mRNA_H-elongata_contig9299.16747.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Match: D7G7N2_ECTSI (Fe2OG dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7N2_ECTSI) HSP 1 Score: 346 bits (888), Expect = 9.150e-112 Identity = 232/448 (51.79%), Postives = 261/448 (58.26%), Query Frame = 1
Query: 64 EELLESARLATDEDRLDDAADALRRAAQLSPLDGDVLYRAGVCAINQGRWSRAVRLWREGLMLSPDNSQLKHEAERYRALAFWLD---------SPHDSGAECQDIRPFSHPNPLXXXXXXXXXXXXXXXXXXXDRACGLA--------DSLDVTFMAGPGEWVSETRGPPPLSRSECALVIQEAEETAASSR--------------NGWGTARHYAVPTTDIAVRDLPRTLAWFNTAMRDRIAPLVAAAAALGAG----------------------------EAFGVCAKEDEDEDITGLEE-----------------------------EEEEELGA-----------FVARLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNSGDEYEGGGTWFHGLGRAVRPADPGHVVIFPGGEAVHGGCAITSGIRYILAVFLYEH 1110
E LL++A+ A DEDR DDA +AL RAA+ +P + D+LYRAGVCAINQGRWSRA+RLWR+GL LSPD+ +LK EAE+Y+ALAFWLD + SGA XXXXXXXXXXXXXXXXX D A D+LDV FM G GEWV TR P LS SEC+ ++ EAEE A+ GWGT+RHYAVPTTD+AVR+LPRTLAWFN AMR RI P VA AAALG G A VC+ D DE E E EE G + RLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLN EYEGGGTWF GLG AVRP + GHVV+FPGG VHGG +T G+RYILAVFLYEH
Sbjct: 105 ERLLKAAQQAVDEDRFDDAFEALSRAARAAPDNSDILYRAGVCAINQGRWSRALRLWRDGLALSPDHPELKREAEKYQALAFWLDPGKGDANPDARSSSGALVGAATXXXXXXXXXXXXXXXXXXXXXXXXXQDDGFTATALLPAGEAFDNLDVDFMTGHGEWVCSTRLPL-LSASECSAIVNEAEEKASXXXXXXXXXXXXXXXXXGGWGTSRHYAVPTTDVAVRELPRTLAWFNRAMRTRIGPTVAVAAALGGGVFERPGRRSGSLKRSPPVAEPHAQDEDFPARAVCSAADSDEAAESAEALRASASVEPENGQERRQVESDDDQXXXXXEAEEPRGRPGAPTPXXPALMLRRLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNGTGEYEGGGTWFEGLGSAVRPEEAGHVVVFPGGRTVHGGREVTRGVRYILAVFLYEH 551
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Match: A0A6H5L5S3_9PHAE (Fe2OG dioxygenase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5S3_9PHAE) HSP 1 Score: 281 bits (720), Expect = 4.810e-83 Identity = 190/397 (47.86%), Postives = 215/397 (54.16%), Query Frame = 1
Query: 217 RAVRLWREGLMLSPDNSQLKHEAERYRALAFWLDSPH-DSGAECQD--------------------IRPFSHPNPLXXXXXXXXXXXXXXXXXXXDRACGLA-DSLDVTFMAGPGEWVSETRGPPPLSRSECALVIQEAEETAASSR---------------NGWGTARHYAVPTTDIAVRDLPRTLAWFNTAMRDRIAPLVAAAAALGAG----------------------------EAFGVCAKEDEDE-----------------------DITGLEEEEEEELGA-----------FVARLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNSGDEYEGGGTWFHGLGRAVRPADPGHVVIFPGGEAVHGGCAITSGIRYILAVFLYEH 1110
RA+RLW++GL LSP++ +LK EAE+Y+ALAFWLD D+ + + XXXXXXXXXX G A D+LDV FMAG GEWV TR P +S SEC+ +I EAEE A +GWGT+RHYAVPTTD+AVR+LPRTLAWFN AMR RI P VA AAALG G A VC+ D DE D G E EE G + RLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLN EYEGGGTWF GLGRAVRP + GHVV+FPGG VHGG +T G+RYILAVFLYEH
Sbjct: 593 RALRLWKDGLALSPNHPELKREAEKYQALAFWLDPGEGDANTDARSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDDGFTAPAQLPAGEAFDNLDVDFMAGDGEWVCSTRLPL-ISASECSAIINEAEEKAXXXXXXXXXXXXXXXXXXXSGWGTSRHYAVPTTDVAVRELPRTLAWFNRAMRTRIGPTVAVAAALGGGIFERPGRRSGSLELSPPVAKPHAKDEDFPAHAVCSAADSDEAAAAIALIAPEDGQKGRQVESDDDQEGQSREAEEPRGRAGAPXXXXXALMLRRLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNGTGEYEGGGTWFEGLGRAVRPEEAGHVVVFPGGRTVHGGKEVTRGVRYILAVFLYEH 988
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Match: A0A7S4F157_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F157_CHRCT) HSP 1 Score: 161 bits (408), Expect = 6.170e-42 Identity = 118/353 (33.43%), Postives = 162/353 (45.89%), Query Frame = 1
Query: 73 LESARLATDEDRLDDAADALRRAAQLSPLDGDVLYRAGVCAINQGRWSRAVRLWREGLMLSPDNSQLKHEAERYRALAFWLDSPHDSGAEC-QDIRPFSHPNPLXXXXXXXXXXXXXXXXXXXDRACGLADSLDVTF-----MAGPG---EWVSETRGPPPLSRSECALVIQEAEETAASSRNGWGTARHYAVPTTDIAVRDLPRTLAWFNTAMRDRIAPLVAAAAALGAGEAFGVCAKEDEDEDITGLEEEEEEELGAFVARLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNSGDEYEGGGTWFHGLGRAVRPADPGHVVIFPGGEAVHGGCAITSGIRYILAVFLY 1104
+E A A E R DDA R A ++ DG+ + G ++ G W+ A R WREG +P + L + + A A + D+ Q P + L + + V F G V T P LS+++CA I AEE A + GW TARHYAVPTTD+ V P LAWF MR +AP +++ +GA +RVHDAF+V+Y AAAQ LP+H D+ +LS+T+ LN EY+GGGT+F+ L RAVRP + G ++ F G +HGG I G+RY+LA FLY
Sbjct: 72 MELAATAMVEGRHDDAERFARMALRVDATDGNAWHLRGAALLSSGLWAAAHREWREGRARAPSHELLASQCAKDLAYASASATRQDNEMGLPQAAAPSPPSSQLPSSSLSPSQPSSSSAVAVAETPTAAVVNSSVLFDEAEPCTNDGMRLRIVCSTA--PVLSQAQCASAIAMAEEFA-QTEGGWTTARHYAVPTTDLPVHKCPCLLAWFKELMRSAVAPFLSSNFEVGAD-------------------------------AVRVHDAFIVKYHAAAQARLPMHFDESQLSITLPLNESSEYDGGGTYFYALRRAVRP-EQGQLLAFSG-ALLHGGEPIVRGVRYVLAAFLY 388
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Match: A0A7S4BI62_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BI62_CHRCT) HSP 1 Score: 149 bits (377), Expect = 5.890e-38 Identity = 107/315 (33.97%), Postives = 145/315 (46.03%), Query Frame = 1
Query: 187 VCAINQGRWSRAVRLWREGLMLSPDNSQLKHEAERYRALAFWLDSPHDSGAEC-QDIRPFSHPNPLXXXXXXXXXXXXXXXXXXXDRACGLADSLDVTF-----MAGPG---EWVSETRGPPPLSRSECALVIQEAEETAASSRNGWGTARHYAVPTTDIAVRDLPRTLAWFNTAMRDRIAPLVAAAAALGAGEAFGVCAKEDEDEDITGLEEEEEEELGAFVARLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNSGDEYEGGGTWFHGLGRAVRPADPGHVVIFPGGEAVHGGCAITSGIRYILAVFLY 1104
+CA G W+ A R WREG +P + L + + A A + D+ Q P + L + + V F G V T P LS+++CA I AEE A + GW TARHYAVPTTD+ V P LAWF MR +AP +++ +GA +RVHDAF+V+Y AAAQ LP+H D+ +LS+T+ LN EY+GGGT+F+ L RAVRP + G ++ F G +HGG I G+RY+LA FLY
Sbjct: 52 LCAAPSGLWAAAHREWREGRARAPSHELLASQCAKDLAYASASATRQDNEMGLPQAAAPSPPSSQLPSSSLSPSQPSSSSAVAVAETPTAAVVNSSVLFDEAEPCTNDGMRLRIVCSTA--PVLSQAQCASAIAMAEEFA-QTEGGWTTARHYAVPTTDLPVHKCPCLLAWFKELMRSAVAPFLSSNFEVGAD-------------------------------AVRVHDAFIVKYHAAAQARLPMHFDESQLSITLPLNESSEYDGGGTYFYALRRAVRP-EQGQLLAFSG-ALLHGGEPIVRGVRYVLAAFLY 330
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Match: F0Y9Z7_AURAN (Fe2OG dioxygenase domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y9Z7_AURAN) HSP 1 Score: 153 bits (387), Expect = 2.840e-37 Identity = 126/350 (36.00%), Postives = 164/350 (46.86%), Query Frame = 1
Query: 70 LLESARLATDEDRLDDAADALRRAAQLSPLDGDVLYRAGVCAINQGRWSRAVRLWREGLMLSPDNSQL-KH--EAERYRALAFWLDSPHDSGAECQDIRPFSHPNPLXXXXXXXXXXXXXXXXXXXDRACGLADSLDVTFMAGPGEWVSETRGPPPLSRSECALVIQEAEETAASSRNGWGTARHYAVPTTDIAVRDLPRTLAWFNTAMRDRIAPLVAAAAALGAGEAFGVCAKEDEDEDITGLEEEEEEELGAFVARLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNSGDEYEGGGTWFHGLGRAVRPADPGHVVIFPGGEAVHGGCAITSGIRYILAVFLYEH 1110
L + A A + R +DA A L+P D D LY RWS RL R L L+PD++++ KH +A+ Y A A D + PF L P +V P + + CA I AE A S GW TARH+AVPTTD+ VR++P L WFN A+R I P ALGA + GL+ ARLRV DAF+V+Y AAAQRSLPLH+DQ ++S+T+ LNS +Y+GGGT+FH L +AV D G +V FPG H G AIT G R+++ FLYE+
Sbjct: 612 LRDIAACAQADGRHEDALAAFCALLVLAPRDADALYGRARVTGWMDRWSAERRLMRAALDLAPDDARIRKHVGDADAYHAGAC------DVAGWAKRRVPFE----------------------------ALERPKSDDXXXEPPAYVYAF-DEPVVPAASCADAIAIAEAHA-SHGGGWTTARHFAVPTTDVPVREVPALLKWFNDALRSSIFP------ALGA---------------LYGLDP----------ARLRVIDAFLVKYSAAAQRSLPLHSDQSQISITLPLNSSADYDGGGTYFHDLRQAVN-RDAGGLVAFPG-FLPHAGHAITRGTRFVVVAFLYEY 892
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Match: R1G8J0_EMIHU (Fe2OG dioxygenase domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1G8J0_EMIHU) HSP 1 Score: 153 bits (386), Expect = 3.890e-37 Identity = 118/338 (34.91%), Postives = 154/338 (45.56%), Query Frame = 1
Query: 112 DDAADALRRAAQLSPLDGDVLYRAGVCAINQGRWSRAVRLWREGLMLSPDNSQLKHEAERYRALAFWLDSPHDSGAECQDIRPFSHPNPLXXXXXXXXXXXXXXXXXXXDRACGLADSLDV-----TFMAGPGEWVSETRGPPPLSRSECALVIQEAEETAASSRNGWGTARHYAVPTTDIAVRDLPRTLAWFNTAMRDRIAPLVAAAAALGAGEAFGVCAKEDEDEDITGLEEEEEEELGAFVARLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNSGDEYEGGGTWFHGLGRAVRPADPGHVVIFPGGEAVHGGCAITSGIRYILAVFL-YE 1107
D A A +A +LSP GDV G G + + ++ G+ +P ++ L+ EA+R A AF L +P + D+ P +S+D+ TF P +VS+ P L + C I AE AA S GW TARH++V TTDI + L L FN A+R + P A C E + LRV D F+VRYDA Q SLP HTDQ LS TI+LN EY+GGGTWF GLGRAV GH V+FPG + HGG IT G+RYI+ +F+ YE
Sbjct: 668 DAATSAFAQALRLSPASGDVWNDLGTSLFFAGELAESSLVYAAGVQRAPSHAALRAEAKR--AAAFPL-APRSADQITVDLFGGGAPRSGGAPGGGTFASEFTAIPLPEGSYGSRPESVDLQAGAETFGERPRVFVSQR---PLLPKPTCERYIAAAEAWAARS-GGWTTARHHSVATTDIPLTSLDELLPSFNEALRTLLLP------------ALSACYPE----------------AAPLASSLRVLDCFLVRYDATKQASLPTHTDQSLLSFTIALNDPGEYDGGGTWFRGLGRAVDAPAAGHAVLFPG-KVEHGGHPITRGVRYIIVLFMGYE 969
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Match: A0A7S3T9C2_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T9C2_EMIHU) HSP 1 Score: 142 bits (357), Expect = 5.310e-37 Identity = 91/193 (47.15%), Postives = 111/193 (57.51%), Query Frame = 1
Query: 529 LSRSECALVIQEAEETAASSRNGWGTARHYAVPTTDIAVRDLPRTLAWFNTAMRDRIAPLVAAAAALGAGEAFGVCAKEDEDEDITGLEEEEEEELGAFVARLRVHDAFVVRYDAAA-QRSLPLHTDQGELSLTISLNSGDEYEGGGTWFHGLGRAVRPADPGHVVIFPGGEAVHGGCAITSGIRYILAVFLY 1104
S +EC + AE AA S GW T+RH AVPTTD+ V ++P L WFN AM RIAPL+AA F V A A +RVHDAF+VRY A+ Q LPLHTD+ LSLT+ LN DE+EGGGT+F L R++ P GH+V F G A+HGG I SG+RYI+A FLY
Sbjct: 2 FSAAECERAVAAAEAHAAKS-GGWTTSRHRAVPTTDVPVHEVPELLRWFNHAMAGRIAPLLAAQ--------FRVAA-----------------------ADIRVHDAFLVRYSASGGQAHLPLHTDESVLSLTVVLN--DEFEGGGTFFADLRRSLSPP-VGHLVAFHG-RALHGGEPIVSGVRYIVAAFLY 158
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Match: R1DHQ3_EMIHU (Fe2OG dioxygenase domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DHQ3_EMIHU) HSP 1 Score: 143 bits (361), Expect = 7.960e-36 Identity = 98/218 (44.95%), Postives = 120/218 (55.05%), Query Frame = 1
Query: 457 ADSLDVTFMAGPGEWVSETRGPPPL-SRSECALVIQEAEETAASSRNGWGTARHYAVPTTDIAVRDLPRTLAWFNTAMRDRIAPLVAAAAALGAGEAFGVCAKEDEDEDITGLEEEEEEELGAFVARLRVHDAFVVRYDAAA-QRSLPLHTDQGELSLTISLNSGDEYEGGGTWFHGLGRAVRPADPGHVVIFPGGEAVHGGCAITSGIRYILAVFLY 1104
A +V +AG G PL S +EC + AE AA S GW T+RH AVPTTD+ V ++P L WFN AM RIAPL+AA F V A A +RVHDAF+VRY A+ Q LPLHTD+ LSLT+ LN DE+EGGGT+F L R++ P GH+V F G A+HGG I SG+RYI+A FLY
Sbjct: 158 AAPCEVHALAGGGPACKVVVSRSPLFSAAECERAVAAAEAHAAKS-GGWTTSRHRAVPTTDVPVHEVPELLRWFNHAMAGRIAPLLAAQ--------FRVAA-----------------------ADIRVHDAFLVRYSASGGQAHLPLHTDESVLSLTVVLN--DEFEGGGTFFADLRRSLSPP-VGHLVAFHG-RALHGGEPIVSGVRYIVAAFLY 339
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Match: A0A5B8MSU2_9CHLO (Fe2OG dioxygenase domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MSU2_9CHLO) HSP 1 Score: 147 bits (372), Expect = 1.700e-35 Identity = 105/349 (30.09%), Postives = 150/349 (42.98%), Query Frame = 1
Query: 85 RLATDEDRLDDAADALRRAAQLSPLDGDVLYRAGVCAINQGRWSRAVRLWREGLMLSPDNSQLKHEAERYRALAFWLDSPHDSGAECQDIRPFSHPNPLXXXXXXXXXXXXXXXXXXXDRACGLADSLDVTFMAGPGEWVSETRGPPPLSRSECALVIQEAEETAASSRNGWGTARHYAVPTTDIAVRDLPRTLAWFNTAMRDRIAPLVAAAAALGAGEAFGVCAKEDEDEDITGLEEEEEEELGAFVARLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNSGDEYEGGGT-------WFHGLGRAVRPADPGHVVIFPGGEAVHGGCAITSGIRYILAVFLYEH 1110
+LA DE+R DA + + ++S DG+ + G +N GRWS+ W+ G ++ ++ E E A + + + AE +D D D F+ G P ++ EC +I EAE A +NGW T RHY+VPTTD+ LP L N ++RD I P +A+ + G + L+VHDAFV++Y Q+ LP+HTDQ S TI LN EY GGG + G G V+ + G +F GGE HGG ITSGIRYI+A+F++ H
Sbjct: 426 KLAFDEERYSDACELYEKRLEVSKQDGETWHNYGRALVNMGRWSKGYEAWKLGAEVTRESGSPHDELETLMAAHRYF-TYRTTDAEDRDSA-----------------GAEPSEEDEADDRLPRHLRQDAFFL-----------GSPVMTLDECKEIIDEAESHA-REKNGWSTKRHYSVPTTDLPAHALPGCLGILNRSLRDHIFPAIAS-------------------------------KFGEELEDLQVHDAFVIKYSMDGQKFLPIHTDQSHYSATIGLNPTSEYGGGGIIIVEDGGFEEGEGHVVK-VEEGGAFVFRGGELSHGGRNITSGIRYIIALFIFSH 712
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Match: C1MHS0_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MHS0_MICPC) HSP 1 Score: 145 bits (366), Expect = 1.410e-34 Identity = 81/194 (41.75%), Postives = 111/194 (57.22%), Query Frame = 1
Query: 523 PPLSRSECALVIQEAEETAASSRNGWGTARHYAVPTTDIAVRDLPRTLAWFNTAMRDRIAPLVAAAAALGAGEAFGVCAKEDEDEDITGLEEEEEEELGAFVARLRVHDAFVVRYDAAAQRSLPLHTDQGELSLTISLNSGDEYEGGGTWFHGLGRAVRPADPGHVVIFPGGEAVHGGCAITSGIRYILAVFLY 1104
P LS EC I AE AA +R GW T+RHYAVPTTD+ V + + +N MR++++PL+AAA A ++ A + +RVHD FVVRYDA+AQ LP+H DQ +SLT++LN GD ++GGGT F LG P + GH +F G + HGG +T G+RY++A FL+
Sbjct: 731 PLLSERECLEWIAAAEAHAAKTRGGWTTSRHYAVPTTDLPVHAVEALVPRWNDLMREKLSPLLAAACA----------------------------DVVARASSVRVHDVFVVRYDASAQHHLPIHVDQSAVSLTLALNGGDAFDGGGTTFADLGVTCSP-ETGHAAVFRG-DLRHGGAPVTRGVRYVVAAFLF 894 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9299.16747.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig9299.16747.1 >prot_H-elongata_contig9299.16747.1 ID=prot_H-elongata_contig9299.16747.1|Name=mRNA_H-elongata_contig9299.16747.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=371bp VEGAAEERDESVAPGVAPIGIEELLESARLATDEDRLDDAADALRRAAQLback to top mRNA from alignment at H-elongata_contig9299:3209..6128- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig9299.16747.1 ID=mRNA_H-elongata_contig9299.16747.1|Name=mRNA_H-elongata_contig9299.16747.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2920bp|location=Sequence derived from alignment at H-elongata_contig9299:3209..6128- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig9299:3209..6128- >mRNA_H-elongata_contig9299.16747.1 ID=mRNA_H-elongata_contig9299.16747.1|Name=mRNA_H-elongata_contig9299.16747.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2226bp|location=Sequence derived from alignment at H-elongata_contig9299:3209..6128- (Himanthalia elongata Himel1 dioecious)back to top |