mRNA_H-elongata_contig9005.16495.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig9005.16495.1
Unique NamemRNA_H-elongata_contig9005.16495.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig9005.16495.1 vs. uniprot
Match: A0A6H5K8T1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8T1_9PHAE)

HSP 1 Score: 168 bits (426), Expect = 2.400e-39
Identity = 147/510 (28.82%), Postives = 232/510 (45.49%), Query Frame = 3 
Query:   27 WLVTLYLRAPHSTVLLCGTHKDKCMPSNILTKLLAWFRRSHSIETILKDVEHLIIKKNEQWENEQS-KNKQSSSVKGPKLACGIQLISSSPACYYENGLADLQERLKTCGEGTRWLIPPSWRLALVVLDAVRDGVKPIDAARRHMNIKDPLP---VESKKKRSWVPLEELQLHWTDVLNILKHDLPTELIPDDPKFALQSVMDMRERGGSLLKHP--EVVFLDVESFALSLAPILNHKTQQRGGEGTCIFAERKLEEAWQYDAKEQLVSKGILETRFAVFLWGNDSGDLPHQT-------FDVLVKLGVLLPLPLRIHTPVDHCFLDQAWENMTS-CRNVKEFMVLMRLPQNAPCETLARFNAF-NKLREDWGVVAEWEFSLGRTPHGLVERLIASCHYIGNVVRNTCWRRGACFVAHQKAINLAGGSFALSLQFTQSSTSNLRTVGTLVVKAFGNRKGRAVWGALRFVISTVWSLFQEFPGLSWQARMMCPKHEGRIIHYLAGPKDIKV 1511
            WL  LYLRAP STV+L     +KC  S  + K       + + E I + V  L+      W   +  + +    V    L  G+  +S       E         L +    T   +PP+W LAL V+ A+R    PI AAR  + + +PLP   V      +++  +EL   W  V++ L+ D+P  +I  + + AL+  + + +  G  L+    + +FLDV   +  L+PIL+HK + +             E  W +  ++ L   GIL   FA+ +W    G++  ++       F VL+KLGV LP+  R  T + H   D++     S      + +V+MRL +         F+   +K+  D  V  +WEF     P+GL+ERLIASCH +G V    CWR GA F +H   +    G      +   S TS   +      K FG      VW A+R+V S + +L +E+PG+ W   + C KH  + + Y+A   + +V
Sbjct:  173 WLYYLYLRAPGSTVVLVA---NKCDGS--IDKF------AETAERIQRRVRELVAV----WHEARGLRGRSKGHVTDLTLLPGMSRVSCQEKGSPEASGLPALIALISRQAATAIHVPPAWDLALEVIGALRASCNPIAAARDKLGLPNPLPADGVADVHAFAFISKDELSRKWRSVVDNLRDDVPAAMI-SNWESALEGALWISDFAGHTLRVDGGDGIFLDVLWLSKCLSPILSHKLKNQ-----------PFENRWLW-MRDDLAGDGILRREFALHIWRESVGEVVMESEEVAEALFSVLIKLGVALPMGRR--TLLAHS--DRSTPTAPSDVSGSNDMLVIMRLSETCNEHQRTLFDGLASKMPRD-RVTLKWEFDKAGPPYGLIERLIASCHVLGEVETGACWRYGAVFQSHD--MRFVEGRNVRFYKIALSMTSYNESERVFTAKVFGPLDSERVWVAIRYVASAMINLSKEWPGVLWTGWLDCEKHPSQHL-YMASSVEARV 646
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BLAST of mRNA_H-elongata_contig9005.16495.1 vs. uniprot
Match: D7FVX5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVX5_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 7.890e-34
Identity = 146/519 (28.13%), Postives = 237/519 (45.66%), Query Frame = 3 
Query:   12 EHLHEWLVTLYLRAPHSTVLLCGTHKDKCMPSNILTKLLAWFRRSHSIETILKDVEHLIIKKNEQWENEQSKNKQSSSVKGPKLACGIQLISSSPACYYENGLADLQERLKTCGEGTRWLIPPSWRLALVVLDAVRDGVKPIDAARRHMNIKDPLPVESKKKRSWVPLEELQLHWTDVLNILKHDL--PTE-LIPDDPKFALQSVMDMRERGGSLLK--HPEVVFLDVESFALSLAPILNHKTQQRGGEGTCIFAERKLEEAWQYDAKEQLVSKGILETRFAVFLWGNDSGDLPHQTF-----DVLVKLGVLLPLPLRI-HTPVDHCFLDQAWENMTSCRNVKEFMVLMRLP----QNAPCETLARFNAFNKLREDWGVVAEWEFSLGRTPHGLVERLIASCHYIGNVVRNTCWRRGACFVAHQKAINLAGGS---FALSLQFTQSSTSNLRTVGTLVVKAFGNRKGRAVWGALRFVISTVWSLFQEFPGLSWQARMMCPKH-EGRIIHYLAGPKDIKV 1511
            E + +WL  L+LR P S VLL     D  +   + T        + ++E+  +       ++ ++W+     N++S  V    +     L+S    C    GL+++  R+   G  T  ++PPSW LAL  LDA+RD   P  A RR +++     V + +  S++    L   W D +  +  +L  P E +   D   A++  + + E  G +L+  H +V+FLDV   + +L PIL+HK +         F   +L        K++LV  G+L  +FA +LW  +    P +        VL  LGV LPL     HT      +D A  +    R  ++ +V+MRLP    +N   E        ++      V  +W F      HGLVER+IASCH +G+V    CWR GA F ++ +A +  GG    ++  +++ +   S  R    L V  FG      +W ALR+V S+V +    +PG+ W+    C  H  GR+  Y   P + ++
Sbjct:  485 EDIMKWLYALHLRVPGSAVLLVANKCDGSLQEFVGT--------AGAVESSAR-------RQLQEWQG----NRKSPGVTKLTILQQPSLVS----CDDGGGLSEVIARVDAQG-ATSIVVPPSWGLALAFLDALRDSRDPEPATRRFLHLDFDAEVGAAQGSSFMTESTLFQRWNDTVKSVAGELTSPAERMAVSDHHGAMEGALWISEFAGHILRVAHSDVIFLDVVWLSAALKPILSHKLESH------FFPRSELTAM-----KDELVDNGVLRLKFAEYLWDLEMEAPPSEEVMDALCGVLHSLGVALPLGREERHTA---SAIDPAAAHGQIGR--QDMLVIMRLPDTCEENIQGELQELVRDLSERHGGNEVTLKWRFDGAGASHGLVERVIASCHEVGSVRSGLCWRYGAVFQSYARADD--GGLNWLYSFVIRYDEEVGSGERV---LAVTMFGPTAEDRLWAALRWVASSVVNTSTGWPGVRWEGGPACAIHARGRM--YFKTPIEARI 956
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BLAST of mRNA_H-elongata_contig9005.16495.1 vs. uniprot
Match: A0A6H5JME6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JME6_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 3.300e-15
Identity = 98/393 (24.94%), Postives = 155/393 (39.44%), Query Frame = 3 
Query:  357 GTRWLIPPSWRLALVVLDAV---------------RDGVKPIDAARRHMNIKDPLPVESKKKRSWVPLEELQLHWTDVLNILKHDLPTELIPDDPKFAL-QSVMDMRERGGSLLKHPEVVFLDVESFALSLAPILNHKTQQR-------GGEGTCIFAERKLEEAWQYDAKEQLVSKGILETRFAVFLWGNDSGDLPHQTFDVLVKLGVLLPLPLRIHTPVDHCFLDQAWENMTSCRNVKEFMVLMRLPQNAPCETLARFNAFNKLREDWGVVAEWEFSLGRTPHGLVERLIASCHYIGNVVRNTCWRRGACFVAHQKAINLAGGSFALSLQFTQSSTSNLRTVGTLVVKAFGNRKGRAVWGALRFVISTVWSLFQEFPGLSWQARMMCPKHE 1466
            G   ++P SW +ALVVLDA+               R G +     R      DP    ++      P+ E++   +       +         +P+  L +  ++  +  GSL++H   VFLDV   A  L P+LNH+  +        G  G  +    K + +WQ     +    G+L+   A  LW    GDL       L  LG+   L  R                          +VL+RL +  P       + F +  E    V  W+ S+G  P G VE+++  C  IG +   T WR G     +   +  AG +FA+ ++++   +        + +K +GN    A W AL   IS V  +   FPGL W A + CP+H+
Sbjct:  615 GAALVLPRSWNIALVVLDALGNGRQGSRRFGARDGRRGGRATGTRRGDCREIDPAARWNRGYNMGRPIREMERRRSSSEGRRSNS-------HEPRPRLGRGALNQAQYEGSLVRHETYVFLDVTWLAKILKPLLNHREDEDFFGSLSLGDTGITLDG-HKDKVSWQ-----RFKQTGVLKPELAGLLW---PGDLCDYVLRTLESLGLAHQLDDRF---------------------AGGLVVLLRLGKERPASVGKELDDFRRDHEAIFSVT-WKISMG-VPPGAVEKVLTRCCSIGEL--RTFWRFGVLVQGNMGGVT-AGKTFAMLVEYSHKGSE-------IDIKVYGNIATTAPWAALSLGISAVRVMCSAFPGLRWCASLKCPEHK 958
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig9005.16495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K8T1_9PHAE2.400e-3928.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVX5_ECTSI7.890e-3428.13LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
A0A6H5JME6_9PHAE3.300e-1524.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig9005contigH-elongata_contig9005:2209..5633 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score152.5
Seed ortholog evalue5.2e-34
Seed eggNOG ortholog2880.D7FVX5
Preferred nameSLITRK2
GOsGO:0000902,GO:0000904,GO:0005575,GO:0005623,GO:0005886,GO:0007275,GO:0007399,GO:0007409,GO:0008150,GO:0009653,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0031175,GO:0031224,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0044087,GO:0044089,GO:0044425,GO:0044464,GO:0048468,GO:0048518,GO:0048522,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0051963,GO:0051965,GO:0061564,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0120036,GO:0120039,GO:2000026
EggNOG free text desc.positive regulation of synapse assembly
EggNOG OGs2CMPC@1,2QR6C@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size3023
Cds size1518
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig9005.16495.1prot_H-elongata_contig9005.16495.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig9005 2307..4226 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931300.7439244-UTR-H-elongata_contig9005:2208..23061622931300.7439244-UTR-H-elongata_contig9005:2208..2306Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9005 2209..2306 +
1691679779.7661068-UTR-H-elongata_contig9005:2208..23061691679779.7661068-UTR-H-elongata_contig9005:2208..2306Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9005 2209..2306 +
1622931300.7866282-UTR-H-elongata_contig9005:4226..56331622931300.7866282-UTR-H-elongata_contig9005:4226..5633Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9005 4227..5633 +
1691679779.8009892-UTR-H-elongata_contig9005:4226..56331691679779.8009892-UTR-H-elongata_contig9005:4226..5633Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig9005 4227..5633 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931300.7601175-CDS-H-elongata_contig9005:2306..28361622931300.7601175-CDS-H-elongata_contig9005:2306..2836Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9005 2307..2836 +
1691679779.778811-CDS-H-elongata_contig9005:2306..28361691679779.778811-CDS-H-elongata_contig9005:2306..2836Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9005 2307..2836 +
1622931300.7734208-CDS-H-elongata_contig9005:3238..42261622931300.7734208-CDS-H-elongata_contig9005:3238..4226Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9005 3239..4226 +
1691679779.7888312-CDS-H-elongata_contig9005:3238..42261691679779.7888312-CDS-H-elongata_contig9005:3238..4226Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig9005 3239..4226 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig9005.16495.1

>prot_H-elongata_contig9005.16495.1 ID=prot_H-elongata_contig9005.16495.1|Name=mRNA_H-elongata_contig9005.16495.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=506bp
MPSNILTKLLAWFRRSHSIETILKDVEHLIIKKNEQWENEQSKNKQSSSV
KGPKLACGIQLISSSPACYYENGLADLQERLKTCGEGTRWLIPPSWRLAL
VVLDAVRDGVKPIDAARRHMNIKDPLPVESKKKRSWVPLEELQLHWTDVL
NILKHDLPTELIPDDPKFALQSVMDMRERGGSLLKHPEVVFLDVESFALS
LAPILNHKTQQRGGEGTCIFAERKLEEAWQYDAKEQLVSKGILETRFAVF
LWGNDSGDLPHQTFDVLVKLGVLLPLPLRIHTPVDHCFLDQAWENMTSCR
NVKEFMVLMRLPQNAPCETLARFNAFNKLREDWGVVAEWEFSLGRTPHGL
VERLIASCHYIGNVVRNTCWRRGACFVAHQKAINLAGGSFALSLQFTQSS
TSNLRTVGTLVVKAFGNRKGRAVWGALRFVISTVWSLFQEFPGLSWQARM
MCPKHEGRIIHYLAGPKDIKVSVTASLFVLEILRSLFDTLSSGRPVRETF
RNIFR*
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mRNA from alignment at H-elongata_contig9005:2209..5633+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig9005.16495.1 ID=mRNA_H-elongata_contig9005.16495.1|Name=mRNA_H-elongata_contig9005.16495.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3425bp|location=Sequence derived from alignment at H-elongata_contig9005:2209..5633+ (Himanthalia elongata Himel1 dioecious)
AGGAGCTTGTGGAACACCTGCACGAGTGGCTGGTAACGCTGTACCTAAGG
GCTCCTCACTCTACCGTGCTCCTTTGCGGTACACACAAAGATAAATGTAT
GCCAAGCAATATTCTGACCAAATTACTCGCGTGGTTCAGACGATCTCACT
CGATTGAAACGATCCTGAAGGATGTTGAGCATTTAATAATAAAGAAGAAC
GAGCAGTGGGAGAACGAGCAATCAAAAAACAAACAGTCATCATCCGTGAA
AGGTCCGAAGCTGGCGTGTGGGATTCAGCTTATTAGTTCGTCTCCGGCTT
GTTACTATGAGAATGGCTTGGCCGATCTCCAGGAGCGACTGAAAACATGT
GGAGAGGGTACGCGGTGGTTGATCCCGCCATCGTGGCGTCTGGCTCTAGT
GGTGCTGGATGCCGTCCGTGATGGAGTCAAACCAATAGACGCTGCTCGAC
GCCACATGAACATCAAGGACCCGCTTCCAGTCGAATCTAAGAAAAAACGC
AGTTGGGTGCCATTGGAGGAGCTTCAACTACACTGGACAGACGTTCTTAA
TATCCTCAAGCATGATCTTCCGACAGAGCTCATACCCGACGACCCCAAGT
TTGCATTACAAAGCGTTATGGACATGAGGTAAGAGGCTACTGTAGCTGTG
ATGGTGCGTGTTTTTGTGTTAAGACACTGTATCTAGCCACGCACCCGTAA
AATTAGACAAGGTGGTTTCCCACATGCTGCACTTAATATTAAGCATCCTT
CTTCCCGAGCCTGATGCACAGCCGTGGTTTATAACTCCGACCATCCTCTG
GTCCCCCCTGAACGCTTTAAATTAACTGACTTCAAGACGGGCTGATATGA
TGGGTAGGTGGTTACCTGCGAGTCACGAAGTGAGGTTTTCTGTGACATAT
TAAAAAAATGGACGAGATGGTGACAATCAACAGTGCCTCTAAACAGTTTG
TTTCTGCGCCGGTGTAATATTTTTTAGTTTACTCAATATATTGTGTCTCG
CTATTTGTTGATTGTTTGTCATCCCATCAGAGAACGCGGCGGATCGCTTC
TGAAACACCCCGAAGTGGTGTTCTTGGATGTGGAATCTTTCGCGCTTTCT
CTTGCCCCTATCCTCAACCACAAGACGCAACAAAGGGGAGGTGAAGGAAC
GTGTATATTCGCTGAACGGAAGCTCGAGGAAGCGTGGCAGTATGACGCTA
AGGAGCAGCTCGTGAGCAAGGGAATACTTGAAACACGCTTCGCCGTTTTT
TTGTGGGGCAACGACTCTGGTGACTTGCCACACCAAACGTTTGACGTGCT
TGTGAAGCTCGGGGTTCTCCTCCCATTGCCACTAAGGATTCATACACCAG
TCGACCATTGCTTTCTAGATCAAGCTTGGGAGAATATGACATCTTGCCGG
AACGTCAAAGAATTCATGGTATTGATGCGACTACCACAGAACGCCCCATG
TGAAACCTTGGCCCGCTTTAATGCATTCAACAAGCTTCGAGAAGACTGGG
GGGTGGTGGCGGAGTGGGAGTTTAGCCTCGGACGAACGCCCCATGGTCTG
GTGGAACGACTCATTGCATCCTGCCACTACATCGGGAACGTGGTGAGGAA
CACTTGCTGGAGGAGAGGTGCTTGCTTCGTTGCTCACCAAAAGGCCATCA
ACCTGGCAGGTGGCTCTTTTGCCCTGTCGCTACAATTCACCCAAAGTTCC
ACGTCAAATCTAAGGACAGTGGGAACTCTGGTTGTTAAGGCTTTCGGAAA
CAGAAAGGGCCGTGCAGTGTGGGGCGCTCTTCGCTTCGTAATCTCTACTG
TGTGGAGTCTTTTTCAAGAGTTCCCGGGGCTTTCTTGGCAAGCCCGGATG
ATGTGTCCAAAGCACGAGGGGAGAATAATACACTACCTTGCTGGTCCCAA
AGATATCAAGGTCAGTGTCACAGCTTCGTTGTTTGTACTTGAGATCTTGC
GATCGCTGTTCGACACACTTTCGAGCGGTAGGCCGGTGCGCGAAACATTT
CGGAACATCTTTCGGTAGACTTTATTCGATATATACACTTCACAACCGCA
ACTTCGGTGTTAGTGGTCGCATTTATAATCTAATTCGTGGTTCATCTAAA
ACACTTGCTATCTCAGGGAAGATCTCCAGGTGATCCGATTATACGGCCAG
ATGCCATCCAGCAATGTGGATGTCAGCAAGAGGTGGCATCACGCTTGCGC
ACAGTGCTGCCGCCTTCGTCTACGTTGGGTAAGCGAGAAGGGCGCGCTAA
AAGAAGCAGTGACAAAGAACTGAAGACGTTATCTACAATTTTAGGTATGC
CATGGTGATTAAATTTCTTTTTTAGGTTTCGCAGTTTGAATTCTAACATC
GACCAGAAGGTCACCATCAACATTTGTCTCTAGGACTTGCCGTTATATCC
TTAGACGATGGCGTTACCTGTTGTGGCTGAATTCCCAATGGCGTGTTCAG
TTTTCGCGTCACCTTTGACTTACTGTTCTTCTTCTTAAGAGGAATTTGTT
TTGTTTTTTTGCGTATCCTCTGTTGGGCAGATGATGACCGCTTGCCCGAT
TTACACGTGTGTGAAACGCCCTTATCGTTCGTCCGTTTCCTGTAGAAAAA
ATGTTCATTGCTGAAAGCGTAGAACAGTGTCATGGAAGCATCAATGAAGA
CGGAGAGGAACGGTTCACGGCGGCACTTGATAATGCGATGACCGTTACAA
CAGTGAGAGTGTGTACGGTGGATATTTTCGATCTTACAGTGGCAAGCCCG
TAAAGCTAGGGTTGGGCAAAATTAGTGCCGCGACCGTAGGAACAGAACCA
GCCGTCAAATTATATGGTTCTTGCTCCATGTATTTGCCTCCGTAACGAGG
AAGCCGTCTGTACCGGAGGCAGCACGCCTAGTTAGGAGTGATCCGAAAGT
GTGCTCACCGTCGTGAACTGGCATGTACACTGGCCAATCTTACCGTGGTA
ATCATATATTATCTTACACGTAACTAGTTGTCACAAAGTGCCCTCAATCC
TCTGGAATATAGGTTCCGAAGTGTAGTGGGTTTACTGCGCACGTGATGTC
ACCTGATATCACCTAATGTTACTATATTTAGGCCCTCGTTCGCCCACCAC
CTTAAACACACACCTTTTAACACGAGTAAGTCTCAGCGGTGTCATTGGTC
TGCCACATTTCCCCCGCATGTCTCTTGTATTTTAGTTCGAAGAAACTCTC
GATAGCCGTTAATCCAGCGGATAACGTCGCTGTTTCATGTACCAAGTCTT
TTCTTCTGTACTATTGAGAATGATCACCGATCTTTCATTCTGTTATCATG
ACCATACTTGATGCTTATCTTCTCGTTCGTGTCTTCGACCTCGTAGGGAA
AATATCCGATCGTGGACGAAGAAACGGAGATCGGGGGATGGAGGACGCCT
GAGTGGGTAAAAGATGCTGTTCTGG
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Coding sequence (CDS) from alignment at H-elongata_contig9005:2209..5633+

>mRNA_H-elongata_contig9005.16495.1 ID=mRNA_H-elongata_contig9005.16495.1|Name=mRNA_H-elongata_contig9005.16495.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3036bp|location=Sequence derived from alignment at H-elongata_contig9005:2209..5633+ (Himanthalia elongata Himel1 dioecious)
ATGCCAAGCAATATTCTGACCAAATTACTCGCGTGGTTCAGACGATCTCA
CTCGATTGAAACGATCCTGAAGGATGTTGAGCATTTAATAATAAAGAAGA
ACGAGCAGTGGGAGAACGAGCAATCAAAAAACAAACAGTCATCATCCGTG
AAAGGTCCGAAGCTGGCGTGTGGGATTCAGCTTATTAGTTCGTCTCCGGC
TTGTTACTATGAGAATGGCTTGGCCGATCTCCAGGAGCGACTGAAAACAT
GTGGAGAGGGTACGCGGTGGTTGATCCCGCCATCGTGGCGTCTGGCTCTA
GTGGTGCTGGATGCCGTCCGTGATGGAGTCAAACCAATAGACGCTGCTCG
ACGCCACATGAACATCAAGGACCCGCTTCCAGTCGAATCTAAGAAAAAAC
GCAGTTGGGTGCCATTGGAGGAGCTTCAACTACACTGGACAGACGTTCTT
AATATCCTCAAGCATGATCTTCCGACAGAGCTCATACCCGACGACCCCAA
GTTTGCATTACAAAGCGTTATGGACATGAGATGCCAAGCAATATTCTGAC
CAAATTACTCGCGTGGTTCAGACGATCTCACTCGATTGAAACGATCCTGA
AGGATGTTGAGCATTTAATAATAAAGAAGAACGAGCAGTGGGAGAACGAG
CAATCAAAAAACAAACAGTCATCATCCGTGAAAGGTCCGAAGCTGGCGTG
TGGGATTCAGCTTATTAGTTCGTCTCCGGCTTGTTACTATGAGAATGGCT
TGGCCGATCTCCAGGAGCGACTGAAAACATGTGGAGAGGGTACGCGGTGG
TTGATCCCGCCATCGTGGCGTCTGGCTCTAGTGGTGCTGGATGCCGTCCG
TGATGGAGTCAAACCAATAGACGCTGCTCGACGCCACATGAACATCAAGG
ACCCGCTTCCAGTCGAATCTAAGAAAAAACGCAGTTGGGTGCCATTGGAG
GAGCTTCAACTACACTGGACAGACGTTCTTAATATCCTCAAGCATGATCT
TCCGACAGAGCTCATACCCGACGACCCCAAGTTTGCATTACAAAGCGTTA
TGGACATGAGAGAACGCGGCGGATCGCTTCTGAAACACCCCGAAGTGGTG
TTCTTGGATGTGGAATCTTTCGCGCTTTCTCTTGCCCCTATCCTCAACCA
CAAGACGCAACAAAGGGGAGGTGAAGGAACGTGTATATTCGCTGAACGGA
AGCTCGAGGAAGCGTGGCAGTATGACGCTAAGGAGCAGCTCGTGAGCAAG
GGAATACTTGAAACACGCTTCGCCGTTTTTTTGTGGGGCAACGACTCTGG
TGACTTGCCACACCAAACGTTTGACGTGCTTGTGAAGCTCGGGGTTCTCC
TCCCATTGCCACTAAGGATTCATACACCAGTCGACCATTGCTTTCTAGAT
CAAGCTTGGGAGAATATGACATCTTGCCGGAACGTCAAAGAATTCATGGT
ATTGATGCGACTACCACAGAACGCCCCATGTGAAACCTTGGCCCGCTTTA
ATGCATTCAACAAGCTTCGAGAAGACTGGGGGGTGGTGGCGGAGTGGGAG
TTTAGCCTCGGACGAACGCCCCATGGTCTGGTGGAACGACTCATTGCATC
CTGCCACTACATCGGGAACGTGGTGAGGAACACTTGCTGGAGGAGAGGTG
CTTGCTTCGTTGCTCACCAAAAGGCCATCAACCTGGCAGGTGGCTCTTTT
GCCCTGTCGCTACAATTCACCCAAAGTTCCACGTCAAATCTAAGGACAGT
GGGAACTCTGGTTGTTAAGGCTTTCGGAAACAGAAAGGGCCGTGCAGTGT
GGGGCGCTCTTCGCTTCGTAATCTCTACTGTGTGGAGTCTTTTTCAAGAG
TTCCCGGGGCTTTCTTGGCAAGCCCGGATGATGTGTCCAAAGCACGAGGG
GAGAATAATACACTACCTTGCTGGTCCCAAAGATATCAAGGTCAGTGTCA
CAGCTTCGTTGTTTGTACTTGAGATCTTGCGATCGCTGTTCGACACACTT
TCGAGCGGTAGGCCGGTGCGCGAAACATTTCGGAACATCTTTCGGTAGAG
AACGCGGCGGATCGCTTCTGAAACACCCCGAAGTGGTGTTCTTGGATGTG
GAATCTTTCGCGCTTTCTCTTGCCCCTATCCTCAACCACAAGACGCAACA
AAGGGGAGGTGAAGGAACGTGTATATTCGCTGAACGGAAGCTCGAGGAAG
CGTGGCAGTATGACGCTAAGGAGCAGCTCGTGAGCAAGGGAATACTTGAA
ACACGCTTCGCCGTTTTTTTGTGGGGCAACGACTCTGGTGACTTGCCACA
CCAAACGTTTGACGTGCTTGTGAAGCTCGGGGTTCTCCTCCCATTGCCAC
TAAGGATTCATACACCAGTCGACCATTGCTTTCTAGATCAAGCTTGGGAG
AATATGACATCTTGCCGGAACGTCAAAGAATTCATGGTATTGATGCGACT
ACCACAGAACGCCCCATGTGAAACCTTGGCCCGCTTTAATGCATTCAACA
AGCTTCGAGAAGACTGGGGGGTGGTGGCGGAGTGGGAGTTTAGCCTCGGA
CGAACGCCCCATGGTCTGGTGGAACGACTCATTGCATCCTGCCACTACAT
CGGGAACGTGGTGAGGAACACTTGCTGGAGGAGAGGTGCTTGCTTCGTTG
CTCACCAAAAGGCCATCAACCTGGCAGGTGGCTCTTTTGCCCTGTCGCTA
CAATTCACCCAAAGTTCCACGTCAAATCTAAGGACAGTGGGAACTCTGGT
TGTTAAGGCTTTCGGAAACAGAAAGGGCCGTGCAGTGTGGGGCGCTCTTC
GCTTCGTAATCTCTACTGTGTGGAGTCTTTTTCAAGAGTTCCCGGGGCTT
TCTTGGCAAGCCCGGATGATGTGTCCAAAGCACGAGGGGAGAATAATACA
CTACCTTGCTGGTCCCAAAGATATCAAGGTCAGTGTCACAGCTTCGTTGT
TTGTACTTGAGATCTTGCGATCGCTGTTCGACACACTTTCGAGCGGTAGG
CCGGTGCGCGAAACATTTCGGAACATCTTTCGGTAG
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