mRNA_H-elongata_contig936.16792.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Match: D8LNX2_ECTSI (Protein phosphatase 2C containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX2_ECTSI) HSP 1 Score: 442 bits (1136), Expect = 3.880e-155 Identity = 211/265 (79.62%), Postives = 239/265 (90.19%), Query Frame = 1
Query: 1 MEEKLGGSGGARLFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIVRLRDDLRSCPVDCSSSGATCVLVTIRGKKICIANLGDSKCVLGRLVNGQICSVPLSEDHKPDRPDEKQRILDLGGQVGSRQLVVGSSPSGPIRIPMGPARVWYRCRGEVMGLAMSRSLGDDIAHQAGVSSEPEIMEHDIDASDQFLILATDGVWDVMDIAQAAQIVQGYASRCQGNAWDPQGAAALLSHTARKRWEGLSAIIDDITAMVVRLNI 795
M+E LGG G RLFVVLDGHGE+GHLVSRRC+ +LP +VV+S V RA +R+ DDLRSCPVDC+SSGATCVL TIR KI +ANLGDSKCVL RLVNGQ+C+VPLS DHKPDRPDE+QRIL +GGQVGSR LVVGS+PSGPIRIPMGPARVWYRCRGE+MGLAMSRSLGDDIAHQAGVSSEPE+ EH IDA+DQFLILATDGVWDV +I QA QIVQGYASRC+GN+WDPQGAA+LL+H+ARKRWEGLSA++DDITA+VVRL +
Sbjct: 18 MKEDLGGLG-VRLFVVLDGHGELGHLVSRRCSAKLPNLVVDSNLCVARATLRMADDLRSCPVDCASSGATCVLTTIRDGKISVANLGDSKCVLARLVNGQVCAVPLSHDHKPDRPDERQRILAIGGQVGSRHLVVGSNPSGPIRIPMGPARVWYRCRGEIMGLAMSRSLGDDIAHQAGVSSEPEVKEHQIDANDQFLILATDGVWDVTEIGQAVQIVQGYASRCRGNSWDPQGAASLLAHSARKRWEGLSAVVDDITALVVRLTV 281
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Match: A0A835YTT3_9STRA (Phosphatase 2C-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT3_9STRA) HSP 1 Score: 309 bits (791), Expect = 1.290e-101 Identity = 166/289 (57.44%), Postives = 199/289 (68.86%), Query Frame = 1
Query: 1 MEEKL---GGSGGARLFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIVRLRDDLRS-CPVDCSSSGATCVLVTIRGK-KICIANLGDSKCVLGRLVNG-------------------QICSVPLSEDHKPDRPDEKQRILDLGGQVGSRQLVVGSSPSGPIRIPMGPARVWYRCRGEVMGLAMSRSLGDDIAHQAGVSSEPEIMEH--DIDASDQFLILATDGVWDVMDIAQAAQIVQGYASRCQGNAWDPQGAAALLSHTARKRWEGLSAIIDDITAMVVRL 789
MEE L GG R+F VLDGHGE GHLV+RRC ERLP+++ + RA V L +DL S VDC SGATCV+VTI + + +ANLGDS+CVLGR G Q+C+VPL+ DHKPDRPDE+ RI GGQVGSRQL+VGS P+GPIRIPMGPARVWY+ RGE MGLAMSRS+GD IAH AGVS++PE++EH D DA D FL+LA+DGVWDV+D A IV A+ G WDP+ AA ARKRW+GLS +IDDITA+VV+L
Sbjct: 67 MEEALDIDGGGDRLRVFAVLDGHGEAGHLVTRRCRERLPQLLRAARGDAARACVALHEDLASGVHVDCQCSGATCVVVTISARGAVTVANLGDSRCVLGRWECGGXXXXXXXXXXXMVGRAQRQVCAVPLTTDHKPDRPDERARIQAAGGQVGSRQLIVGSGPAGPIRIPMGPARVWYQVRGETMGLAMSRSIGDVIAHAAGVSAQPEVVEHCLDRDAGDAFLVLASDGVWDVLDAQAAVHIVAACAAAAGGAEWDPREAAXXXXXAARKRWDGLSPMIDDITALVVKL 355
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Match: A0A7S4D964_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D964_HETAK) HSP 1 Score: 295 bits (755), Expect = 8.540e-97 Identity = 140/253 (55.34%), Postives = 188/253 (74.31%), Query Frame = 1
Query: 37 LFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIVRLRDDL-RSCPVDCSSSGATCVLVTIRGKKICIANLGDSKCVLGRLVNGQICSVPLSEDHKPDRPDEKQRILDLGGQVGSRQLVVGSSPSGPIRIPMGPARVWYRCRGEVMGLAMSRSLGDDIAHQAGVSSEPEIMEHDIDASDQFLILATDGVWDVMDIAQAAQIVQGYASRCQGNAWDPQGAAALLSHTARKRWEGLSAIIDDITAMVVRLN 792
+F VLDGHG+ GHLVS +C ERLP++ E+G + R + ++ +L +S +D SGATCV+ + G+++ + NLGDSK VLGR VNG PL+ DHKPDRPDE+QRIL GG+VG RQLVVG+ P+GP+R+PMGP R+WY+ RGE MGLAMSRSLGD I H GVS++PE+ EH +D D FL+L +DG+WDV D+ QA QIVQG ++ + WDP+ AA L+ +AR+RWE +S ++DDITA+VV+L
Sbjct: 59 MFCVLDGHGQQGHLVSTQCRERLPQLYRETGNDLSRTCLAMQAELEKSTAMDVKCSGATCVICVVEGRRLTVGNLGDSKAVLGRRVNGVTLPHPLTNDHKPDRPDERQRILQAGGKVGCRQLVVGNGPNGPVRLPMGPMRIWYQVRGETMGLAMSRSLGDGIVHALGVSADPELTEHLLDGEDLFLLLGSDGIWDVTDLNQAVQIVQGVVNK-NPHGWDPREAAEELAVSARRRWESMSQMVDDITAIVVKLQ 310
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Match: A0A7S2WTT9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTT9_9STRA) HSP 1 Score: 281 bits (720), Expect = 8.110e-90 Identity = 141/265 (53.21%), Postives = 183/265 (69.06%), Query Frame = 1
Query: 7 EKLGGSGGARLFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIVRLRDDLRSCPVDCSSSGATCVLVTIRGKKICIANLGDSKCVLGRLVNGQICSVPLSEDHKPDRPDEKQRILDLGGQVGSRQLVVGSSPSGPIRIPMGPARVWYRCRGEVMGLAMSRSLGDDIAHQAGVSSEPEIMEHDIDASDQFLILATDGVWDVMDIAQAAQIVQGYASRCQGNA---WDPQGAAALLSHTARKRWEGLSAIIDDITAMVVRLN 792
E GG + V DGHGE GHLVSR ERL K+ +E RA +++ +L VD SGATCV+V +RG I + N GDS+ VLGR NG I ++ L+ DHKPDRPDE++R++ GGQVGSRQLVVG + +GP+ +P+GP RVWY+ RGE MGLAMSRSLGD IAH GVSSEPE+ EH + ++D F+ILA+DG+WDV++ QA QIV + +R + WD AA +L+ TAR+RWE LS ++DDITA+VV L
Sbjct: 168 EHSGGESDLHAWGVFDGHGEFGHLVSRIIRERLGKIWLECSQNFSRAFWQMQSELDKSSVDARCSGATCVMVVLRGNTIQVGNCGDSRAVLGRRSNGTISALQLTSDHKPDRPDERRRVMQAGGQVGSRQLVVGHNANGPVTLPLGPPRVWYQIRGETMGLAMSRSLGDGIAHSNGVSSEPEVTEHAVSSTDVFVILASDGIWDVIETNQAVQIVGNHFARATASGSTQWDVVDAAMVLTTTARRRWESLSPMVDDITAVVVDLR 432
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Match: A0A7S3ZZR6_9STRA (Hypothetical protein n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZZR6_9STRA) HSP 1 Score: 268 bits (684), Expect = 2.190e-84 Identity = 139/256 (54.30%), Postives = 177/256 (69.14%), Query Frame = 1
Query: 34 RLFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIVRLRDDLRSCPVDCSSSGATCVLVTIRGKKICIANLGDSKCVLGRLVNGQICSVPLSEDHKPDRPDEKQRILDLGGQVGSRQLVVGSSPSGPIRIPMGPARVWYR---CRGEVMGLAMSRSLGDDIAHQAGVSSEPEIMEHDIDASDQFLILATDGVWDVMDIAQAAQIVQGYASRCQGNAWDPQGAAALLSHTARKRWEGLSAIIDDITAMVVRLN 792
R + VLDGHGEIGHLVS+RC+++L + V+S + A +++DL C +D SGATCV V + + +AN+GDS+ VLG L IC+ PL+ DHKPDR DE+ RI+ GGQV RQLVVG S +GPI +P+GP RVWYR G+ MGLAMSRS GD IAH GVS EPEI ++++D +D+FLI ATDGVWDV+D AQA +IV R N WDP AA L +AR RW+ LS +IDDITA+VV L+
Sbjct: 158 RCYGVLDGHGEIGHLVSKRCSQQLCEHFVKSQLDMSLAFRLMQEDLSQCELDIKCSGATCVFVHLHDSYLRVANIGDSRGVLGHLDGANICATPLTSDHKPDRHDEQIRIVACGGQVSCRQLVVGHSSNGPITLPLGPPRVWYRRNSSHGDTMGLAMSRSFGDAIAHGLGVSCEPEITQYNLDLADKFLICATDGVWDVIDNAQAVKIVHTLYER--SNDWDPLEAAHTLCISARNRWQSLSPMIDDITALVVDLH 411
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Match: A0A7S1U9X7_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9X7_9STRA) HSP 1 Score: 263 bits (672), Expect = 9.320e-81 Identity = 137/284 (48.24%), Postives = 181/284 (63.73%), Query Frame = 1
Query: 37 LFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIVRLRDDLRSCPVDCSSSGATCVLVTI----RGK----KICIANLGDSKCVLGRLVNGQICSVPLSEDHKPDRPDEKQRILDLGGQVGSRQLVVGSSPSGPIRIPMGPARVWYRCRGEVMGLAMSRSLGDDIAHQAGVSSEPEIMEHDIDASDQFLILATDGVWDVMDIAQAAQIV------------------------QGYASR-CQGNAWDPQGAAALLSHTARKRWEGLSAIIDDITAMVVRL 789
LF V DGHGE GHLVSR+C E +P+ ++ + +G A +D +SC VDCS SGAT V++ I RG+ + I N GDS+ V+ R+VN I V L++DHKPDRPDE++RI +GG+VG+RQ+VVG P+G I +P+GPAR+WY CRGE MGLAMSRSLGD IAH+ G S EPE+ ++ D FL+LATDGVWDV+D A I G++S + WDP+ AA + TAR+RWE LSA++DDIT +VV+L
Sbjct: 316 LFAVFDGHGEFGHLVSRKCREEMPQRLISNRLDMGAAFDEAQDHFKSCEVDCSCSGATAVVIIIDNATRGRGGSSTLRIGNCGDSRAVVARVVNNTITGVTLTKDHKPDRPDERRRITAMGGKVGTRQVVVGHGPNGAITMPVGPARIWYNCRGETMGLAMSRSLGDLIAHRVGGSHEPEMTMRNLQEEDMFLLLATDGVWDVLDANAAVDIAFEVMMEAREEAGLGPKRVPMGGAAAGFSSEEWRSIPWDPEVAAKRICTTARRRWENLSAMVDDITCVVVKL 599
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Match: A0A482S1K4_9ARCH (Protein serine/threonine phosphatase 2C family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1K4_9ARCH) HSP 1 Score: 257 bits (656), Expect = 3.540e-80 Identity = 125/254 (49.21%), Postives = 172/254 (67.72%), Query Frame = 1
Query: 34 RLFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIVRLRDDLRSCPVDCSSSGATCVLVTIRGKKICIANLGDSKCVLGRL-VNGQICSVPLSEDHKPDRPDEKQRILDLGGQVGSRQLVVGSSPSGPIRIPMGPARVWYRCRGEVMGLAMSRSLGDDIAHQAGVSSEPEIMEHDIDASDQFLILATDGVWDVMDIAQAAQIVQGYASRCQGNAWDPQGAAALLSHTARKRWEGLSAIIDDITAMVVRLN 792
R++ VLDGHGE GH+VS+RC E P + + + V A +++DL S +D SGATCV+ + ++ + N GDS+ VLGR +G I + PLS DHKPD+P+E++RIL GG +G RQ++V GP+ +P+GP RVWY+ RGE +GLAMSRSLGD I H+ GV++EPE+ EH ID D+F+ILATDGVWDV+D A Q+V G ASR W A+ + AR RWE LS ++DDIT +VV+++
Sbjct: 184 RVYCVLDGHGEHGHIVSKRCRENFPHFLKSTNWQVEAAFNMMQNDLTSSEIDVRCSGATCVIACVSNNRLTVYNCGDSRAVLGRRSASGAIAAYPLSNDHKPDKPEERKRILGCGGHLGCRQVLVNQGNRGPVSMPVGPCRVWYQHRGETLGLAMSRSLGDSIVHKVGVTAEPELTEHQIDDHDEFIILATDGVWDVVDNNHAVQMVFGVASRSVN--WSVLEASNAVCRFARSRWEKLSPMVDDITCVVVKIH 435
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Match: A0A7S2CMF9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMF9_9STRA) HSP 1 Score: 245 bits (626), Expect = 2.380e-75 Identity = 120/268 (44.78%), Postives = 179/268 (66.79%), Query Frame = 1
Query: 1 MEEKLGGSGGARLFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIVRLRDDLRSCPVDCSSSGATCVLVTIRGKKICIANLGDSKCVLGRLVNG--QICSVPLSEDHKPDRPDEKQRILDLGGQVGSRQLVVGSSPSGPIRIPMGPARVWYRCRGEVMGLAMSRSLGDDIAHQAGVSSEPEIMEHDIDASDQFLILATDGVWDVMDIAQAAQIVQGYASRC--QGNAWDPQGAAALLSHTARKRWEGLSAIIDDITAMVVRLN 792
+ EK+ G ++V DGHG+ GHLVS+ E++ K +++ F + + ++ L VD SSG+TCV+V + + +AN GDS+ VLG++VN Q+ ++ L++DHKPDRPDE+ R+ GGQVG RQ+++ S +R+P+GPARVWY RGE GLAMSRSLGD I H GVS EPE+ + +D +++F+I+ATDG+WDV+ + QIV + + + W+PQ AA +L TAR+RWEG+S ++DDITA+V+ L+
Sbjct: 189 LMEKVQGESHRHTWIVFDGHGDRGHLVSKFGREKMGKTWIDNKFRLRETFLSMQQQLNKSSVDVRSSGSTCVMVVLDNDCLKVANCGDSRAVLGKVVNSSSQLATIVLTDDHKPDRPDERMRVEKAGGQVGCRQMLMNRGSS--VRVPLGPARVWYTNRGETTGLAMSRSLGDAIVHTFGVSEEPEVTQRTLDKTERFIIVATDGIWDVLHSSHVVQIVDKHFNEAARSNSPWNPQDAAMVLCLTARRRWEGMSTMVDDITAVVIDLS 454
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Match: A0A7S2XVV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVV9_9STRA) HSP 1 Score: 229 bits (583), Expect = 5.270e-71 Identity = 110/191 (57.59%), Postives = 139/191 (72.77%), Query Frame = 1
Query: 1 MEEKLGGSGGARLFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIVRLRDDLRSCP-VDCSSSGATCVLVTIRGKKICIANLGDSKCVLGRLVNGQICSVPLSEDHKPDRPDEKQRILDLGGQVGSRQLVVGSSPSGPIRIPMGPARVWYRCRGEVMGLAMSRSLGDDIAHQAGVSSEPEIMEHDI 570
+EE+ GGSG + VLDGHG+ GHLVS E L + E G V RA +R+++DL + P +D SGATCV+ +RG+ + + NLGDS+CVL R VNG + V LS DHKPDRPDE+QRIL GG+VG RQLVVG+ PSGP+R+PMGP R+WY+ RGE MGLAMSRSLGD I H GVS++PE+ EH +
Sbjct: 103 LEERCGGSGDEGFYCVLDGHGQQGHLVSGYIRENLVRHYSECGQDVSRACLRMQEDLDTTPTLDTKCSGATCVIAILRGRSLLVGNLGDSRCVLARRVNGVLSPVALSNDHKPDRPDERQRILAAGGKVGCRQLVVGNGPSGPVRLPMGPMRIWYQVRGETMGLAMSRSLGDSIVHTQGVSADPELKEHQV 293
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Match: A0A7S2NWU1_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2NWU1_9STRA) HSP 1 Score: 193 bits (491), Expect = 3.340e-56 Identity = 102/259 (39.38%), Postives = 155/259 (59.85%), Query Frame = 1
Query: 25 GGARLFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIVRLRDDLRSCPVDCSSSGATCVLVTIR-GKKICIANLGDSKCV-LGRLVNGQICSVPLSEDHKPDRPDEKQRILDLGGQVGSRQLVVGSSPSGPIRIPMGPARVWYRCRGEVMGLAMSRSLGDDIAHQAGVSSEPEIMEHDIDASDQFLILATDGVWDVMDIAQAAQIVQGYASRCQGNAWDPQGAAALLSHTARKRWEGLSAI-IDDITAMVVRLN 792
G +++V DGHG GH+VS+ C LPK++ E+G+ RAI L+ DL S +D SG TCV ++ + I + N+GDS+ + L R N + ++PLS DHKP + DE++RIL+ GG++ S+ G P+RVW+ MGLAMSRS+GD+ AH+ GVS EP+I H I+ D ++LA+DG+WDV + A ++Q + + W+ + AA L+ AR RWE +S IDD+T +V+++
Sbjct: 119 GSPSVYMVFDGHGRFGHVVSKHCKAVLPKILAETGYDQERAISVLQSDLESSAIDIECSGCTCVTAIVKQNRTIEVGNVGDSRAIILQRSPNNTLKALPLSIDHKPSQLDERKRILETGGRIASKHCSAG------------PSRVWFEYNNTTMGLAMSRSVGDEFAHRVGVSHEPQIFHHKIEPQDTCIVLASDGLWDVYSNDEVAHLIQTCINGNYAD-WNAKIAAVFLTKMARMRWEHISTEHIDDVTCLVIKIE 364 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig936.16792.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig936.16792.1 >prot_H-elongata_contig936.16792.1 ID=prot_H-elongata_contig936.16792.1|Name=mRNA_H-elongata_contig936.16792.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=265bp MEEKLGGSGGARLFVVLDGHGEIGHLVSRRCAERLPKMVVESGFGVGRAIback to top mRNA from alignment at H-elongata_contig936:4328..8538- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig936.16792.1 ID=mRNA_H-elongata_contig936.16792.1|Name=mRNA_H-elongata_contig936.16792.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4211bp|location=Sequence derived from alignment at H-elongata_contig936:4328..8538- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig936:4328..8538- >mRNA_H-elongata_contig936.16792.1 ID=mRNA_H-elongata_contig936.16792.1|Name=mRNA_H-elongata_contig936.16792.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1590bp|location=Sequence derived from alignment at H-elongata_contig936:4328..8538- (Himanthalia elongata Himel1 dioecious)back to top |