mRNA_H-elongata_contig90202.16508.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig90202.16508.1 vs. uniprot
Match: A0A843UHH6_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UHH6_COLES) HSP 1 Score: 52.0 bits (123), Expect = 2.160e-6 Identity = 22/47 (46.81%), Postives = 30/47 (63.83%), Query Frame = 1
Query: 13 EWWRVYGKMGDMKDLARVAMRVLSKVPASAGAERNWSLFGGTHISMQ 153
+WW +G+ KDLA VA+RVLS+ ++ G ERNWS FG H +
Sbjct: 32 DWWLDHGRTYGYKDLAYVAIRVLSQTTSATGCERNWSTFGLIHTKQR 78
BLAST of mRNA_H-elongata_contig90202.16508.1 vs. uniprot
Match: UPI00064DD72F (uncharacterized protein LOC105954144 n=1 Tax=Erythranthe guttata TaxID=4155 RepID=UPI00064DD72F) HSP 1 Score: 49.7 bits (117), Expect = 1.530e-5 Identity = 21/49 (42.86%), Postives = 30/49 (61.22%), Query Frame = 1
Query: 7 PYEWWRVYGKMGDMKDLARVAMRVLSKVPASAGAERNWSLFGGTHISMQ 153
P WW YG G++K+L ++AMR+LS ++ G ERNWS F H +
Sbjct: 504 PALWWESYG--GEVKELQKIAMRILSLTCSATGCERNWSTFEQVHTKRR 550
BLAST of mRNA_H-elongata_contig90202.16508.1 vs. uniprot
Match: UPI001F5D9B65 (uncharacterized protein LOC124671119 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D9B65) HSP 1 Score: 48.1 bits (113), Expect = 2.490e-5 Identity = 20/51 (39.22%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 1 MPPYEWWRVYGKMGDMKDLARVAMRVLSKVPASAGAERNWSLFGGTHISMQ 153
M P EWW +G G++ +L + A+R++S+ +S+G ERNWS F H +
Sbjct: 1 MAPTEWWFQFG--GEVPNLQKCALRIVSQCVSSSGRERNWSAFAMVHTKQR 49
BLAST of mRNA_H-elongata_contig90202.16508.1 vs. uniprot
Match: UPI001F5D9FB2 (uncharacterized protein LOC124693233 n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D9FB2) HSP 1 Score: 48.5 bits (114), Expect = 3.880e-5 Identity = 20/51 (39.22%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 1 MPPYEWWRVYGKMGDMKDLARVAMRVLSKVPASAGAERNWSLFGGTHISMQ 153
M P EWW +G G++ +L + A+R++S+ +S+G ERNWS F H +
Sbjct: 115 MAPTEWWFQFG--GEVPNLQKCALRIVSQCVSSSGCERNWSAFAMVHTKQR 163
BLAST of mRNA_H-elongata_contig90202.16508.1 vs. uniprot
Match: UPI001D0106EC (uncharacterized protein LOC123176651 n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D0106EC) HSP 1 Score: 48.1 bits (113), Expect = 4.730e-5 Identity = 20/51 (39.22%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 1 MPPYEWWRVYGKMGDMKDLARVAMRVLSKVPASAGAERNWSLFGGTHISMQ 153
M P EWW +G G++ +L + A+R++S+ +S+G ERNWS F H +
Sbjct: 53 MSPTEWWFQFG--GEVPNLQKCALRIVSQCVSSSGCERNWSAFALVHTKQR 101
BLAST of mRNA_H-elongata_contig90202.16508.1 vs. uniprot
Match: UPI001D034A95 (uncharacterized protein LOC123072353 n=3 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D034A95) HSP 1 Score: 48.1 bits (113), Expect = 5.340e-5 Identity = 20/51 (39.22%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 1 MPPYEWWRVYGKMGDMKDLARVAMRVLSKVPASAGAERNWSLFGGTHISMQ 153
M P EWW +G G++ +L + A+R++S+ +S+G ERNWS F H +
Sbjct: 242 MSPTEWWFQFG--GEVPNLQKCALRIVSQCVSSSGCERNWSAFALVHTKQR 290
BLAST of mRNA_H-elongata_contig90202.16508.1 vs. uniprot
Match: UPI0018911F24 (uncharacterized protein LOC119334134 n=1 Tax=Triticum dicoccoides TaxID=85692 RepID=UPI0018911F24) HSP 1 Score: 48.1 bits (113), Expect = 5.380e-5 Identity = 20/51 (39.22%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 1 MPPYEWWRVYGKMGDMKDLARVAMRVLSKVPASAGAERNWSLFGGTHISMQ 153
M P EWW +G G++ +L + A+R++S+ +S+G ERNWS F H +
Sbjct: 690 MSPTEWWFQFG--GEVPNLQKCALRIVSQCVSSSGCERNWSAFALVHTKQR 738
BLAST of mRNA_H-elongata_contig90202.16508.1 vs. uniprot
Match: UPI001D1A5494 (uncharacterized protein LOC123426373 n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=UPI001D1A5494) HSP 1 Score: 47.8 bits (112), Expect = 7.230e-5 Identity = 20/51 (39.22%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 1 MPPYEWWRVYGKMGDMKDLARVAMRVLSKVPASAGAERNWSLFGGTHISMQ 153
M P EWW +G GD+ +L + A+R++S+ +S+G ERNWS + H +
Sbjct: 90 MSPTEWWFQFG--GDVPNLQKYALRIVSQCVSSSGCERNWSAWALVHTKQR 138
BLAST of mRNA_H-elongata_contig90202.16508.1 vs. uniprot
Match: UPI00162D0581 (uncharacterized protein LOC123396332 n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=UPI00162D0581) HSP 1 Score: 47.8 bits (112), Expect = 7.300e-5 Identity = 20/51 (39.22%), Postives = 32/51 (62.75%), Query Frame = 1
Query: 1 MPPYEWWRVYGKMGDMKDLARVAMRVLSKVPASAGAERNWSLFGGTHISMQ 153
M P EWW +G GD+ +L + A+R++S+ +S+G ERNWS + H +
Sbjct: 214 MSPTEWWFQFG--GDVPNLQKYALRIVSQCVSSSGCERNWSAWALVHTKQR 262 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig90202.16508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig90202.16508.1 >prot_H-elongata_contig90202.16508.1 ID=prot_H-elongata_contig90202.16508.1|Name=mRNA_H-elongata_contig90202.16508.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=52bp MPPYEWWRVYGKMGDMKDLARVAMRVLSKVPASAGAERNWSLFGGTHISMback to top mRNA from alignment at H-elongata_contig90202:2288..2443+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig90202.16508.1 ID=mRNA_H-elongata_contig90202.16508.1|Name=mRNA_H-elongata_contig90202.16508.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=156bp|location=Sequence derived from alignment at H-elongata_contig90202:2288..2443+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig90202:2288..2443+ >mRNA_H-elongata_contig90202.16508.1 ID=mRNA_H-elongata_contig90202.16508.1|Name=mRNA_H-elongata_contig90202.16508.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=312bp|location=Sequence derived from alignment at H-elongata_contig90202:2288..2443+ (Himanthalia elongata Himel1 dioecious)back to top |