mRNA_H-elongata_contig93129.16763.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Match: E2BS40_HARSA (Zinc finger BED domain-containing protein 1 (Fragment) n=2 Tax=Harpegnathos saltator TaxID=610380 RepID=E2BS40_HARSA) HSP 1 Score: 81.6 bits (200), Expect = 1.020e-18 Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 1
Query: 73 LKWWLAHRNKYPTLYSVACVYLAVPATSGSSERVFSSVGNIVTKKRNRLSTENVNNLVFLH 255
LKWW AH N YP + ++ VYLA+ A+S SSERVFS+ GNIVT KRN LSTENVN L+FL+
Sbjct: 3 LKWWKAHENLYPMIAALTKVYLAILASSASSERVFSTAGNIVTAKRNCLSTENVNLLIFLN 63
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Match: A0A1A7ZCN3_NOTFU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A1A7ZCN3_NOTFU) HSP 1 Score: 75.1 bits (183), Expect = 8.190e-16 Identity = 36/65 (55.38%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 61 STNALKWWLAHRNKYPTLYSVACVYLAVPATSGSSERVFSSVGNIVTKKRNRLSTENVNNLVFLH 255
STN L+WW ++ ++P+L S+A YL VPATS SER+FSS GNIV+KKR LS E+++ L F H
Sbjct: 30 STNPLQWWKSNEARFPSLASLAKSYLCVPATSTPSERLFSSAGNIVSKKRTSLSPEHIDMLTFFH 94
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Match: UPI001894F835 (E3 SUMO-protein ligase ZBED1-like n=2 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI001894F835) HSP 1 Score: 80.1 bits (196), Expect = 8.790e-16 Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 22 RFDAEQSIKDTRSSTNALKWWLAHRNKYPTLYSVACVYLAVPATSGSSERVFSSVGNIVTKKRNRLSTENVNNLVFL 252
+F+A S + +++ALKWW H +K+P L +A Y+ +PA+S SSERVFSS GNI+T KR+ L ENV++LVFL
Sbjct: 313 QFEAYLSEPEIGHNSDALKWWKDHESKFPRLAELAKKYMCIPASSASSERVFSSAGNIITAKRSSLLPENVSSLVFL 389
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Match: UPI0018935EA0 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI0018935EA0) HSP 1 Score: 80.1 bits (196), Expect = 1.100e-15 Identity = 39/78 (50.00%), Postives = 55/78 (70.51%), Query Frame = 1
Query: 22 RFDAEQSIKDTRSSTNALKWWLAHRNKYPTLYSVACVYLAVPATSGSSERVFSSVGNIVTKKRNRLSTENVNNLVFLH 255
+F+A S +++ALKWW H +K+P L +A Y+ +PA+S SSERVFSS GNI+T KR+ L ENV++LVFL+
Sbjct: 412 QFEAYLSEPQIGHNSDALKWWKDHESKFPRLAELAKKYMCIPASSASSERVFSSAGNIITAKRSSLLPENVSSLVFLY 489
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Match: A0A2S2P4C5_SCHGA (Zinc finger BED domain-containing protein 1 (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2P4C5_SCHGA) HSP 1 Score: 74.7 bits (182), Expect = 1.360e-15 Identity = 36/67 (53.73%), Postives = 47/67 (70.15%), Query Frame = 1
Query: 55 RSSTNALKWWLAHRNKYPTLYSVACVYLAVPATSGSSERVFSSVGNIVTKKRNRLSTENVNNLVFLH 255
R + +WW +H KYP + VA +L++PATS SSER FS+ GN+VT KRN L+ ENVN LVFL+
Sbjct: 32 RYDFDPFEWWKSHEKKYPLVAKVAKKFLSIPATSVSSERCFSTAGNVVTPKRNCLAPENVNMLVFLY 98
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Match: X1XK51_ACYPI (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=X1XK51_ACYPI) HSP 1 Score: 73.9 bits (180), Expect = 1.620e-15 Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 55 RSSTNALKWWLAHRNKYPTLYSVACVYLAVPATSGSSERVFSSVGNIVTKKRNRLSTENVNNLVFLH 255
R N+ +WW NKYP L +A YLA+PATS SSER FS+ GNIVT KR L T+++N L+FL+
Sbjct: 19 RFDLNSFEWWKLRENKYPALTELAKQYLAIPATSVSSERCFSTAGNIVTLKRTSLLTKHLNMLIFLY 85
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Match: UPI0005F55F89 (zinc finger BED domain-containing protein 1-like n=1 Tax=Vollenhovia emeryi TaxID=411798 RepID=UPI0005F55F89) HSP 1 Score: 78.2 bits (191), Expect = 1.750e-15 Identity = 41/79 (51.90%), Postives = 52/79 (65.82%), Query Frame = 1
Query: 19 SRFDAEQSIKDTRSSTNALKWWLAHRNKYPTLYSVACVYLAVPATSGSSERVFSSVGNIVTKKRNRLSTENVNNLVFLH 255
S+F A S R + L+WW +K+P L +A YL++PATS S+ER FS+ GNIVT KRN LS ENVN LVFL+
Sbjct: 191 SQFQAYLSEPQLRVDLDYLEWWKTRADKFPALAILARKYLSIPATSASAERTFSTAGNIVTPKRNCLSPENVNMLVFLY 269
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Match: UPI001113C14C (zinc finger BED domain-containing protein 1-like n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=UPI001113C14C) HSP 1 Score: 74.3 bits (181), Expect = 2.680e-15 Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 1
Query: 55 RSSTNALKWWLAHRNKYPTLYSVACVYLAVPATSGSSERVFSSVGNIVTKKRNRLSTENVNNLVFLH 255
R + +WW +H KYP + + YL++PATS SSER FS+ GN+VT KRN L+ ENVN LVFL+
Sbjct: 49 RYDFDPFEWWKSHEKKYPLIAELVKKYLSIPATSVSSERCFSTAGNVVTSKRNCLAPENVNMLVFLY 115
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Match: UPI000B9375E9 (zinc finger BED domain-containing protein 1-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B9375E9) HSP 1 Score: 76.3 bits (186), Expect = 3.260e-15 Identity = 41/81 (50.62%), Postives = 51/81 (62.96%), Query Frame = 1
Query: 13 QLSRFDAEQSIKDTRSSTNALKWWLAHRNKYPTLYSVACVYLAVPATSGSSERVFSSVGNIVTKKRNRLSTENVNNLVFLH 255
Q + AE + R NA +WW NKYP L +A +LA+PATS SSER FS+ GNIVT KR L T+NVN L+FL+
Sbjct: 122 QFQNYIAEPQL---RFDLNAFEWWKFRENKYPALAELAKQHLAIPATSVSSERCFSTAGNIVTSKRTCLLTKNVNMLIFLY 199
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Match: UPI000DC12F9E (zinc finger BED domain-containing protein 1-like n=1 Tax=Melanaphis sacchari TaxID=742174 RepID=UPI000DC12F9E) HSP 1 Score: 73.6 bits (179), Expect = 5.930e-15 Identity = 34/63 (53.97%), Postives = 47/63 (74.60%), Query Frame = 1
Query: 67 NALKWWLAHRNKYPTLYSVACVYLAVPATSGSSERVFSSVGNIVTKKRNRLSTENVNNLVFLH 255
+AL+WW H +KYP + ++A YL +PATS SSER FS+ GNIV+ KR+ L+ E VN L+FL+
Sbjct: 54 DALEWWKTHTSKYPLIVALAMKYLGIPATSVSSERCFSTAGNIVSAKRSCLAPETVNMLIFLY 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig93129.16763.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig93129.16763.1 >prot_H-elongata_contig93129.16763.1 ID=prot_H-elongata_contig93129.16763.1|Name=mRNA_H-elongata_contig93129.16763.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=85bp MAEFQLSRFDAEQSIKDTRSSTNALKWWLAHRNKYPTLYSVACVYLAVPAback to top mRNA from alignment at H-elongata_contig93129:1053..1307- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig93129.16763.1 ID=mRNA_H-elongata_contig93129.16763.1|Name=mRNA_H-elongata_contig93129.16763.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=255bp|location=Sequence derived from alignment at H-elongata_contig93129:1053..1307- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig93129:1053..1307- >mRNA_H-elongata_contig93129.16763.1 ID=mRNA_H-elongata_contig93129.16763.1|Name=mRNA_H-elongata_contig93129.16763.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=510bp|location=Sequence derived from alignment at H-elongata_contig93129:1053..1307- (Himanthalia elongata Himel1 dioecious)back to top |