mRNA_H-elongata_contig9308.16759.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Match: D7G0X3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0X3_ECTSI) HSP 1 Score: 169 bits (429), Expect = 2.920e-51 Identity = 91/151 (60.26%), Postives = 109/151 (72.19%), Query Frame = 1
Query: 1 MAEH--SDPFSTRGLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYSPTEDDLXXXXXXXXXXXXXXXXFDEFVMVIRLGNMETDFEKEIKGAFKFFDKNNDGLVDPAELANIMRGLGESLSDGEIALLISTADQDKDGNISMKE 447
MA+H D + RGLSEE+VADLKEAFDNFDR+ DG+ID EL+TVLRSLGYSPT+D L F+EFV+++R+G METD+EKEI GAF FFDKN DG VD ELA I R LG+SL+D EI LLI+ A +D+D ISMKE
Sbjct: 1 MAKHVNEDSVAIRGLSEEDVADLKEAFDNFDRNGDGTIDSVELATVLRSLGYSPTKDQLKKLMDKVDLDGTGDISFEEFVVLMRVGGMETDYEKEINGAFSFFDKNGDGQVDRQELAEIARALGDSLTDAEIYLLINAAHKDRDATISMKE 151
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Match: D8LJU6_ECTSI (Yellow cameleon 2.60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU6_ECTSI) HSP 1 Score: 139 bits (351), Expect = 1.480e-39 Identity = 76/141 (53.90%), Postives = 91/141 (64.54%), Query Frame = 1
Query: 25 STRGLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYSPTEDDLXXXXXXXXXXXXXXXXFDEFVMVIRLGNMETDFEKEIKGAFKFFDKNNDGLVDPAELANIMRGLGESLSDGEIALLISTADQDKDGNISMKE 447
+T+ LSEEE+ D KEAF NFD+D +G+ID EL V+RSLGYSPT L FDEFV +++LG +ETDF KEI AFKFFDK+ DG V PAELA IMRGLG+ LSD EI LL+ A IS+ E
Sbjct: 7 TTKELSEEEIEDYKEAFSNFDKDGNGNIDELELGVVMRSLGYSPTNQQLKEMMAKVDTDQSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPAELAEIMRGLGDKLSDDEIELLVKVAXXXXXXVISIDE 147
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Match: A0A6H5JMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF0_9PHAE) HSP 1 Score: 133 bits (334), Expect = 2.760e-36 Identity = 72/141 (51.06%), Postives = 92/141 (65.25%), Query Frame = 1
Query: 25 STRGLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYSPTEDDLXXXXXXXXXXXXXXXXFDEFVMVIRLGNMETDFEKEIKGAFKFFDKNNDGLVDPAELANIMRGLGESLSDGEIALLISTADQDKDGNISMKE 447
+T+ LSEEE+ D KEAF NFD+D G+ID +EL V+RSLGYSPT + L F+EFV +++LG +ETDF+KEI AFKFFDK+ DG V AELA IMRGLG++L+D EI LL+ IS+ E
Sbjct: 70 TTKELSEEEIEDYKEAFSNFDKDCSGNIDESELGVVMRSLGYSPTNEQLKEIMAKVDTDGNGGISFEEFVAMMQLGEVETDFKKEINEAFKFFDKDGDGEVTRAELAEIMRGLGDTLTDDEIDLLVKVXXXXXXXVISIDE 210
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Match: D8LH46_ECTSI (Calmodulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH46_ECTSI) HSP 1 Score: 120 bits (302), Expect = 3.990e-32 Identity = 64/139 (46.04%), Postives = 84/139 (60.43%), Query Frame = 1
Query: 31 RGLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYSPTEDDLXXXXXXXXXXXXXXXXFDEFVMVIRLGNMETDFEKEIKGAFKFFDKNNDGLVDPAELANIMRGLGESLSDGEIALLISTADQDKDGNISMKE 447
+ L+ EEV DLKE F FD+D G ID+ EL TV+ SLGYSPT L F EFV ++R ++TDF+++I+ AFKFFD++ G +D EL NIMR LG L+D EI LL+ AD D DG + + E
Sbjct: 10 KDLTGEEVEDLKETFRTFDKDGSGEIDLDELRTVMTSLGYSPTNKQLEDMMAKVDLDGNGLINFAEFVTMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGNIMRQLGAKLTDSEINLLVQEADVDGDGQVDINE 148
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Match: A0A835YUT0_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT0_9STRA) HSP 1 Score: 118 bits (295), Expect = 4.560e-31 Identity = 61/124 (49.19%), Postives = 82/124 (66.13%), Query Frame = 1
Query: 31 RGLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYSPTEDDLXXXXXXXXXXXXXXXXFDEFVMVIRLGNMETDFEKEIKGAFKFFDKNNDGLVDPAELANIMRGLGESLSDGEIALLI 402
R +EEE+ D +EAF+NFD+D+ G ID EL TV+RSLGY+PT++ L FDEFV+++R +ETDF++EI AFK FDK+ G +D EL IM+GLG +LSD EI LL+
Sbjct: 10 REATEEELEDYREAFNNFDKDQSGEIDEYELGTVMRSLGYNPTDEQLHDMMLKVDIDGNGSISFDEFVIMMRKCEVETDFDREITEAFKVFDKDGSGSIDKEELTAIMKGLGANLSDQEIELLV 133
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Match: UPI00096B1CB1 (calmodulin-beta-like isoform X3 n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B1CB1) HSP 1 Score: 114 bits (284), Expect = 2.610e-29 Identity = 60/138 (43.48%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 34 GLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYSPTEDDLXXXXXXXXXXXXXXXXFDEFVMVIRLGNMETDFEKEIKGAFKFFDKNNDGLVDPAELANIMRGLGESLSDGEIALLISTADQDKDGNISMKE 447
GLSE++VA+ KEAF FD+D+DG I + EL V+RSLG PTE +L F+EF+ ++ E D E+E+K AF+ FDKNNDGL+ EL ++M LGE L++ E+ +I AD D DG ++ +E
Sbjct: 17 GLSEDQVAEFKEAFMLFDKDEDGQITMAELGVVMRSLGQRPTETELRDMLNEVDVDGNGTIEFNEFLQMMSRKMKEADGEEELKEAFRVFDKNNDGLISSTELRHVMTSLGEKLTEEEVDDMIKEADLDGDGQVNYEE 154
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Match: D6WY49_TRICA (Calmodulin n=3 Tax=Cucujiformia TaxID=41088 RepID=D6WY49_TRICA) HSP 1 Score: 112 bits (281), Expect = 1.080e-28 Identity = 60/138 (43.48%), Postives = 86/138 (62.32%), Query Frame = 1
Query: 34 GLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYSPTEDDLXXXXXXXXXXXXXXXXFDEFVMVIRLGNMETDFEKEIKGAFKFFDKNNDGLVDPAELANIMRGLGESLSDGEIALLISTADQDKDGNISMKE 447
GLSE++VA+ KEAF FD+D+DG+I + EL V+RSLG PTE +L F+EF+ ++ + D E+E+K AF+ FDKNNDGL+ EL ++M LGE LS+ E+ +I AD D DG ++ +E
Sbjct: 31 GLSEDQVAEFKEAFMLFDKDEDGTITMAELGVVMRSLGQRPTETELRDMVNEVDQDGNGTIEFNEFLQMMSKKLKDADGEEELKEAFRVFDKNNDGLISSNELRHVMTSLGERLSEEEVDDMIKEADLDGDGQVNYEE 168
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Match: A0A1W7RAW9_9SCOR (Calmodulin n=2 Tax=Scorpiones TaxID=6855 RepID=A0A1W7RAW9_9SCOR) HSP 1 Score: 111 bits (278), Expect = 1.500e-28 Identity = 61/138 (44.20%), Postives = 81/138 (58.70%), Query Frame = 1
Query: 34 GLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYSPTEDDLXXXXXXXXXXXXXXXXFDEFVMVIRLGNMETDFEKEIKGAFKFFDKNNDGLVDPAELANIMRGLGESLSDGEIALLISTADQDKDGNISMKE 447
GL+EE+VA+LKEAF FD+D DG I EL V+RSLG PTE +L FDEF+ ++ +TD E+E+K AF+ FDKN DG + EL ++M LGE L+D E+ +I AD D DG + E
Sbjct: 5 GLTEEQVAELKEAFMLFDKDSDGMITAAELGVVMRSLGQRPTEIELRNMVHIVDQDGNGTIEFDEFLYMMSKKMKDTDSEEELKEAFRVFDKNGDGFISAMELRHVMTNLGEKLTDEEVEDMIKEADLDGDGLVDYDE 142
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Match: A0A8J9XXZ4_BRAAE (Hypothetical protein n=2 Tax=Nitidulidae TaxID=116151 RepID=A0A8J9XXZ4_BRAAE) HSP 1 Score: 112 bits (279), Expect = 2.170e-28 Identity = 59/138 (42.75%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 34 GLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYSPTEDDLXXXXXXXXXXXXXXXXFDEFVMVIRLGNMETDFEKEIKGAFKFFDKNNDGLVDPAELANIMRGLGESLSDGEIALLISTADQDKDGNISMKE 447
GLSE++VA+ KEAF FD+D+DG I + EL V+RSLG PTE +L F+EF+ ++ + D E+E+K AF+ FDKNNDGL+ EL ++M LGE L++ E+ +I AD D DG ++ +E
Sbjct: 31 GLSEDQVAEFKEAFMLFDKDEDGQITMAELGVVMRSLGQRPTETELRDMLNEVDQDGNGTIEFNEFLQMMSKKMKDADGEEELKEAFRVFDKNNDGLISSIELRHVMTSLGERLTEEEVDDMIKEADLDGDGQVNYEE 168
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Match: UPI00096B217D (calmodulin-beta-like isoform X1 n=1 Tax=Aethina tumida TaxID=116153 RepID=UPI00096B217D) HSP 1 Score: 114 bits (284), Expect = 2.380e-28 Identity = 60/138 (43.48%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 34 GLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYSPTEDDLXXXXXXXXXXXXXXXXFDEFVMVIRLGNMETDFEKEIKGAFKFFDKNNDGLVDPAELANIMRGLGESLSDGEIALLISTADQDKDGNISMKE 447
GLSE++VA+ KEAF FD+D+DG I + EL V+RSLG PTE +L F+EF+ ++ E D E+E+K AF+ FDKNNDGL+ EL ++M LGE L++ E+ +I AD D DG ++ +E
Sbjct: 104 GLSEDQVAEFKEAFMLFDKDEDGQITMAELGVVMRSLGQRPTETELRDMLNEVDVDGNGTIEFNEFLQMMSRKMKEADGEEELKEAFRVFDKNNDGLISSTELRHVMTSLGEKLTEEEVDDMIKEADLDGDGQVNYEE 241 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9308.16759.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9308.16759.1 >prot_H-elongata_contig9308.16759.1 ID=prot_H-elongata_contig9308.16759.1|Name=mRNA_H-elongata_contig9308.16759.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=150bp MAEHSDPFSTRGLSEEEVADLKEAFDNFDRDKDGSIDVTELSTVLRSLGYback to top mRNA from alignment at H-elongata_contig9308:2692..3923- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9308.16759.1 ID=mRNA_H-elongata_contig9308.16759.1|Name=mRNA_H-elongata_contig9308.16759.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1232bp|location=Sequence derived from alignment at H-elongata_contig9308:2692..3923- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9308:2692..3923- >mRNA_H-elongata_contig9308.16759.1 ID=mRNA_H-elongata_contig9308.16759.1|Name=mRNA_H-elongata_contig9308.16759.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=900bp|location=Sequence derived from alignment at H-elongata_contig9308:2692..3923- (Himanthalia elongata Himel1 dioecious)back to top |