mRNA_H-elongata_contig93666.16798.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Match: D8LE65_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE65_ECTSI) HSP 1 Score: 193 bits (490), Expect = 1.340e-58 Identity = 109/136 (80.15%), Postives = 122/136 (89.71%), Query Frame = 1
Query: 1 EKVFEDLPEGFHNDVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSLPPGDIFVQVSAGDRHTCGIKIDQTVACWGHIRLAPRGXXXXXXXXXXXXXXXXXXXXXXXXXDDIGRSTSGMPHDALYVQVM 408
E VFEDLPEGFH+D+DSIT+A GGHHTCALEYRPGVDFGGPVRCWGR+DWGQS+P DIFVQVSAG+RHTCGIKIDQTV+CWGH+ +PRG XXXXXXXXXXXXXXXXXXXXXXDDI STSG+P + +VQV+
Sbjct: 50 EVVFEDLPEGFHDDIDSITVAVGGHHTCALEYRPGVDFGGPVRCWGRDDWGQSMPSDDIFVQVSAGNRHTCGIKIDQTVSCWGHMPFSPRGFFQXXXXXXXXXXXXXXXXXXXXXXDDIAGSTSGVPANTTFVQVV 185
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Match: A0A7S1UCR5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCR5_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.640e-27 Identity = 44/82 (53.66%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 10 FEDLPEGFHNDVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSLPPGDIFVQVSAGDRHTCGIKIDQTVACWGHI 255
F +LPEGFH D+D ++++ G +H CA+EY GGP+RCWG N GQS PPG F+QVSAG HTC + +DQT+ CWG +
Sbjct: 27 FTELPEGFHADLDEVSVSVGEYHACAIEYDETQPMGGPLRCWGGNTEGQSDPPGGTFMQVSAGAMHTCALSVDQTIECWGRV 108
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Match: A0A7S2SKA4_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA4_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.440e-27 Identity = 47/80 (58.75%), Postives = 60/80 (75.00%), Query Frame = 1
Query: 10 FEDLPEGFHNDVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSLPPGDIFVQVSAGDRHTCGIKIDQTVACWG 249
F+ L EGF+ D+D +AG HTCALE RP V+FGG VRCWG N+ GQ+ PP +F+QVS+G TCGI++D+TVACWG
Sbjct: 34 FDRLEEGFYADLDGTAASAGFFHTCALEMRPSVEFGGVVRCWGFNEHGQASPPPGVFIQVSSGHLFTCGIRMDETVACWG 113
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Match: A0A067D4P3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D4P3_SAPPC) HSP 1 Score: 95.5 bits (236), Expect = 4.430e-21 Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = 1
Query: 34 HNDVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSLPPGDIFVQVSAGDRHTCGIKIDQTVACWG 249
H D+D T++AG HTCA+ DFGG V CWG + GQ+ PP F+QVS+G HTCG+K+D+TVACWG
Sbjct: 27 HVDIDDTTVSAGISHTCAIHSVSAADFGGKVLCWGDDSMGQASPPDAEFIQVSSGRFHTCGVKLDETVACWG 98
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Match: A0A1V9YN74_9STRA (Uncharacterized protein n=2 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YN74_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.810e-19 Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 34 HNDVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSLPPGDIFVQVSAGDRHTCGIKIDQTVACWG 249
H D+D T++AG HTCA+ DFGG V CWG + GQS PP F+QVS G H+CG+K+D+TV CWG
Sbjct: 53 HLDIDDTTVSAGIGHTCAIHSVSAADFGGKVLCWGEDMLGQSSPPDAEFIQVSCGRFHSCGVKLDETVECWG 124
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Match: A0A225VBP5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VBP5_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 7.360e-19 Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 1
Query: 40 DVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSLPPGDIFVQVSAGDRHTCGIKIDQTVACWG 249
D+D +IAAG H+CA+ + D GG V CWG N+ GQS PP F+QVS G H+CGI+ID+T+ CWG
Sbjct: 31 DIDETSIAAGIEHSCAIHTQSYEDVGGRVVCWGVNNGGQSTPPPGDFIQVSTGRLHSCGIRIDETLECWG 100
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Match: A0A1W0A4G8_9STRA (Uncharacterized protein n=2 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A4G8_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 9.450e-19 Identity = 38/79 (48.10%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 13 EDLPEGFHNDVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSLPPGDIFVQVSAGDRHTCGIKIDQTVACWG 249
ED+ E H D+D T++AG H+CA+ DFGG V CWG N GQ+ P F+QVS+G H+CG+K+D+T+ CWG
Sbjct: 23 EDVIE--HVDIDDTTVSAGIEHSCAIHSVSAADFGGKVICWGSNSMGQAEAPDAEFIQVSSGRFHSCGVKLDETIECWG 99
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Match: H3GQG3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQG3_PHYRM) HSP 1 Score: 87.4 bits (215), Expect = 1.700e-18 Identity = 37/70 (52.86%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 40 DVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSLPPGDIFVQVSAGDRHTCGIKIDQTVACWG 249
D+D +IAAG H+CA++ + D GG V CWG N+ GQS PP F+QVS G H+CGI+ID+T+ CWG
Sbjct: 35 DIDETSIAAGIEHSCAIQTQSYEDVGGRVVCWGVNNGGQSSPPPGDFIQVSTGRLHSCGIRIDETLECWG 104
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Match: A0A3R7FVX9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7FVX9_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.990e-18 Identity = 37/70 (52.86%), Postives = 48/70 (68.57%), Query Frame = 1
Query: 40 DVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSLPPGDIFVQVSAGDRHTCGIKIDQTVACWG 249
D+D TIAAG H+CA++ + D GG V CWG N GQS PP F+QVS G H+CGI++D+T+ CWG
Sbjct: 35 DIDETTIAAGIEHSCAIQTQSYEDVGGRVVCWGVNHGGQSSPPPGEFIQVSTGRLHSCGIRVDETIECWG 104
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Match: A0A0P1B0Z2_PLAHL (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B0Z2_PLAHL) HSP 1 Score: 87.8 bits (216), Expect = 3.870e-18 Identity = 38/70 (54.29%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 40 DVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWGQSLPPGDIFVQVSAGDRHTCGIKIDQTVACWG 249
D+D +IAAG H+CA+ + D GG V CWG N+ GQS PP F+QVS+G H+CGI+ID+TV CWG
Sbjct: 35 DIDETSIAAGIEHSCAIYTQSYDDVGGRVVCWGVNNGGQSSPPAGKFIQVSSGRLHSCGIRIDETVECWG 104 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93666.16798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig93666.16798.1 >prot_H-elongata_contig93666.16798.1 ID=prot_H-elongata_contig93666.16798.1|Name=mRNA_H-elongata_contig93666.16798.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=136bp EKVFEDLPEGFHNDVDSITIAAGGHHTCALEYRPGVDFGGPVRCWGRNDWback to top mRNA from alignment at H-elongata_contig93666:1677..2468+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig93666.16798.1 ID=mRNA_H-elongata_contig93666.16798.1|Name=mRNA_H-elongata_contig93666.16798.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=792bp|location=Sequence derived from alignment at H-elongata_contig93666:1677..2468+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig93666:1677..2468+ >mRNA_H-elongata_contig93666.16798.1 ID=mRNA_H-elongata_contig93666.16798.1|Name=mRNA_H-elongata_contig93666.16798.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=816bp|location=Sequence derived from alignment at H-elongata_contig93666:1677..2468+ (Himanthalia elongata Himel1 dioecious)back to top |