mRNA_H-elongata_contig8967.16465.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Match: D8LJY8_ECTSI (Threonine dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJY8_ECTSI) HSP 1 Score: 619 bits (1596), Expect = 2.050e-218 Identity = 313/371 (84.37%), Postives = 336/371 (90.57%), Query Frame = 1
Query: 1 LIPPFDDPEVIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGLTLSMKAGQVIQLPSVGLFADGAAVRTTGAETFRVAREYVDGMMTVNTDEICQAYGGMAIKLGFNDTRCVMEPAGALAIAGMRKYLKEKGLVGHSVVAICSGANMDFDRLRFVSERADSSETLLSVTIPERPGAFQAGEFYSVVFPRNVTEFSYRYYNLSRADIIISFQAKPGIARHDDALTVIQDLRARGISVMDLSSNELAKAHARHMVGGRAPNVENELLYRFEFPESPGALSSFLAALSGGWNVSLFHYRNHGNDFGRVLAGLQVPPEESAEFQEFLRELGYTYYDESRNPVYEQFFK 1113
LI PFDDPEVIAGQGTIGMEILK RNG+ALDIVF C GLVAGVAAYIKQVRPEVKVIGVEPEDAAG+TLS KA QVI LPSVGLFADGAAVRTTGAETFRVAR+YVD MMTV TDEICQA IKLGFNDTRCVMEPAGALAIAGMRKYLK++GLVGHSVVA+CSGANMDFDRLRFVSERADSSETL+S TIPERPGAFQ E YSVVFPRNVTEFSYRY+ SRAD+++SFQA G +R DDALTV++ LR++G+ VMDLSSNELAKAHARHMVGGR+PNV NE+LYRFEFPESPGALS FLAALSGGWNVSLFHYRNHG+DFGRVLAG+QVPP E AEF EFL+ELGYTY+DESRNPVY QFFK
Sbjct: 229 LIHPFDDPEVIAGQGTIGMEILKERNGRALDIVFCCXXXXGLVAGVAAYIKQVRPEVKVIGVEPEDAAGMTLSTKADQVITLPSVGLFADGAAVRTTGAETFRVARDYVDSMMTVTTDEICQA-----IKLGFNDTRCVMEPAGALAIAGMRKYLKDQGLVGHSVVAVCSGANMDFDRLRFVSERADSSETLISATIPERPGAFQ--ELYSVVFPRNVTEFSYRYHTSSRADMMVSFQALEGTSRKDDALTVVEGLRSKGMEVMDLSSNELAKAHARHMVGGRSPNVMNEVLYRFEFPESPGALSRFLAALSGGWNVSLFHYRNHGSDFGRVLAGIQVPPGEMAEFHEFLKELGYTYHDESRNPVYSQFFK 592
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Match: A0A835ZD82_9STRA (Threonine dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD82_9STRA) HSP 1 Score: 488 bits (1255), Expect = 1.790e-166 Identity = 259/405 (63.95%), Postives = 299/405 (73.83%), Query Frame = 1
Query: 1 LIPPFDDPE----------VIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGLTLSMKAGQVIQLPSVGLFADGAAVRTTGAETFRVAREYVDGMMTVNTDEICQAYGGMAIKLGFNDTRCVMEPAGALAIAGMRKYLKEKGLVGHSVVAICSGANMDFDRLRFVSERADSSETLLSVTIPERPG----------------------AFQAGEFYSVVFPRNVTEFSYRYYNLSRADIIISFQAKPGIARHDDALTVIQDLRARGISVMDLSSNELAKAHARHMVGGRAPNVENELLYRFEFPESPGALSSFLAALSGGWNVSLFHYRNHGNDFGRVLAGLQVPPEESAEFQEFLRELGYTYYDESRNPVYEQFFKGS 1119
L+ PFDDPE VIAGQGT+ EILKARNG+ LDI+FAC GGGGLVAG+AAY+K VRPEV+V+GVE DAAG+T S++AG+V+ L VGLFADGAAVR TG+ETFRVA VD M+TV+TDEICQA IK GFNDTRCVMEPAGALAIAG KYLK++GLVG +V A+ SGANMDFDRLRFVSERADSSETL+SVTIPE PG +F+A Y VFPRNVTEFSYRY++ + A +++S+Q+ PG+AR DA V+ L G VMDLS NELAK HARH VGGRA V NE LYRFEFPE+PGALS FL AL WN+SLFHYRNHG+DFGRVL VP + A F +FL ELGY YYDE+RNPVY QFF G+
Sbjct: 215 LVHPFDDPEASTKLQLQLDVIAGQGTVAHEILKARNGKPLDIIFACVGGGGLVAGIAAYVKAVRPEVRVVGVEARDAAGMTASLQAGKVVSLQHVGLFADGAAVRVTGSETFRVASALVDDMITVSTDEICQA-----IKFGFNDTRCVMEPAGALAIAGAAKYLKDQGLVGLTVAAVTSGANMDFDRLRFVSERADSSETLISVTIPESPGICERXXXXXXXXXXXXXXXXXXSFRA--LYRSVFPRNVTEFSYRYHDGAAAQVLLSYQSLPGVARAADAAVVLDSLTGAGYRVMDLSDNELAKDHARHFVGGRAHAVANERLYRFEFPEAPGALSRFLNALQFEWNISLFHYRNHGSDFGRVL----VPAADDAAFGKFLDELGYEYYDETRNPVYTQFFSGA 608
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Match: A0A7S2SP50_9STRA (Threonine dehydratase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP50_9STRA) HSP 1 Score: 469 bits (1208), Expect = 3.900e-160 Identity = 240/374 (64.17%), Postives = 287/374 (76.74%), Query Frame = 1
Query: 1 LIPPFDDPEVIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGLTLSMKAGQVIQLPSVGLFADGAAVRTTGAETFRVAREYVDGMMTVNTDEICQAYGGMAIKLGFNDTRCVMEPAGALAIAGMRKYLKEKGLVGHSVVAICSGANMDFDRLRFVSERADSSETLLSVTIPERPGAFQAGEFYSVVFPRNVTEFSYRYYNLSRADIIISFQAKP-GIARHDDALTVIQDLRARGISVMDLSSNELAKAHARHMVGGRAPN--VENELLYRFEFPESPGALSSFLAALSGGWNVSLFHYRNHGNDFGRVLAGLQVPPEESAEFQEFLRELGYTYYDESRNPVYEQFFK 1113
+I PFDDP VIAGQGT+G EILK + LD +F CCGGGG++AGVAAY+K+VRP VKVIGVE EDAAG+T S+ AGQV+ LPSVGLFADGAAVRT G ETFRV + VDGM+TV TDE+C A IK GF DTRCV EPAGAL IAG +KYL++ ++G +VVA+ SGAN+DFDRLRFVSERADS+ETLLSV IPERPGAF+ + YSV+ PRNVTEFSYRY RAD+IISFQAK G + D VIQ+L G V +L ++EL K H RH+ GGR P V NE LYRF+FPE+PGALS FL +L+ GW+VSLFHYR+HG+DFGRVL G+ V P E +F FL+ELGY Y+ E NP+Y+QF +
Sbjct: 190 MIHPFDDPAVIAGQGTVGAEILKQTTSRELDAIFVCCGGGGMLAGVAAYVKRVRPLVKVIGVEAEDAAGMTASLAAGQVVTLPSVGLFADGAAVRTVGQETFRVCSQLVDGMVTVTTDELCAA-----IKNGFEDTRCVFEPAGALGIAGAKKYLQDNHMLGSTVVAVTSGANIDFDRLRFVSERADSTETLLSVRIPERPGAFR--DLYSVIAPRNVTEFSYRYNTAKRADVIISFQAKGNGAEKLRDKQQVIQELEDCGYGVSNLDNDELGKVHLRHLAGGRPPPGAVLNEQLYRFQFPEAPGALSRFLNSLNKGWDVSLFHYRSHGDDFGRVLVGILVSPTEEEQFNSFLQELGYEYHREGDNPLYDQFLR 556
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Match: A0A6B2L2A2_9EUKA (Threonine dehydratase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L2A2_9EUKA) HSP 1 Score: 464 bits (1193), Expect = 1.040e-158 Identity = 229/369 (62.06%), Postives = 285/369 (77.24%), Query Frame = 1
Query: 1 LIPPFDDPEVIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGLTLSMKAGQVIQLPSVGLFADGAAVRTTGAETFRVAREYVDGMMTVNTDEICQAYGGMAIKLGFNDTRCVMEPAGALAIAGMRKYLKEKGLVGHSVVAICSGANMDFDRLRFVSERADSSETLLSVTIPERPGAFQAGEFYSVVFPRNVTEFSYRYYNLSRADIIISFQAKPGIARHDDALTVIQDLRARGISVMDLSSNELAKAHARHMVGGRAPNVENELLYRFEFPESPGALSSFLAALSGGWNVSLFHYRNHGNDFGRVLAGLQVPPEESAEFQEFLRELGYTYYDESRNPVYEQF 1107
+I PFDDP VIAGQGT G+EILK G+ +D +F CCGGGGL+AG+AA IK++RPE+KVIGVE DA G+T S+ AG+V+ LP+VGLFADGAAV+T G ETFR+ ++VD M+ V+TDEIC A IK GFNDTR V+EPAGALAIAG+++Y+ + G+VG S VA SGANMDFDR+RFV++RAD+ ETL+SV IPE PG+F+ + Y +FPRNVTEFSYRY S A I +SF AK +DA V+ LR + V++LS NE+AK HARH+ GGR+PNV+NE+LYRFEFPE PGAL+ FL +S WNVSLFHYRNHG D GRVL GLQ+PPEE +F FL+ LGYTY+DE+ NPVY +F
Sbjct: 138 MIAPFDDPLVIAGQGTCGLEILKQSMGKDIDAIFICCGGGGLLAGIAAIIKRIRPEIKVIGVEAADAPGMTQSLLAGRVVSLPTVGLFADGAAVKTIGRETFRLCSQFVDDMIIVSTDEICAA-----IKDGFNDTRIVLEPAGALAIAGVKRYISKNGIVGKSFVATASGANMDFDRMRFVADRADNRETLISVKIPEVPGSFR--QLYEQIFPRNVTEFSYRYQESSFAHIFLSFHAKNA----EDASKVLDKLREKEYEVIELSDNEMAKVHARHLAGGRSPNVKNEVLYRFEFPEKPGALNLFLQKISSSWNVSLFHYRNHGADVGRVLVGLQIPPEEQQKFDHFLQVLGYTYFDETDNPVYTRF 495
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Match: W7U655_9STRA (Threonine dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U655_9STRA) HSP 1 Score: 466 bits (1198), Expect = 1.190e-158 Identity = 239/372 (64.25%), Postives = 286/372 (76.88%), Query Frame = 1
Query: 1 LIPPFDDPEVIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGLTLSMKAGQVIQLPSVGLFADGAAVRTTGAETFRVAREYVDGMMTVNTDEICQAYGGMAIKLGFNDTRCVMEPAGALAIAGMRKYLKEKGLVGHSVVAICSGANMDFDRLRFVSERADSSETLLSVTIPERPGAFQAGEFYSVVFPRNVTEFSYRYYNLSRADIIISFQAKPGIARHDDALTVIQDLRARGISVMDLSSNELAKAHARHMVGGRAPNVENELLYRFEFPESPGALSSFLAALSGGWNVSLFHYRNHGNDFGRVLAGLQVPPEESAEFQEFLR---ELGYTYYDESRNPVYEQF 1107
+I PFDDP+VIAGQGTIGMEILKA NGQ LD +F C GGGGL++GVAAY+K VRP VKVIGVE EDAAG+T S++AG V+ L VGLFADGAAVR G ETFR+ VD M+TV TDEIC A IK GF DTR VMEPAGALAIAG +KY + G +VVAI SGANMDFDRLRFVSER+DS+ETLLSV I ERPG+F+ + YS +FPRNVTEFSYR+ + AD+IISFQ G +R +D V++++R V+DLS NE+AKAHAR++ GGRAP+V++E LYRFEFPE PGAL +FL L+ GWNVSLFHYRN G D GRVL GLQVPP+E +F ++L +LGY +Y E++NPVY QF
Sbjct: 188 MIHPFDDPDVIAGQGTIGMEILKATNGQPLDAIFVCVGGGGLLSGVAAYVKAVRPSVKVIGVEAEDAAGMTTSLQAGHVVALDRVGLFADGAAVRVVGRETFRLCSHLVDEMVTVTTDEICAA-----IKAGFQDTRSVMEPAGALAIAGAQKYCAAQQWRGKTVVAIASGANMDFDRLRFVSERSDSTETLLSVRINERPGSFR--QLYSGIFPRNVTEFSYRFNSPDTADVIISFQCMAGASREEDKQQVLENIRNLDFEVVDLSGNEMAKAHARYLAGGRAPHVKHEQLYRFEFPERPGALHAFLTDLNKGWNVSLFHYRNQGGDIGRVLVGLQVPPKEVGQFHDWLTTLPQLGYVWYAETKNPVYFQF 552
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Match: A0A7S1D846_CYCTE (Threonine dehydratase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D846_CYCTE) HSP 1 Score: 458 bits (1179), Expect = 2.920e-157 Identity = 234/371 (63.07%), Postives = 284/371 (76.55%), Query Frame = 1
Query: 1 LIPPFDDPEVIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGLTLSMKAGQVIQLPSVGLFADGAAVRTTGAETFRVAREYVDGMMTVNTDEICQAYGGMAIKLGFNDTRCVMEPAGALAIAGMRKYLKEKGLVGHSVVAICSGANMDFDRLRFVSERADSSETLLSVTIPERPGAFQAGEFYSVVFPRNVTEFSYRYYNLSRADIIISFQAKPGIARHDDALTVIQDLRARGISVMDLSSNELAKAHARHMVGGRAPNVENELLYRFEFPESPGALSSFLAALSGGWNVSLFHYRNHGNDFGRVLAGLQVPPEESAEFQEFLRELGYTYYDESRNPVYEQFFK 1113
+I PFDDP VIAGQGTIGMEILK + LD +F CCGGGG++AG+AAY+K+VRP VKVIGVE DAAG+T S+K G+++ L +VGLFADGAAV+T G ETFRV VDGM+TV+TD+IC A IKL +ND R V+EPAGALAIAG++KY+ E L G ++VAI SGANMDFDRLRFVSERAD SE LSVTIPER GAF+ E YS+++PRNVTEFSYRY S A+I+ISFQ P + +D +V+ LR G +DLS+NELAK H RH+ GGR+ V +E L+RF+FPESPGAL FL AL G WNVSLFHYRNHG+DFGRVL G+QVP E+ F +FL+ LGY Y +ES NPVY+ F +
Sbjct: 88 MIHPFDDPFVIAGQGTIGMEILKECVSRPLDAIFVCCGGGGMLAGIAAYVKRVRPTVKVIGVEASDAAGMTASLKEGKIVTLDNVGLFADGAAVKTIGTETFRVCSRLVDGMVTVSTDQICNA-----IKLSYNDARVVLEPAGALAIAGLKKYVAEHNLTGQTMVAITSGANMDFDRLRFVSERADESEQTLSVTIPERAGAFR--ELYSLIWPRNVTEFSYRYETESMANILISFQ--PVMNIENDFNSVMDKLRDNGFPCLDLSNNELAKVHVRHLAGGRSV-VSSERLFRFDFPESPGALQRFLLALEGDWNVSLFHYRNHGDDFGRVLVGIQVPDEDRERFGDFLQSLGYRYVEESHNPVYKTFLR 448
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Match: A0A1Z5JNB5_FISSO (Threonine dehydratase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNB5_FISSO) HSP 1 Score: 449 bits (1156), Expect = 6.230e-152 Identity = 229/369 (62.06%), Postives = 282/369 (76.42%), Query Frame = 1
Query: 4 IPPFDDPEVIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGLTLSMKAGQVIQLPSVGLFADGAAVRTTGAETFRVAREYVDGMMTVNTDEICQAYGGMAIKLGFNDTRCVMEPAGALAIAGMRKYLKEKGLVGHSVVAICSGANMDFDRLRFVSERADSSETLLSVTIPERPGAFQAGEFYSVVFPRNVTEFSYRYYNLSRADIIISFQAKPGIARHDDALTVIQDLRARGISVMDLSSNELAKAHARHMVGGRAPNVENELLYRFEFPESPGALSSFLAALSGGWNVSLFHYRNHGNDFGRVLAGLQVPPE-ESAEFQEFLRELGYTYYDESRNPVYEQF 1107
+ PF+DP VIAGQGTIGMEILK G+ LD +F CCGGGG++AG+AAY+K+VRP VKVIGVE DAAG+T S++AG+V+ LPSVGLFADGAAV+T G ETFRV ++ VD M+TV+TD+IC A IKL +ND R V+EPAGALA+AGMRKY++E + G S+VAI SGANMDFDRLRFVSERAD SE L+VTIPE+PG F+ YS+++PRNVTEFSYRY A I ISFQ I +D V+ +L+ G S +D++ NELAK H RH+ GGR+P VE+E L+RFEFPESPGAL FL +L WNVSLFHYRNHG+DFGRVL G+QVP + A Q FL++LGY Y +E+ NP+Y F
Sbjct: 215 VHPFNDPYVIAGQGTIGMEILKESVGRPLDAIFVCCGGGGMLAGIAAYVKRVRPTVKVIGVEAADAAGMTESLEAGRVVTLPSVGLFADGAAVKTVGDETFRVCQKLVDEMITVDTDQICNA-----IKLTYNDARVVLEPAGALAVAGMRKYIEENEITGQSLVAITSGANMDFDRLRFVSERADGSERTLAVTIPEQPGTFRM--LYSLIWPRNVTEFSYRYEGTGEAHIFISFQPVRNI--ENDFEGVMHNLKENGFSCLDMTHNELAKVHIRHLAGGRSP-VEHERLFRFEFPESPGALQRFLLSLDMAWNVSLFHYRNHGDDFGRVLVGIQVPESSDDANLQSFLKKLGYRYIEETDNPIYRTF 573
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Match: A0A7S0Q5N6_9EUKA (Threonine dehydratase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5N6_9EUKA) HSP 1 Score: 438 bits (1126), Expect = 1.460e-147 Identity = 226/371 (60.92%), Postives = 276/371 (74.39%), Query Frame = 1
Query: 1 LIPPFDDPEVIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGLTLSMKAGQVIQLPSVGLFADGAAVRTTGAETFRVAREYVDGMMTVNTDEICQAYGGMAIKLGFNDTRCVMEPAGALAIAGMRKYLKEKGLVGHSVVAICSGANMDFDRLRFVSERADSSETLLSVTIPERPGAFQAGEFYSVVFPRNVTEFSYRYYNLSRADIIISFQAKPGIARHDDALTVIQDLRARGISVMDLSSNELAKAHARHMVGGRAPNVENELLYRFEFPESPGALSSFLAALSGGWNVSLFHYRNHGNDFGRVLAGLQVPPEESAEFQEFLRELGYTYYDESRNPVYEQFFK 1113
LI PFDDP VIAGQGTIGME+LK G L +F CCGGGG++AG+AAY+K+VRP V VIGVE EDAAG++ S++AG+ L VGLFADGAAV+T G ETFRV VD M+TV+TDEIC A IK F DTRCV+EPAGALAIAG +KY+ + ++V SGANM+FD LR+VSER D+SETLLSVTIPERPGAF+ + + PRN+TEFSYR+++ RA + +S QA+ DD V+ L+ G MDL+SNELAKAHARH+ GGRA NV +EL+YRFEFPE PGAL +FL LS GWNVSLFHYRNHG+D GRVLAG+QVP EE +F+EFL++L Y YY E+ NP + FF+
Sbjct: 209 LIHPFDDPLVIAGQGTIGMEVLKQTTGSPLHAIFVCCGGGGMLAGIAAYVKRVRPGVMVIGVEAEDAAGMSASLRAGRRETLEQVGLFADGAAVKTVGMETFRVCNALVDEMITVSTDEICAA-----IKDAFMDTRCVLEPAGALAIAGAKKYVASTNIRDETLVVTTSGANMNFDTLRYVSERTDASETLLSVTIPERPGAFR--QLIGAIEPRNITEFSYRFHDADRAVVYLSVQARGC----DDKREVVSLLQREGYQPMDLTSNELAKAHARHLAGGRA-NVHSELVYRFEFPERPGALVNFLDTLSAGWNVSLFHYRNHGSDVGRVLAGIQVPLEEHPQFEEFLKKLHYVYYQETDNPAVKNFFR 567
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Match: A0A6S9HDM6_HETAK (Threonine dehydratase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HDM6_HETAK) HSP 1 Score: 431 bits (1109), Expect = 1.110e-144 Identity = 226/373 (60.59%), Postives = 271/373 (72.65%), Query Frame = 1
Query: 1 LIPPFDDPEVIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGLTLSMKAGQVIQLPSVGLFADGAAVRTTGAETFRVAREYVDGMMTVNTDEICQAYGGMAIKLGFNDTRCVMEPAGALAIAGMRKYLKEKGLVGHSVVAICSGANMDFDRLRFVSERADSSETLLSVTIPERPGAFQAGEFYSVVFPRNVTEFSYRYYNLSRAD--IIISFQAKPGIA--RHDDALTVIQDLRARGISVMDLSSNELAKAHARHMVGGRAPNVENELLYRFEFPESPGALSSFLAALSGGWNVSLFHYRNHGNDFGRVLAGLQVPPEESAEFQEFLRELGYTYYDESRNPVYEQF 1107
++ PFDDP VIAGQGTIGMEI+K+ G+ LD VF CCGGGG++AGVAAYIK+VRP+VKVIGVE EDAAG+T S+ AG+V+ LP VGLFADGAAV+T G ETFR+ VD M+TV+TDEICQA IKLGFND+R V+EPAGALAIAG +KY++ L S V SGANMDF+RLRFVSERAD++E L+ VTIPER GAF+ E Y + PR VTEFSYRY +R D +++SFQ+ A R D V++ L G L NELAK H RHM GGRAP++ +E LY F FPE PGAL +FL L G +NVSLFHYRNHG+DFGRVL G VP E+ F EFL ELGY + E+ N Y+QF
Sbjct: 224 MVHPFDDPLVIAGQGTIGMEIVKSMTGRPLDAVFVCCGGGGMLAGVAAYIKRVRPDVKVIGVEAEDAAGMTASLMAGEVVSLPQVGLFADGAAVKTVGRETFRICSRLVDEMVTVSTDEICQA-----IKLGFNDSRTVLEPAGALAIAGCKKYIEINDLERGSFVCTLSGANMDFNRLRFVSERADTTENLICVTIPERKGAFK--ELYECLHPRPVTEFSYRYRPQARGDAVVLLSFQSPANEASERQADVAAVLEKLNTLGWKGESLEDNELAKVHVRHMAGGRAPSLADERLYSFSFPEGPGALKNFLDKLRGQFNVSLFHYRNHGDDFGRVLVGFTVPEEDLEAFGEFLEELGYRHTRETGNTAYQQF 589
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Match: A0A6S8U4Y5_9STRA (Threonine dehydratase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8U4Y5_9STRA) HSP 1 Score: 430 bits (1106), Expect = 1.910e-144 Identity = 224/371 (60.38%), Postives = 272/371 (73.32%), Query Frame = 1
Query: 1 LIPPFDDPEVIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIKQVRPEVKVIGVEPEDAAGLTLSMKAGQVIQLPSVGLFADGAAVRTTGAETFRVAREYVDGMMTVNTDEICQAYGGMAIKLGFNDTRCVMEPAGALAIAGMRKYLKEKGLVGHSVVAICSGANMDFDRLRFVSERADSSETLLSVTIPERPGAFQAGEFYSVVFPRNVTEFSYRYYNLSRADIIISFQAKPGIARHDDALTVIQDLRARGISVMDLSSNELAKAHARHMVGGRAPNVENELLYRFEFPESPGALSSFLAALSGGWNVSLFHYRNHGNDFGRVLAGLQVPPEESAEFQEFLRELGYTYYDESRNPVYEQFFK 1113
+I PFDDP VIAGQGTIGMEILK + LD++F CCGGGG++AG+AAY+K+VRP KVIGVE EDAAG+T S++ G++ L SVGLFADGAAV+T G ETFRV VD MMTV+TD+IC A IKL +ND R ++EPAGALA+AGM+KY++E + G ++VAI SGANMDF RLRFVSERAD SE L V IPERPG F+ E YS+V+PRNVT FSYRY + A I+ISFQ P + +D V++ L MD+S NEL K H RHM GGR+ V E L+RFEFPESPGAL FLA+L WNVSLFHYRNHG+DFGRVL G+QV + Q+FL LGY+Y +E+ N VY+QF K
Sbjct: 213 MIHPFDDPYVIAGQGTIGMEILKDCVSRPLDVIFVCCGGGGMLAGIAAYVKRVRPTTKVIGVEAEDAAGMTASIRNGKITTLDSVGLFADGAAVKTIGTETFRVCNALVDDMMTVSTDQICNA-----IKLTYNDARVILEPAGALAVAGMKKYVEENKITGQTLVAITSGANMDFTRLRFVSERADDSEKTLVVKIPERPGTFR--ELYSLVWPRNVTGFSYRYESEGEAKILISFQ--PVLNVENDFEKVVESLSKHDFECMDVSDNELVKVHVRHMAGGRS-YVPKERLFRFEFPESPGALQRFLASLDMSWNVSLFHYRNHGDDFGRVLVGIQVG-DSCKRMQDFLDNLGYSYSEETANDVYQQFLK 572 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8967.16465.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8967.16465.1 >prot_H-elongata_contig8967.16465.1 ID=prot_H-elongata_contig8967.16465.1|Name=mRNA_H-elongata_contig8967.16465.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=374bp LIPPFDDPEVIAGQGTIGMEILKARNGQALDIVFACCGGGGLVAGVAAYIback to top mRNA from alignment at H-elongata_contig8967:4858..9729- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8967.16465.1 ID=mRNA_H-elongata_contig8967.16465.1|Name=mRNA_H-elongata_contig8967.16465.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4872bp|location=Sequence derived from alignment at H-elongata_contig8967:4858..9729- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8967:4858..9729- >mRNA_H-elongata_contig8967.16465.1 ID=mRNA_H-elongata_contig8967.16465.1|Name=mRNA_H-elongata_contig8967.16465.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2244bp|location=Sequence derived from alignment at H-elongata_contig8967:4858..9729- (Himanthalia elongata Himel1 dioecious)back to top |