mRNA_H-elongata_contig903.16515.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig903.16515.1
Unique NamemRNA_H-elongata_contig903.16515.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: D8LRT0_ECTSI (Kelch motif family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT0_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 1.280e-169
Identity = 211/273 (77.29%), Postives = 243/273 (89.01%), Query Frame = 1
Query:  172 MTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMVFEL 990
            MTWQEVRCGGDLP  RYGHSCH+VGSRMF++GG+G  GQLYRDVHFLDLVDWTWV VNATSTGP PRFWQ SVLVGHKIV+HGGWNG N C++DLWVFDTDSF+WMQPRTGGLPP+ARYGH+M+LLPDGRIL+ GGAT+++ CVP YH DLRQLDTETMLWSKAKT   ++IS RCNHTLTSDEEGR+A+LFGGWGLGGLQ+   NKR GAVTL AC+M  ++ ++ N+P+LRGRGEPEH+YGH  VSVGNAFFVFGGW GQQA ++++VFEL
Sbjct:    1 MTWQEVRCGGDLPDARYGHSCHLVGSRMFIVGGKGRSGQLYRDVHFLDLVDWTWVAVNATSTGPSPRFWQASVLVGHKIVVHGGWNGSNHCYEDLWVFDTDSFAWMQPRTGGLPPTARYGHAMVLLPDGRILLSGGATIDEKCVPVYHKDLRQLDTETMLWSKAKTTGGIRISSRCNHTLTSDEEGRAALLFGGWGLGGLQHHENNKRAGAVTLAACSMLPHEAVSTNLPLLRGRGEPEHKYGHTCVSVGNAFFVFGGWNGQQACNEIVVFEL 273          
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A7S4D7S8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7S8_HETAK)

HSP 1 Score: 393 bits (1010), Expect = 1.530e-133
Identity = 191/335 (57.01%), Postives = 228/335 (68.06%), Query Frame = 1
Query:   10 TWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQL-----YRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVN----DICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMVFE 987
            +W+K    G R+  RGGH+ VVAD+QL+VFGGT Y G GKF YL DT VLD+E+MTWQ VRCGG+LP+PRYGH+C +VGSRMFV+GG+G          +RDVH LDLVDW WV +NATSTGP PRF   S  VG KIV+HGGW+G   C  DLWVFDTDSF+W+QPR GGLPPS RYGH++ LLPDGR+L  GGA V         P Y  DLRQLDTETM WSK     + K+SGR  HT T  +   +  +FGGWGLGGLQ + TN RDGA ++ A  +   +     +P LR R  PEHRYG     VG+   VFGGW GQQA SD++  E
Sbjct:   15 SWSKVTPQGYRLTPRGGHSAVVADYQLIVFGGTSYDGGGKFSYLNDTCVLDVETMTWQLVRCGGNLPAPRYGHACELVGSRMFVLGGKGXXXXXXXXGCFRDVHALDLVDWVWVPINATSTGPSPRFNAASAAVGRKIVVHGGWDGEAACLGDLWVFDTDSFAWVQPRVGGLPPSPRYGHTLTLLPDGRLLALGGAAVPAPGAGAVAPQYLEDLRQLDTETMAWSKPARAGE-KLSGRFGHTTTLLDSS-ALFIFGGWGLGGLQEKATNNRDGAHSVCAIGIEGNEA-RYAVPALRSRKAPEHRYGQTCTRVGSMLLVFGGWNGQQALSDLIAIE 346          
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A836CGB4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB4_9STRA)

HSP 1 Score: 358 bits (919), Expect = 4.050e-119
Identity = 179/352 (50.85%), Postives = 227/352 (64.49%), Query Frame = 1
Query:   13 WTKAAT--SGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVN-DICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLT-----SDEEGR---------------SAILFGGWGLGGLQ----NQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMVFE 987
            WT+A T  +G R+PARGGH+CV AD QLVVFGG YY+G  KF YL D W++D E ++WQ V+C G  P PRY H C +VGSRMFVIGG+G   +L+RDV FLDL+ WTW  V+ T+ GP  RF   S LVG KIV+HGGWNG + C+ DLWVF+T+SFSW+QP+TGG+ P AR+GH ++L+PDGR+L FGGA+ +    VP Y SDLRQLDTETM WSK +T   V  +GR  HTLT       EEG                S +L+GGWG+GGLQ      GT K+     +     P    + + +P   G GE   R+GH    VG+  FVFGGW  QQA SD+++ +
Sbjct:   11 WTRAQTQTNGVRIPARGGHSCVSADMQLVVFGGHYYEGAHKFEYLNDVWLVDAEKLSWQPVQCSGTPPEPRYSHCCQLVGSRMFVIGGKGRGSKLFRDVWFLDLLSWTWYPVHPTTIGPTARFGHASTLVGRKIVVHGGWNGSDTCYGDLWVFNTESFSWLQPKTGGIAPCARFGHQLVLVPDGRLLCFGGASTSAQQPVPEYQSDLRQLDTETMAWSKPRTQGLVP-AGRYGHTLTLLQHQQGEEGGQXXXXXXXXXXGGGVSLVLYGGWGMGGLQAASVKGGTAKKSSVAVMDVAEEPQL--VDVEVPATVG-GEVVSRHGHTCCVVGSTVFVFGGWDAQQALSDLLMVQ 358          
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A7S1UIK9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIK9_9STRA)

HSP 1 Score: 354 bits (908), Expect = 2.900e-118
Identity = 171/332 (51.51%), Postives = 221/332 (66.57%), Query Frame = 1
Query:    1 PIVTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQ-NQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEP-EHRYGHASVSVGNAFFVF-GGWTGQQASSDVMVFE 987
            P + W K   +G   PARGGH+ V+A+ QLVVFGG YYKGD  F Y  D +VLD+ES+TWQ V C G++P PRYGHS  +VGSRMFV+GG+G +G+L+RD++FLDL+DW WV VNAT+ GP PRF   ++LVG KIV+HGGW+G  +C  D WVFDT +F+W+QPR  GLPPS R+GH++ LLPDGRI+ FGGA V+++ VP Y+ D RQLD E M WSK ++   +  S R  HT      G   +LFGGWG GG Q  +  NKR GAVT +     ++D            G P +H YGH   ++     VF GGW G +A SD++V E
Sbjct:   11 PQLAWAKQLCNGQIPPARGGHSAVLAESQLVVFGGHYYKGDSAFEYSNDVYVLDVESLTWQRVTCSGEVPEPRYGHSAVLVGSRMFVMGGKGSQGRLFRDMYFLDLIDWKWVPVNATTAGPTPRFEHATLLVGRKIVLHGGWDGNTRCMGDTWVFDTATFTWIQPRISGLPPSPRHGHTLNLLPDGRIVCFGGAGVDNMGVPLYYDDFRQLDPEKMQWSKVRSSGMLP-SARMGHTCVL--LGNRLVLFGGWGYGGCQCPEEGNKRQGAVTAL-----VFDIAKGKWSTTEHGGRPAQHTYGHTCDTIAGTTMVFYGGWNGHEAVSDLVVME 334          
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A067BWJ1_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BWJ1_SAPPC)

HSP 1 Score: 281 bits (720), Expect = 3.050e-89
Identity = 142/359 (39.55%), Postives = 205/359 (57.10%), Query Frame = 1
Query:    4 IVTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDI--CVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPL-------YDPITINMPVLRGRGEPEH---------------------RYGHASVSVGNAFFVFGGWTGQQASSDVMVFEL 990
            +++W+     G    ARGGH+ ++A  QLV+FGG Y+ G+  FVYL + WVLD+E+  W +V+C G  P+PRY HS  +VG++MFV GG+G KG++YRD+H+LDL  W W  VN T+  PP R     + VG K+V  GGW+G+N+   DLWVFDT++F+W+QP   G PP+ARYGHSM LL DGRI+++GG +V  +      Y +DL  LDTETM W + +   D  I    +HT+T    GR+  + GGW   G +       D A+   A  +         YD   ++   L G  +  H                     RYGH++  VG   F+FGGW G ++ ++++V +L
Sbjct:   20 VMSWSMPPMDGSPPTARGGHSMLLAGQQLVLFGGHYFGGEAGFVYLNEVWVLDLETSAWSQVKCEGKPPAPRYSHSATLVGAKMFVFGGKGDKGKIYRDMHYLDLETWHWYVVNWTTESPPERLGHSDLAVGTKLVFFGGWDGQNKTFKDLWVFDTETFAWLQPHVAGTPPTARYGHSMALLDDGRIVLYGGQSVKTVPEVRVEYFNDLYTLDTETMAWMRPRVTGDQPIP-TFSHTMTM--VGRTLYIVGGWS--GTERSPIYMGDKAMRTTAKALAREERLQSGYDAQPVDYRRLLGVSKYVHAIDCDSMVWSQPISEGCHVTNRYGHSAAVVGTHLFLFGGWDGNRSMNELVVADL 373          
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A6G0XGZ5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGZ5_9STRA)

HSP 1 Score: 270 bits (690), Expect = 7.150e-85
Identity = 146/363 (40.22%), Postives = 198/363 (54.55%), Query Frame = 1
Query:    4 IVTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVN---DICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMP---------------------------LYDPITINMPVLRGRG-EPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMVFELGES 999
            + TW+  +  G    ARGGHT ++A  +LV+FGG Y+ GDG FVYL DT  LD+E+ TW +V+C G  P+PRY HS  +VG++MFV GG+G KG L+RD+H+LDL  W W  V  T+  P  RF    V VG KIVI GGW+G ++   DLWVFDT+SF+W++P+  G PP  R GH M LL DGRILVFGG  +    D+    Y +D+  LDTETM+WS+ +T  D  + G   HT+ +D       + GGW   G +       D  V   A  +                            + D  T+     R +G    +RYGH    VG   F+FGGW G +A   ++V  L ++
Sbjct:   11 VFTWSAPSMDGLPPSARGGHTMLLAGQRLVLFGGHYFGGDGAFVYLNDTHALDLETSTWCQVKCQGKPPAPRYNHSATLVGNKMFVFGGKGGKGTLFRDMHYLDLESWHWYSVTWTTESPSERFGHADVAVGTKIVISGGWDGSSKTFKDLWVFDTESFAWIKPKVTGTPPPPRQGHKMALLDDGRILVFGGYALKASGDLS-GEYFNDVYALDTETMIWSRPRTTGDFPL-GTFGHTICADSF--KVYVVGGWS--GTERSPITMGDKVVNETAKALAREQSLRSGDNVSAKSFKAELSKSKYLHVLDCATMEWSCPRSQGLAVANRYGHTCALVGPHLFLFGGWDGNRALHQLVVAALPDN 367          
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A8J2SKS0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKS0_9STRA)

HSP 1 Score: 267 bits (682), Expect = 4.130e-84
Identity = 136/331 (41.09%), Postives = 182/331 (54.98%), Query Frame = 1
Query:    1 PIVTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDIC-VPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMVFEL 990
            P +++ +  T GD   ARGGH+  +A+ Q+++FGG+ Y   G+F Y  DT+ LD E   W +V C G+ P+PRYGHS  ++GSRMFV GGRG  G L R                                         GW+G  QC  DLWVF++D+F+W+QPR  G+ PS RYGHS+ LL DGRIL FGG TV+ I  VP YH+DLRQLDTETM+W+K+        S R  HT T  + G   I+FGGWG GGLQN+  N+       +  + P        +P  +   E  H+YGH   +VG   ++ GGW G+QA+SD+    L
Sbjct:    8 PALSFARIVTDGDSPSARGGHSAAMAEDQVIIFGGSCYTSGGRFAYFNDTFTLDTEHHLWHKVACSGEAPTPRYGHSAELIGSRMFVFGGRGEVGTL-RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGWDGHMQCMGDLWVFNSDTFTWVQPRCAGIQPSPRYGHSLSLLTDGRILCFGGCTVSSIFPVPQYHNDLRQLDTETMIWTKSTIQGGEPPSKRHGHTTT--KVGNGLIVFGGWGSGGLQNRACNQEGSGSFRLLESSPGTSIERWTVP--QTYQEIAHKYGHTMSAVGTRLYIIGGWNGKQATSDIYQIHL 333          
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A1V9YGE9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGE9_9STRA)

HSP 1 Score: 268 bits (685), Expect = 4.710e-84
Identity = 138/358 (38.55%), Postives = 201/358 (56.15%), Query Frame = 1
Query:    7 VTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDI--CVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPL-------YDPITINMPVLRGRGEPEH---------------------RYGHASVSVGNAFFVFGGWTGQQASSDVMVFEL 990
            +TW+     G     RGGHT ++A  QLV+FGG Y+ G+  FVYL + WVLD+E+  W +V+C G  P+PRY H+  +VG++MFV GG+G KG+ YRD+H+LDL  W W  VN T+  P  RF    + VG K+V  GGW+G+N+ + DLWVFDT++F+W+QP+  G PP+ARYGH+M LL DGRI+++GG +V  +      Y +D+  LDTETM W++ +   D  +     H +  D  GR+  + GGW   G +       D A+   A  +         YD   ++   L G  +  H                     RYGH +  VG   F FGGW G ++ ++++V +L
Sbjct:   14 LTWSTPPMDGFPPSPRGGHTMLLAGQQLVLFGGHYFGGESGFVYLNEVWVLDLETSAWCQVKCEGKPPAPRYNHTATLVGAKMFVFGGKGDKGKAYRDMHYLDLETWHWFVVNWTTDSPTERFGHADLAVGTKLVYFGGWDGQNKTYKDLWVFDTETFAWIQPKVAGTPPTARYGHTMGLLDDGRIVLYGGQSVKMLPQVGVEYFNDVYMLDTETMAWTRPRITGDQPVP-TFGHRMIID--GRTVYVVGGWS--GTERSPIFMGDKALRTTAKALAREERLQSGYDAQPVDYRRLLGVSKYVHALDVDGMVWTQPISEGCQVSNRYGHGAAVVGAHVFFFGGWDGNRSMNELVVADL 366          
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A7S2SVI7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVI7_9STRA)

HSP 1 Score: 262 bits (670), Expect = 9.090e-83
Identity = 138/307 (44.95%), Postives = 170/307 (55.37%), Query Frame = 1
Query:   40 RVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGLQNQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVGNAFFVFGGWTGQQ 960
            R   RGGHT V  D  +VVFGG  Y GDGKF Y  DT V D+E+ TW  V+C G++P PRYGHS  +VG+RMF+ G                                                   GW+G+ QC DDLWVFDTDSF+WMQP+T G  PSARYGHS+ LL DGRIL FGG ++ D  +P YH DLRQL TETM WSK +   +V  SGR  HTL +   G   +LFGGWGLGG Q    N R GA +++  ++   + +T   P+   +  P HRYGH    +G   FVFGGW G+Q
Sbjct:    1 RPEPRGGHTAVQVDSSIVVFGGHSYAGDGKFEYYNDTHVFDVETSTWHLVKCSGEVPEPRYGHSVALVGNRMFMFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXGWDGKRQCMDDLWVFDTDSFTWMQPKTAGAGPSARYGHSLHLLEDGRILCFGGMSIPDNGIPEYHRDLRQLHTETMAWSKPRVDGEVPPSGRFGHTLCAF--GSQLVLFGGWGLGGNQTSAENPRAGAESIMMLDV---ESMTWWTPLPPRKTVP-HRYGHTVCLIGADLFVFGGWYGKQ 300          
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Match: A0A485L7W0_9STRA (Aste57867_17468 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7W0_9STRA)

HSP 1 Score: 261 bits (667), Expect = 5.640e-81
Identity = 146/379 (38.52%), Postives = 207/379 (54.62%), Query Frame = 1
Query:    4 IVTWTKAATSGDRVPARGGHTCVVADFQLVVFGGTYYKGDGKFVYLGDTWVLDIESMTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLVDWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGG----------------------WNGRNQCHDDLWVFDTDSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVN-----DICVPTYHSDLRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWG--------LGG---------------LQNQGTNKRDGAVTLVACNMPLY--DPITINMPVLRGRG-EPEHRYGHASVSVGNAFFVFGGWTGQQASSDVMV 981
            +VTW+     G    ARGGH+ ++A  +LV+FGG Y+ G+G FVYL DT+VLD+ S TW +V+C G  P+PRY HS  ++G++MFV GG+G KG L+RD+++LDL  W W  VN T+  P  RF    + VG K+VI GG                      W+G ++ + DLWVFDT+SF+W++P+  G PP+ R+GH+M LL DGRILVFGG  +      DI    YH D+  LDTETM W++ +T+ D  + G   HT + D  G+   + GGW         +G                LQ+  T         +A +  L+  D  T+       +G E  +RYGH +  VG   F+FGGW G +A   ++V
Sbjct:   17 VVTWSMPGMDGLPPSARGGHSTLLAGQRLVIFGGHYFGGEGFFVYLNDTYVLDLASSTWCQVKCEGKPPAPRYNHSATLIGNKMFVFGGKGDKGVLFRDMYYLDLESWHWFSVNWTTESPSERFGHADLAVGTKLVIFGGYSPLNPSDSTSDSVSDSNGQRRWDGSSKTYKDLWVFDTESFAWIKPKVTGTPPTPRHGHTMSLLEDGRILVFGGYMLQTSGGGDIS-GEYHKDVYTLDTETMAWTRPRTMGDFPL-GTFGHTTSLD--GQKLYVVGGWSGTERSQIYMGDKLVHETAKSLAREQRLQSGSTVSAKSFKAELATSKYLHVLDVATMEWYCPPSQGIEVANRYGHTATIVGPHLFLFGGWDGNRALHQLVV 391          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig903.16515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRT0_ECTSI1.280e-16977.29Kelch motif family protein n=1 Tax=Ectocarpus sili... [more]
A0A7S4D7S8_HETAK1.530e-13357.01Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A836CGB4_9STRA4.050e-11950.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S1UIK9_9STRA2.900e-11851.51Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A067BWJ1_SAPPC3.050e-8939.55Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A6G0XGZ5_9STRA7.150e-8540.22Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8J2SKS0_9STRA4.130e-8441.09Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A1V9YGE9_9STRA4.710e-8438.55Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S2SVI7_9STRA9.090e-8344.95Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A485L7W0_9STRA5.640e-8138.52Aste57867_17468 protein n=1 Tax=Aphanomyces stella... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig903contigH-elongata_contig903:10383..13401 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score485.0
Seed ortholog evalue2.4e-134
Seed eggNOG ortholog2880.D8LRT0
KEGG koko:K20285
EggNOG free text desc.nitrile biosynthetic process
EggNOG OGsKOG0379@1,KOG0379@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04131
Hectar predicted targeting categoryother localisation
Exons7
Model size1051
Cds size834
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931303.48718-UTR-H-elongata_contig903:10382..104281622931303.48718-UTR-H-elongata_contig903:10382..10428Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig903 10383..10428 -
1691679781.026665-UTR-H-elongata_contig903:10382..104281691679781.026665-UTR-H-elongata_contig903:10382..10428Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig903 10383..10428 -
1622931303.5907578-UTR-H-elongata_contig903:12654..127021622931303.5907578-UTR-H-elongata_contig903:12654..12702Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig903 12655..12702 -
1691679781.1088004-UTR-H-elongata_contig903:12654..127021691679781.1088004-UTR-H-elongata_contig903:12654..12702Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig903 12655..12702 -
1622931303.6029472-UTR-H-elongata_contig903:13107..132091622931303.6029472-UTR-H-elongata_contig903:13107..13209Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig903 13108..13209 -
1691679781.123542-UTR-H-elongata_contig903:13107..132091691679781.123542-UTR-H-elongata_contig903:13107..13209Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig903 13108..13209 -
1622931303.622226-UTR-H-elongata_contig903:13380..134011622931303.622226-UTR-H-elongata_contig903:13380..13401Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig903 13381..13401 -
1691679781.137085-UTR-H-elongata_contig903:13380..134011691679781.137085-UTR-H-elongata_contig903:13380..13401Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig903 13381..13401 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931303.50876-CDS-H-elongata_contig903:10428..105401622931303.50876-CDS-H-elongata_contig903:10428..10540Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig903 10429..10540 -
1691679781.0468943-CDS-H-elongata_contig903:10428..105401691679781.0468943-CDS-H-elongata_contig903:10428..10540Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig903 10429..10540 -
1622931303.5259745-CDS-H-elongata_contig903:10993..112101622931303.5259745-CDS-H-elongata_contig903:10993..11210Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig903 10994..11210 -
1691679781.0663078-CDS-H-elongata_contig903:10993..112101691679781.0663078-CDS-H-elongata_contig903:10993..11210Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig903 10994..11210 -
1622931303.5437648-CDS-H-elongata_contig903:11390..115421622931303.5437648-CDS-H-elongata_contig903:11390..11542Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig903 11391..11542 -
1691679781.0763564-CDS-H-elongata_contig903:11390..115421691679781.0763564-CDS-H-elongata_contig903:11390..11542Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig903 11391..11542 -
1622931303.5620358-CDS-H-elongata_contig903:11875..120281622931303.5620358-CDS-H-elongata_contig903:11875..12028Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig903 11876..12028 -
1691679781.0863345-CDS-H-elongata_contig903:11875..120281691679781.0863345-CDS-H-elongata_contig903:11875..12028Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig903 11876..12028 -
1622931303.5774832-CDS-H-elongata_contig903:12454..126541622931303.5774832-CDS-H-elongata_contig903:12454..12654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig903 12455..12654 -
1691679781.0970716-CDS-H-elongata_contig903:12454..126541691679781.0970716-CDS-H-elongata_contig903:12454..12654Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig903 12455..12654 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig903.16515.1prot_H-elongata_contig903.16515.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig903 10429..12654 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig903.16515.1

>prot_H-elongata_contig903.16515.1 ID=prot_H-elongata_contig903.16515.1|Name=mRNA_H-elongata_contig903.16515.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=278bp
MTWQEVRCGGDLPSPRYGHSCHIVGSRMFVIGGRGHKGQLYRDVHFLDLV
DWTWVKVNATSTGPPPRFWQGSVLVGHKIVIHGGWNGRNQCHDDLWVFDT
DSFSWMQPRTGGLPPSARYGHSMMLLPDGRILVFGGATVNDICVPTYHSD
LRQLDTETMLWSKAKTVDDVKISGRCNHTLTSDEEGRSAILFGGWGLGGL
QNQGTNKRDGAVTLVACNMPLYDPITINMPVLRGRGEPEHRYGHASVSVG
NAFFVFGGWTGQQASSDVMVFELGESA*
back to top

mRNA from alignment at H-elongata_contig903:10383..13401-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig903.16515.1 ID=mRNA_H-elongata_contig903.16515.1|Name=mRNA_H-elongata_contig903.16515.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3019bp|location=Sequence derived from alignment at H-elongata_contig903:10383..13401- (Himanthalia elongata Himel1 dioecious)
CCAATAGTTACCTGGACCAAGGTGATATATTGACGTGCAATATGCTTGTT CGCCGCTCAAACGGATCACAACACAAGATTCGTTGACACGGTCATTAATT TTCACGACGTGTTCGCATCGCAAGAGACTTGCGAACACGAGGATATGTGG TTGATTAGATCTACCGAATACTTAAATTATACACATACCCAGGCAGCTAC TAGTGGCGACCGTGTACCCGCGCGAGGAGGTCACACCTGCGTCGTGGCCG ATTTCCAGCTGGTGGTATTTGGGGGCACCTACTACAAAGGAGATGTACGA CTTTGCGAAGTTAACCTTGAACATTTTTCACGCTTACCGTACGTAGCATT TCCAATACATCACAGAAGAACACCGCCAGTTTGGTTATGTTGACAACCAC AGCTTTTTCACGTCTAAAATATTGGTGTAACTCGGTGCGAACCTATGACC AGTGGATGCTACGTCATAGCGAAATATGCTGCGAGTGCGATATTCAGTTC CCACACACTCAACCCTCGTCATTCGAAAGGTTCTGAAAGATGCGTCTGCT TTGTAGATTTCGTGGTATTGTTCTGTGTGACGTGATTCCATTTCAATCTA CAATCTACAGTACCTGGATTCAAATTCAGGAAAGGCCACAGCTACTAAGT ATGGGTTCGATTTTCCATCGGTCGTTTCAATCATTATAATCCTATCCAGG GAAAATTCGTGTACCTTGGAGACACGTGGGTGCTGGATATCGAGTCAATG ACATGGCAGGAGGTTCGATGTGGTGGGGATCTTCCCAGTCCTCGATACGG ACATTCTTGTCATATTGTTGGTTCTAGAATGTTCGTCATTGGCGGTAGAG GGCATAAAGGACAGCTCTACCGCGATGTGCATTTCTTAGACCTTGTGGAC TGGACATGGGTCAAGGTGAACGCCACGTCCACCGGACCGCCCCCCAGGTA CATGCAAAGATCGCGAGACGATAGTCTGCGATTTACCTGGGTGGGGAGAA GATGACGCGGGACGGGACGTCCGAACCCGTTTCGCGAGACCAAATTTTAA GGCGCGAATGAGGACATGGAGTATTTATTTTCCCTGTTCAGCTGACCACG AGCAAGATTGGCAACCATATTCAGTTGATCCATACTCTACTATATATGAT GACCATATAAACAAACGCACACACGTATTGGTACAAGCAACCAAGACTTC ATATTCACAAATGAACGAGGGAAACCGATCACGGTACAGTTCAACAATAT TGCCCTGAATTACGATATGCTAGGACCATAAGGTAACTATTGTGACGTTC GCCAGTAAGAGCAGATGGACTTTGATCTGGACCGTGTTCGCCCTTTATCA TTAACAATCGATATGTTTGGCAGGTTTTGGCAAGGGTCCGTCTTAGTTGG CCACAAAATTGTCATCCATGGTGGCTGGAATGGTAGGAATCAATGTCACG ACGACCTTTGGGTGTTTGACACGGATTCATTCTCATGGATGCAGCCTCGA ACAGGGGGGCTTCCACCAAGTGCTAGGTGAGGCCGGGGAACGTTTTGTCC GTCAATCTTACTCATTATTCCTCCAAGTACACCATGAATTTTAACACTTA ACTTGTACTCAGGTATGCGTATACTGTAGTATGCGATAAACTTAGTTTGG ACAACATAATTTGAGGTATCGTAAGATTAAAGACACTCATTCGAAGCCCC CTATTGCGTGAGAAAATATCTTCTCTAGATCAAGCATGGATTCGTGTTGC CTTTCTCATAGGAGATGAACATTACTCGAGTTCCTTCGTGGTGACTGAAA CAAAATTGTATCTGACGATCTGACGAAATGATCACGCCTACTTGACAATT TCTTCTTAGGTACGGACACAGCATGATGCTCCTCCCAGACGGAAGAATAT TAGTATTCGGGGGAGCTACAGTGAACGATATATGTGTCCCCACTTACCAC AGCGACTTGAGACAGTTGGACACGGAGACGATGCTCTGGTCCAAGGCGAA GACAGTAGACGGTGAGAACGGAAACTAATGCGTAATAAGAATAATAGGTA AATTGTTTCAATTTTCAATATATACTACCAGGTATACTTTTTGTGAAGTT TCTCTACTGTATTTATCACGCAATTGTACGTCAAACACACTCGTTATAGC ATAATTTCTCCCCGCCATCGATTTATCCGTACTCACGACAGATGTGAAGA TATCTGGTAGGTGCAACCACACTCTCACATCGGACGAAGAGGGGCGATCG GCGATCCTATTTGGCGGGTGGGGTCTGGGGGGGTTACAAAACCAGGGAAC AAACAAGCGGGATGGCGCGGTGACACTCGTTGCGTGCAACATGCCCCTGT ATGATCCAATTACCATCAACATGCCCGTGCTGAGGGGTCGCGGAGAGCCA GAACACAGGTGATCATCACTCTTCATCGGAATCAGGAGTACGATTTCGTG TGTACGTTTGAGTCGTGCGAGTGAATGGTAATCAATTCGCGTAGCACGCG TGTACTTGGAAGGCGAAACCCTCTTACACTACGTATCGAGCCACCGACTG CTCAGATTTGTTTTTATATGACACGTTTAACAAAGAAGACTAGGAGCCCT AGAAAACTGAGAAATTGGTTTAATTATCAATTATATAACTTTGTCATCCC TCAACGATAAAATTACAGCAATTCCAATTTTGATTGTTACCATGAACAAC ATAACATGAATCCCACGATCCAAGAAACGATTAAAAATATTCACGAAAGC CTGCTGCTCAATCCTCGATTTTGCACACTGCGAGGTAACTTTATCGGTAC AACATTTCTTCTTTAAGCTAATCAATATCGAAATTGCTCTCACTGTGTTT GACCTGGCCAGGTACGGGCACGCGTCCGTCTCTGTCGGTAATGCTTTCTT TGTGTTTGGAGGTTGGACTGGTCAACAGGCCTCCAGCGACGTTATGGTGT TCGAACTTGGAGAAAGCGCGTGAATGGATTACAAATCTTCCAAGGCTGTT TTGATGCAGTTAATCAGGC
back to top

Coding sequence (CDS) from alignment at H-elongata_contig903:10383..13401-

>mRNA_H-elongata_contig903.16515.1 ID=mRNA_H-elongata_contig903.16515.1|Name=mRNA_H-elongata_contig903.16515.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1668bp|location=Sequence derived from alignment at H-elongata_contig903:10383..13401- (Himanthalia elongata Himel1 dioecious)
ATGACATGGCAGGAGGTTCGATGTGGTGGGGATCTTCCCAGTCCTCGATA
CGGACATTCTTGTCATATTGTTGGTTCTAGAATGTTCGTCATTGGCGGTA
GAGGGCATAAAGGACAGCTCTACCGCGATGTGCATTTCTTAGACCTTGTG
GACTGGACATGGGTCAAGGTGAACGCCACGTCCACCGGACCGCCCCCCAG
ATGACATGGCAGGAGGTTCGATGTGGTGGGGATCTTCCCAGTCCTCGATA
CGGACATTCTTGTCATATTGTTGGTTCTAGAATGTTCGTCATTGGCGGTA
GAGGGCATAAAGGACAGCTCTACCGCGATGTGCATTTCTTAGACCTTGTG
GACTGGACATGGGTCAAGGTGAACGCCACGTCCACCGGACCGCCCCCCAG
GTTTTGGCAAGGGTCCGTCTTAGTTGGCCACAAAATTGTCATCCATGGTG
GCTGGAATGGTAGGAATCAATGTCACGACGACCTTTGGGTGTTTGACACG
GATTCATTCTCATGGATGCAGCCTCGAACAGGGGGGCTTCCACCAAGTGC
TAGGTTTTGGCAAGGGTCCGTCTTAGTTGGCCACAAAATTGTCATCCATG
GTGGCTGGAATGGTAGGAATCAATGTCACGACGACCTTTGGGTGTTTGAC
ACGGATTCATTCTCATGGATGCAGCCTCGAACAGGGGGGCTTCCACCAAG
TGCTAGGTACGGACACAGCATGATGCTCCTCCCAGACGGAAGAATATTAG
TATTCGGGGGAGCTACAGTGAACGATATATGTGTCCCCACTTACCACAGC
GACTTGAGACAGTTGGACACGGAGACGATGCTCTGGTCCAAGGCGAAGAC
AGTAGACGGTACGGACACAGCATGATGCTCCTCCCAGACGGAAGAATATT
AGTATTCGGGGGAGCTACAGTGAACGATATATGTGTCCCCACTTACCACA
GCGACTTGAGACAGTTGGACACGGAGACGATGCTCTGGTCCAAGGCGAAG
ACAGTAGACGATGTGAAGATATCTGGTAGGTGCAACCACACTCTCACATC
GGACGAAGAGGGGCGATCGGCGATCCTATTTGGCGGGTGGGGTCTGGGGG
GGTTACAAAACCAGGGAACAAACAAGCGGGATGGCGCGGTGACACTCGTT
GCGTGCAACATGCCCCTGTATGATCCAATTACCATCAACATGCCCGTGCT
GAGGGGTCGCGGAGAGCCAGAACACAGATGTGAAGATATCTGGTAGGTGC
AACCACACTCTCACATCGGACGAAGAGGGGCGATCGGCGATCCTATTTGG
CGGGTGGGGTCTGGGGGGGTTACAAAACCAGGGAACAAACAAGCGGGATG
GCGCGGTGACACTCGTTGCGTGCAACATGCCCCTGTATGATCCAATTACC
ATCAACATGCCCGTGCTGAGGGGTCGCGGAGAGCCAGAACACAGGTACGG
GCACGCGTCCGTCTCTGTCGGTAATGCTTTCTTTGTGTTTGGAGGTTGGA
CTGGTCAACAGGCCTCCAGCGACGTTATGGTGTTCGAACTTGGAGAAAGC
GCGTGAGTACGGGCACGCGTCCGTCTCTGTCGGTAATGCTTTCTTTGTGT
TTGGAGGTTGGACTGGTCAACAGGCCTCCAGCGACGTTATGGTGTTCGAA
CTTGGAGAAAGCGCGTGA
back to top