mRNA_H-elongata_contig92420.16697.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Match: A0A6H5JZN6_9PHAE (Aminotran_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZN6_9PHAE) HSP 1 Score: 180 bits (456), Expect = 1.480e-46 Identity = 91/142 (64.08%), Postives = 110/142 (77.46%), Query Frame = 1
Query: 1 PRLGRFEFWEANVAGRLGLGVALRYAMELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGAEAGAIKQSLRSQGVYVSTSSTASTPLDARDRSLPTVVRASVHYFNNEEDLDKFMLALHRAMQDFP 426
P RFEFWE+NVAGRLGLGVA+RYAM++GM+ IE+RIR +A +LR R+ EP V+++DLGR E QCGIVSF V G + IKQ LR + V+VSTSS STPLDA DR+LPTVVRASVHYFNN+ DLD+ M LH +Q P
Sbjct: 309 PDARRFEFWESNVAGRLGLGVAIRYAMDIGMELIEERIRQLAASLRERLKIEPGVSLLDLGRAENQCGIVSFAVPGVDPSDIKQKLRLEQVFVSTSSAGSTPLDAEDRALPTVVRASVHYFNNDGDLDRLMSVLHDVIQAAP 450
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Match: A9G8X4_SORC5 (Probable class-V aminotransferase n=6 Tax=Sorangium cellulosum TaxID=56 RepID=A9G8X4_SORC5) HSP 1 Score: 134 bits (337), Expect = 1.130e-30 Identity = 72/137 (52.55%), Postives = 96/137 (70.07%), Query Frame = 1
Query: 1 PRLGRFEFWEANVAGRLGLGVALRYAMELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGAEAGAIKQSLRSQGVYVSTSSTASTPLDARDRSLPTVVRASVHYFNNEEDLDKFMLALHRA 411
P RFE WE+ VAGRLGLG A YA+ LG+ AI DR+ +A LR R++ P VT+ DLG E +CGIV+FT AG +A AIK+ L +Q ++VS S+ A T LD DR +P +VRASVHY+N+E ++D+F+ AL A
Sbjct: 256 PDARRFENWESYVAGRLGLGAAAEYALRLGLPAIRDRVGALAERLRARLSEIPGVTVRDLG--EQRCGIVTFTRAGEDATAIKERLAAQAIHVSVSTAAGTLLDFEDRGIPDLVRASVHYYNDESEIDRFVAALAAA 390
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Match: A0A2L0EL05_SORCE (Aminotransferase class V n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0EL05_SORCE) HSP 1 Score: 128 bits (322), Expect = 1.160e-28 Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 1
Query: 1 PRLGRFEFWEANVAGRLGLGVALRYAMELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGAEAGAIKQSLRSQGVYVSTSSTASTPLDARDRSLPTVVRASVHYFNNEEDLDKFMLALHRA 411
P RFE WE+ +AGRLGLG A+ YA+ LG+ AI DR+ +A LR R+A P V + DLG E +CGIVSFT AG A A+K L +Q ++VS S+ T LD R LP +VRASVHY+N+E ++D+F+ AL A
Sbjct: 256 PDARRFENWESYIAGRLGLGAAVEYALTLGLPAIRDRVSALAERLRARLAEVPGVAVRDLG--EQRCGIVSFTRAGEHAAAVKARLGAQAIHVSVSTAGGTRLDFEARGLPDLVRASVHYYNDEAEIDRFIGALAAA 390
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Match: UPI00142302BC (aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Rhodocaloribacter litoris TaxID=2558931 RepID=UPI00142302BC) HSP 1 Score: 128 bits (321), Expect = 1.690e-28 Identity = 65/130 (50.00%), Postives = 95/130 (73.08%), Query Frame = 1
Query: 1 PRLGRFEFWEANVAGRLGLGVALRYAMELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGAEAGAIKQSLRSQGVYVSTSSTASTPLDARDRSLPTVVRASVHYFNNEEDLDKF 390
P RFE WE NVAG++ LGVA+ YA+ G++AI DR++ +A LR+R+A P +T+ DLGR T+CG+V+FT + EA I + LR++G+ VS ++ AST LDA R+LP +VRASVHY+N E ++++F
Sbjct: 256 PDARRFETWEGNVAGKIALGVAVDYALHWGLEAIRDRVQRLAERLRHRLAELPGITVRDLGR--TRCGLVTFTSSLMEADEIHRHLRARGINVSVTTPASTRLDAEARNLPPMVRASVHYYNTENEIERF 383
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Match: UPI00041FD46B (aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI00041FD46B) HSP 1 Score: 127 bits (318), Expect = 3.890e-28 Identity = 68/134 (50.75%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 1 PRLGRFEFWEANVAGRLGLGVALRYAMELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGAEAGAIKQSLRSQGVYVSTSSTASTPLDARDRSLPTVVRASVHYFNNEEDLDKFMLAL 402
P RFE WE NVA R+GLGVA+ YA+ +G+ AI DR+R +A LR+R+A P VT+ D RG +C IV+FTV G A ++K +LR+QG+ VS S +ST D R L VVRAS HY+N EE+LD+ + A+
Sbjct: 254 PDARRFELWECNVAARIGLGVAVDYALSVGLDAIRDRVRGLAGLLRDRLATLPGVTVRD--RGRERCAIVTFTVEGRAAASVKAALRAQGINVSVSVASSTRFDMDARGLSEVVRASPHYYNTEEELDRLVAAV 385
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Match: A0A2T2TX38_9BACT (Aminotransferase n=1 Tax=Bacteroidetes bacterium QH_2_63_10 TaxID=1919092 RepID=A0A2T2TX38_9BACT) HSP 1 Score: 125 bits (315), Expect = 1.100e-27 Identity = 67/134 (50.00%), Postives = 95/134 (70.90%), Query Frame = 1
Query: 1 PRLGRFEFWEANVAGRLGLGVALRYAMELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGAEAGAIKQSLRSQGVYVSTSSTASTPLDARDRSLPTVVRASVHYFNNEEDLDKFMLAL 402
P RFE WE++VAG++GLGVA+ YA+ LG+ AI DRI+HVA LR ++ P VT+ D+G +T+ GI +F+ +A AI+ +LR +G+ VS S +ST LDA R LP +VRASVHY+N EE+++ F+ AL
Sbjct: 256 PDARRFENWESHVAGQVGLGVAVNYALNLGLDAIFDRIQHVAATLRGALSAVPGVTVHDVG--QTRSGITTFSAEQKDAEAIRTALRERGINVSVSGPSSTRLDAEARDLPDLVRASVHYYNTEEEIEHFVRAL 387
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Match: A0A150QZT8_SORCE (Aminotransferase class V n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150QZT8_SORCE) HSP 1 Score: 125 bits (313), Expect = 1.830e-27 Identity = 67/137 (48.91%), Postives = 94/137 (68.61%), Query Frame = 1
Query: 1 PRLGRFEFWEANVAGRLGLGVALRYAMELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGAEAGAIKQSLRSQGVYVSTSSTASTPLDARDRSLPTVVRASVHYFNNEEDLDKFMLALHRA 411
P RFE WE++VAGRLGLG A+ YA+ LG+ AI DR+ +A LR R+A P V + DLG+ +CGIV+FT G +A A+K L +Q ++VS S+ + T LD R +P +VRASVHY+N+E ++D+F+ AL A
Sbjct: 256 PDARRFESWESHVAGRLGLGAAVDYALRLGLPAIRDRVCALAERLRARLAELPGVAVRDLGK--RRCGIVTFTREGEDATAVKARLGAQAIHVSVSTASGTLLDFEARGIPDLVRASVHYYNDEPEIDRFVAALAAA 390
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Match: A0A2T2V500_9BACT (Aminotransferase n=1 Tax=Bacteroidetes bacterium SW_11_64_17 TaxID=1919114 RepID=A0A2T2V500_9BACT) HSP 1 Score: 124 bits (310), Expect = 4.810e-27 Identity = 67/134 (50.00%), Postives = 93/134 (69.40%), Query Frame = 1
Query: 1 PRLGRFEFWEANVAGRLGLGVALRYAMELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGAEAGAIKQSLRSQGVYVSTSSTASTPLDARDRSLPTVVRASVHYFNNEEDLDKFMLAL 402
P RFE WE+++AG++ LGVA+ YA++ G+ AI DR RH+AR LR+R+A P VT+ D GR +CGI +F+ EA AI+ +LR + V S S+ +ST LDA R LP +VRASVHY+N E +LD+F+ L
Sbjct: 256 PDARRFENWESHIAGQVALGVAVDYALDRGLDAILDRNRHLARTLRDRLAEIPSVTVHDQGR--RRCGITTFSSTQMEAAAIQGALRDRDVNTSVSTPSSTRLDAETRDLPDLVRASVHYYNTEAELDRFVTIL 387
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Match: A0A150RUG8_SORCE (Aminotransferase class V n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150RUG8_SORCE) HSP 1 Score: 123 bits (308), Expect = 8.430e-27 Identity = 67/134 (50.00%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 1 PRLGRFEFWEANVAGRLGLGVALRYAMELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGAEAGAIKQSLRSQGVYVSTSSTASTPLDARDRSLPTVVRASVHYFNNEEDLDKFMLAL 402
P RFE WE +AGRLGLG A+ YA+ LG+ AI DR+ +A LR R+A P VT+ D+G +CGIV+FT AG +A AIK L +Q ++VS S+ A T LD R +P +VRASVH +N+E ++D+F+ AL
Sbjct: 256 PDARRFETWEGYIAGRLGLGAAIDYALGLGLPAIRDRVVALAERLRARLAELPGVTVRDVGA--ERCGIVTFTRAGEDAAAIKARLGAQAIHVSVSTAAGTLLDFEARGIPDLVRASVHCYNDESEIDRFVAAL 387
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Match: A0A537LWG9_9BACT (Aminotransferase class V-fold PLP-dependent enzyme n=1 Tax=Terrabacteria group bacterium ANGP1 TaxID=2569760 RepID=A0A537LWG9_9BACT) HSP 1 Score: 122 bits (306), Expect = 1.580e-26 Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 1
Query: 1 PRLGRFEFWEANVAGRLGLGVALRYAMELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGAEAGAIKQSLRSQGVYVSTSSTASTPLDARDRSLPTVVRASVHYFNNEEDLDKFMLAL 402
P RFE WE N AG++ LGVA+ YA+ +G++ I DR+ +A +LR R+ P V + DLG +CGIV+FTVAG EA A+++ LR Q + +S SS ST LD R L T+ RASVHY+N EE++D+F+ A+
Sbjct: 256 PDARRFENWETNAAGKIALGVAVDYALGVGLEPIRDRVYLLAGSLRERLNATPGVRVHDLGA--ERCGIVTFTVAGVEAEAVRERLRRQRINISASSRGSTRLDMEARGLSTLARASVHYYNTEEEVDRFVRAV 387 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig92420.16697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig92420.16697.1 >prot_H-elongata_contig92420.16697.1 ID=prot_H-elongata_contig92420.16697.1|Name=mRNA_H-elongata_contig92420.16697.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=124bp MELGMQAIEDRIRHVARALRNRIAREPRVTIMDLGRGETQCGIVSFTVAGback to top mRNA from alignment at H-elongata_contig92420:76..2369+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig92420.16697.1 ID=mRNA_H-elongata_contig92420.16697.1|Name=mRNA_H-elongata_contig92420.16697.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2294bp|location=Sequence derived from alignment at H-elongata_contig92420:76..2369+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig92420:76..2369+ >mRNA_H-elongata_contig92420.16697.1 ID=mRNA_H-elongata_contig92420.16697.1|Name=mRNA_H-elongata_contig92420.16697.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=744bp|location=Sequence derived from alignment at H-elongata_contig92420:76..2369+ (Himanthalia elongata Himel1 dioecious)back to top |