC+AAGYD ++VE+VGLGQSE+ ++  VDM++L++PPAGGD+LQGSKKGI+E+AD +VVNK+DG L+
Sbjct:   58 TLVESSLKSDEQQAELLLDAVLTHR----REANAKEKEFRGLPT--------------------------FRVGIAGPPGAGKSTFIETLGQFLTAKNHKVAVLAIDPSSSRTGGSILGDKTRMTYLSNDPHAFVRPSPSRGTLGGVAQHTNDIVLLCEAAGYDIILVESVGLGQSEIVIDDTVDMVMLLVPPAGGDELQGSKKGIMEIADLVVVNKADGALE 250          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93848.16818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C811_9STRA3.760e-7477.48ArgK protein (Fragment) n=1 Tax=Tribonema minus Ta... [more]
W7TPV1_9STRA1.170e-7158.04Methylmalonic aciduria type a mitochondrial n=2 Ta... [more]
W2HAL9_PHYPR2.150e-6765.82LAO/AO transport system ATPase, variant 4 n=5 Tax=... [more]
A0A8K1CFL8_PYTOL2.200e-6752.91Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4BST0_PYTIN9.610e-6763.86LAO/AO transport system ATPase n=1 Tax=Pythium ins... [more]
W2LL69_PHYPR1.210e-6665.82LAO/AO transport system ATPase, variant 3 n=6 Tax=... [more]
G4ZEZ6_PHYSP3.230e-6651.35AAA domain-containing protein n=21 Tax=Phytophthor... [more]
H3GW23_PHYRM4.500e-6651.35AAA domain-containing protein n=8 Tax=Phytophthora... [more]
A0A8J4ZXX0_9CHEL7.790e-6651.18Methylmalonic aciduria type A, mitochondrial n=1 T... [more]
A0A5D6Y0Y2_9STRA8.380e-6651.57AAA domain-containing protein n=1 Tax=Pythium bras... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig93848contigH-elongata_contig93848:155..2530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score219.2
Seed ortholog evalue2.4e-54
Seed eggNOG ortholog325452.fgenesh_scip_prom.46568.9624
Preferred nameMMAA
KEGG koko:K07588
GOsGO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009235,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0017144,GO:0019001,GO:0031974,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033013,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044281,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0046983,GO:0051186,GO:0070013,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901564
EggNOG free text desc.ArgK protein
EggNOG OGs2QR2W@2759,3Q7DD@4776,COG1703@1
COG Functional cat.E
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Hectar predicted targeting categoryother localisation
Exons5
Model size810
Cds size810
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig93848.16818.1prot_H-elongata_contig93848.16818.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig93848 155..2530 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931334.7372968-CDS-H-elongata_contig93848:154..2281622931334.7372968-CDS-H-elongata_contig93848:154..228Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93848 155..228 -
1691679794.4377563-CDS-H-elongata_contig93848:154..2281691679794.4377563-CDS-H-elongata_contig93848:154..228Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93848 155..228 -
1622931334.7980862-CDS-H-elongata_contig93848:728..7981622931334.7980862-CDS-H-elongata_contig93848:728..798Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93848 729..798 -
1691679794.448381-CDS-H-elongata_contig93848:728..7981691679794.448381-CDS-H-elongata_contig93848:728..798Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93848 729..798 -
1622931334.812902-CDS-H-elongata_contig93848:1082..12181622931334.812902-CDS-H-elongata_contig93848:1082..1218Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93848 1083..1218 -
1691679794.4566977-CDS-H-elongata_contig93848:1082..12181691679794.4566977-CDS-H-elongata_contig93848:1082..1218Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93848 1083..1218 -
1622931334.867848-CDS-H-elongata_contig93848:1669..18001622931334.867848-CDS-H-elongata_contig93848:1669..1800Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93848 1670..1800 -
1691679794.4652715-CDS-H-elongata_contig93848:1669..18001691679794.4652715-CDS-H-elongata_contig93848:1669..1800Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93848 1670..1800 -
1622931334.88689-CDS-H-elongata_contig93848:2131..25301622931334.88689-CDS-H-elongata_contig93848:2131..2530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93848 2132..2530 -
1691679794.4745128-CDS-H-elongata_contig93848:2131..25301691679794.4745128-CDS-H-elongata_contig93848:2131..2530Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig93848 2132..2530 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig93848.16818.1

>prot_H-elongata_contig93848.16818.1 ID=prot_H-elongata_contig93848.16818.1|Name=mRNA_H-elongata_contig93848.16818.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp
PQASSLKPPPPPPPPSPPSRPPPCLCLPRALLASKYRICRSLCRRTTVES
NRLDHRHQADMLLDKVLSARTAAPRSPPRRARKLSGILDTLSDRSVSLGC
DGEADGSVETSPELGLRVGIAGPPGAGKSSFIEVLGKNLTAAGNRVAVIT
VDPSSMRTGGSILGDKTRMHELSRDPRAFVRGCPAGGVLGGISRYTHEVV
LLCQAAGYDPVIVETVGLGQSEVEVEHAVDMLLLMLPPAGGDDLQGSKKG
IVEVADAIVVNKSDGDLQK*
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mRNA from alignment at H-elongata_contig93848:155..2530-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig93848.16818.1 ID=mRNA_H-elongata_contig93848.16818.1|Name=mRNA_H-elongata_contig93848.16818.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2376bp|location=Sequence derived from alignment at H-elongata_contig93848:155..2530- (Himanthalia elongata Himel1 dioecious)
CCACAAGCGTCTTCTCTCAAGCCCCCCCCCCCCCCCCCCCCCCCCTCCCC TCCCTCCCGTCCTCCCCCGTGTCTTTGTCTCCCGCGCGCACTCCTTGCGT CGAAATACCGAATCTGCCGATCCCTTTGTCGACGGACCACAGTGGAATCA AACAGGCTGGACCACAGGCATCAAGCAGACATGCTTCTCGACAAGGTCCT ATCCGCTCGAACCGCCGCACCCCGTTCTCCTCCACGCCGAGCGCGAAAAC TCTCGGGCATCCTTGATACCCTAAGCGATCGTTCGGTGTCTCTTGGTTGT GACGGTGAGGCAGACGGAAGCGTGGAGACGTCTCCGGAGCTGGGGCTGAG GGTTGGAATTGCGGGGCCGCCAGGCGCGGGAAAGAGTTCCTTCATCGAAG TGAGAACATGGTAGTCGTTTACTGTTAGTGAGCGTTGGATGGGGGGGGGA GTATGTGACGCCTGTGGGTGCAGGTAAATTCTGTGGGGTCCCGCGCGTCC ATCCGTTGCCAGTACGGTGGCTCTGTAAACGACTTTCAATCGCCTCGAAC CACGAAAGATGCGCCGTGCCAACCAACCGCCTTATTGTTGCAGGAGAGAT GAGATACAAGCGTGGACAGGACGGGGAGGGGCTGGGCTTTTATGCATTTC CTGCCTTGTCCGGCGCCTGTCTCCTGCGTTGCTTGGCCTCGGCCTCTCCG ATCATGACAGCATTGTTCCGTGCGTGACAGGTGCTTGGCAAAAATCTTAC CGCCGCGGGCAACCGGGTCGCAGTGATCACTGTAGACCCTTCAAGCATGC GTACGGGTGGTTCGATCCTGGGCGACAAGACAAGGATGCACGAGCTGTCG AGGGACCCGAGGTGCGTTTAAATGCAATAATCCTCTCTCTTTTTCCTTTA TACATTTCCCCCTTATCCTTGACGCCGCTCGAAGCAGCGTCAGCCACAGC AGCGGCGACTCGCGCCCCGATAGTGTGACGGACGCGTTAGACCGATTCGT GCATGCTGAAAGAAAAGTATCGAACGAGAGGCAGGGAATGGATTGCTGTG AAGCAGATACGAAGTACGACGAAAGAAAGGGAATGTATTGCTGATAAAGC TTGTGAAGATTTGAGAGAGGAGGATTCACGCCCCACCAGTTCCCACCGCT GGAGACCGAGACGTCGAATAGACGACCGCCGGGGTGGAAAACGGCAGTAT TATCGATTTGCCTCAAATCGATCAGGGCCAAACAAGCTGTCCTCGTCTCC CCTCGTTCGCCCCCCCCCCCCGCCGCCTCCCAACACCCTTCGCACGTTAT CGCGCTTTTCAGAGCGTTTGTTCGCGGGTGCCCAGCGGGGGGTGTGCTGG GGGGCATCTCTCGATACACTCACGAAGTGGTTCTCTTGTGCCAGGCTGCC GGATACGATCCTGTTATCGTCGAAACAGTCGGACTGGGACAAAGCGAGGT TCGATCCTATTCACGACCCAAAGAGCAACGGGTTGGCTTCTTGCATCCTC GGCCATTACCGTGCTGATATATGATAATGTTACTCTGTTATGTCAAGCGT TTCCTTTTCGGAGTTGACTACCGGGATTCCTCGTCTAATGGGGTATATGC AAACGCCTGTTAAAAACAAGGGGTGAAGAGTTGGTTGATGACCAACTGAT TTATGTTTCGGGCCGGGGGCGCTTTTTTCCGGGGGGACGGGGGGCGGGGG GGATTTTTGCGTCACGACTGTCGCGTCCCTAGGTGGAGGTGGAGCATGCG GTCGACATGCTGCTGTTAATGCTTCCACCGGCCGGCGGCGACGATCTGCA AGGTTTGTGGCCAAGGAGAGTTCAAAGCTACGTTCCGGATGTAGGCACAG GAGCGCGCATATCATGTTGGTTGTGGGATCCCGAATCTTATTGCAAGAGA GCTATGTATAAATATATGTATATATAGTGCGTGAACAGGAGGTCGATTGC TCTACCATTTATTTAGTATATTTTCGCCGCCGCCGCCGTCGCCGCTTCGA AACCAGTAAGTTCCGCCTGTGGTCGAACGGCACGGGAAAAAGGGGAGACG ATGGATGGACGCTTTTAATTTATCACGATTTCTGTACAAAATCCTAATGG TCGGACCGATTGGCGATCCCCCCTCCCCTCTCCCGATCCCAAGCAACTAC ACGTGCTTAAACCTGTGCATGCTCCACCTCAACTGACCGCTGCTGCTGTT GCTGCTGCCGTTGCTGTCGCGGCTATTGTGTCATTGTATTCTGCTGGCGC GCACGTGTTGGGGCTGCCTTCCTTCGTTTCATCCGAGCGGTCTTCGGTGC AGGGTCCAAGAAGGGCATCGTGGAGGTTGCGGACGCCATCGTCGTCAACA AATCGGATGGCGACCTTCAAAAGTGA
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Coding sequence (CDS) from alignment at H-elongata_contig93848:155..2530-

>mRNA_H-elongata_contig93848.16818.1 ID=mRNA_H-elongata_contig93848.16818.1|Name=mRNA_H-elongata_contig93848.16818.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1620bp|location=Sequence derived from alignment at H-elongata_contig93848:155..2530- (Himanthalia elongata Himel1 dioecious)
CCACAAGCGTCTTCTCTCAAGCCCCCCCCCCCCCCCCCCCCCCCCTCCCC
TCCCTCCCGTCCTCCCCCGTGTCTTTGTCTCCCGCGCGCACTCCTTGCGT
CGAAATACCGAATCTGCCGATCCCTTTGTCGACGGACCACAGTGGAATCA
AACAGGCTGGACCACAGGCATCAAGCAGACATGCTTCTCGACAAGGTCCT
ATCCGCTCGAACCGCCGCACCCCGTTCTCCTCCACGCCGAGCGCGAAAAC
TCTCGGGCATCCTTGATACCCTAAGCGATCGTTCGGTGTCTCTTGGTTGT
GACGGTGAGGCAGACGGAAGCGTGGAGACGTCTCCGGAGCTGGGGCTGAG
GGTTGGAATTGCGGGGCCGCCAGGCGCGGGAAAGAGTTCCTTCATCGAAC
CACAAGCGTCTTCTCTCAAGCCCCCCCCCCCCCCCCCCCCCCCCTCCCCT
CCCTCCCGTCCTCCCCCGTGTCTTTGTCTCCCGCGCGCACTCCTTGCGTC
GAAATACCGAATCTGCCGATCCCTTTGTCGACGGACCACAGTGGAATCAA
ACAGGCTGGACCACAGGCATCAAGCAGACATGCTTCTCGACAAGGTCCTA
TCCGCTCGAACCGCCGCACCCCGTTCTCCTCCACGCCGAGCGCGAAAACT
CTCGGGCATCCTTGATACCCTAAGCGATCGTTCGGTGTCTCTTGGTTGTG
ACGGTGAGGCAGACGGAAGCGTGGAGACGTCTCCGGAGCTGGGGCTGAGG
GTTGGAATTGCGGGGCCGCCAGGCGCGGGAAAGAGTTCCTTCATCGAAGT
GCTTGGCAAAAATCTTACCGCCGCGGGCAACCGGGTCGCAGTGATCACTG
TAGACCCTTCAAGCATGCGTACGGGTGGTTCGATCCTGGGCGACAAGACA
AGGATGCACGAGCTGTCGAGGGACCCGAGGTGCTTGGCAAAAATCTTACC
GCCGCGGGCAACCGGGTCGCAGTGATCACTGTAGACCCTTCAAGCATGCG
TACGGGTGGTTCGATCCTGGGCGACAAGACAAGGATGCACGAGCTGTCGA
GGGACCCGAGAGCGTTTGTTCGCGGGTGCCCAGCGGGGGGTGTGCTGGGG
GGCATCTCTCGATACACTCACGAAGTGGTTCTCTTGTGCCAGGCTGCCGG
ATACGATCCTGTTATCGTCGAAACAGTCGGACTGGGACAAAGCGAGAGCG
TTTGTTCGCGGGTGCCCAGCGGGGGGTGTGCTGGGGGGCATCTCTCGATA
CACTCACGAAGTGGTTCTCTTGTGCCAGGCTGCCGGATACGATCCTGTTA
TCGTCGAAACAGTCGGACTGGGACAAAGCGAGGTGGAGGTGGAGCATGCG
GTCGACATGCTGCTGTTAATGCTTCCACCGGCCGGCGGCGACGATCTGCA
AGGTGGAGGTGGAGCATGCGGTCGACATGCTGCTGTTAATGCTTCCACCG
GCCGGCGGCGACGATCTGCAAGGGTCCAAGAAGGGCATCGTGGAGGTTGC
GGACGCCATCGTCGTCAACAAATCGGATGGCGACCTTCAAAAGTGAGGTC
CAAGAAGGGCATCGTGGAGGTTGCGGACGCCATCGTCGTCAACAAATCGG
ATGGCGACCTTCAAAAGTGA
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