mRNA_H-elongata_contig89302.16431.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Match: A0A6H5KCL5_9PHAE (GMC_OxRdtase_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCL5_9PHAE) HSP 1 Score: 321 bits (823), Expect = 4.750e-102 Identity = 180/290 (62.07%), Postives = 216/290 (74.48%), Query Frame = 1
Query: 4 IYQVAPFFLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARAMLGDIIMGKDGRTNLDILHGALVTRVLFEGGRKVRTYRGENRDPTTTTTDLEEEEGSMVQDVPSAIGVEFAVDGKVKKASITKRD----AGSAIVVAAGALHTPKMLMTSGIGDKAELSSNKIDCIAHVPGVGKNLQQDHASVGVMYMLGPDLLKLMPSAYTVVQELERYKIKVLKEINFDFPMAMKEIDEDSDSDPLTNKEENSPSLFSSAGLSAGAFLTSPYAPDPAIGNMSTPDIQV 861
I +VAPFF++SCE AGI +TEDFNKPGGREGAGYY+FA++ GVRDSAARAMLGDI+MG+D RTNLDI+ GA V++VL E + V T ++ D + EG + VP+A GVEF +DGKV++ +I AGSA+VV AGAL TPK+LMTSGIGDKAEL + + CIA+VP +GKNLQ DHASVGVMYMLGPD+LKLMPSAYTV QELERYK+ VLK + FP + DSD LTN E+N+PS+FSSAGLSAGAFL SPY PA N S PDIQ+
Sbjct: 188 IDEVAPFFVDSCEGAGIKLTEDFNKPGGREGAGYYHFAVRDGVRDSAARAMLGDIVMGRDVRTNLDIVTGAHVSKVLIEDAQPVPTESEDDDDTVASRL-----EGKGGRTVPAATGVEFVLDGKVEQVNIAAPGSHGRAGSAVVVTAGALLTPKLLMTSGIGDKAELEGHGLGCIANVPELGKNLQ-DHASVGVMYMLGPDILKLMPSAYTVAQELERYKMGVLKAFDLGFPPGV--TIGGVDSDDLTNGEQNAPSIFSSAGLSAGAFLKSPYESHPAGSNDSAPDIQL 469
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Match: A0A835YLF3_9STRA (Choline dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLF3_9STRA) HSP 1 Score: 174 bits (441), Expect = 6.920e-46 Identity = 114/285 (40.00%), Postives = 149/285 (52.28%), Query Frame = 1
Query: 10 QVAPFFLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARAMLGDIIMGKDGRTNLDILHGALVTRVLFEGGRKVRTYRGENRDPTTTTTDLEEEEGSMVQDVPSAIGVEFAVDGKVKKASITKRDAGSAIVVAAGALHTPKMLMTSGIGDKAELSSNKIDCIAHVPGVGKNLQQDHASVGVMYMLGPDLLKLMPSAYTVVQELERYKIKVLKEINFDFPMAMKEIDEDSDSDPLTNKEENSP-SLFSSAGLSAGAFLTSPYAPDPAIGNMSTPDIQV 861
+VA FF+ESC G+P+ +DFN+PG REGAG Y FAI+ GVRDSAARA+LG II GK R NL IL A V+++L E TT IVV+ GAL TP++LM SGIGD L+ + C+A VPGVG+NLQ DH VG+M+ G LL+ PSAY + ELE+YK+ V++ + DFP + +D +SP LF+S G +AGAFL S + N + PDIQ+
Sbjct: 306 EVAAFFIESCAYLGLPVVDDFNRPGAREGAGLYTFAIREGVRDSAARALLGPIISGKVPRPNLTILSKAEVSQILLEAD----------------TTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVVSGGALMTPRLLMASGIGDARALADAGVACVADVPGVGRNLQ-DHPGVGLMFTAGHTLLERYPSAYKLALELEKYKLNVMRALEIDFPPGVTMAGVIDAADQEGTPVWSSPFGLFASTGQTAGAFLCS------GLSNTTVPDIQL 567
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Match: A0A4D9CPB5_9STRA (GMC_OxRdtase_N domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CPB5_9STRA) HSP 1 Score: 133 bits (334), Expect = 2.470e-31 Identity = 92/219 (42.01%), Postives = 124/219 (56.62%), Query Frame = 1
Query: 10 QVAPFFLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARAMLGDIIMGKDGRTNLDILHGALVTRVLFEGGRKVRTYRGENRDPTTTTTDLEEEEGSMVQDVPSAIGVEFAVDGKVKKASITK---RDAGSA-IVVAAGALHTPKMLMTSGIGDKAELSSNKIDCIAHVPGVGKNLQQDHASVGVMYMLGPDLLKLMPSAYTVVQELERYK 654
QVAP+FLE+C G+PI++DFN P GR GA YY+F IK+GVR SAARA LG I+ D R+NLDI+ A VT VL G E++G V +A GV FA +G + + K R G +V+ AGA+HTPK+LM SG+G + +L I + +PGVG+NLQ DH SV + + L L + +A + +EL YK
Sbjct: 271 QVAPYFLEACRITGLPISDDFNAPNGRLGAAYYHFCIKNGVRMSAARAFLGPIM---DKRSNLDIVLKAEVTHVLMSG----------------------EKDG-----VYTATGVSFAAEGGDSREARLKSPGRGKGKGNVVLTAGAIHTPKILMNSGVGPRRKLEEAGIPVLVDLPGVGENLQ-DHPSVPMTFTLTTPLAGRVAAAGSF-EELTEYK 457
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Match: A0A5D6XSW6_9STRA (GMC_OxRdtase_N domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSW6_9STRA) HSP 1 Score: 122 bits (305), Expect = 2.000e-27 Identity = 93/274 (33.94%), Postives = 131/274 (47.81%), Query Frame = 1
Query: 25 FLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARAMLGDIIMGK--DGRTNLDILHGALVTRVLFEGGRKVRTYRGENRDPTTTTTDLEEEEGSMVQDVPSAIGVEFAVDGKVKKASITKRDAGSAIVVAAGALHTPKMLMTSGIGDKAELSSNKIDCIAHVPGVGKNLQQDHASVGVMYMLGPDLLKLMPSAYTVVQELERYKIKVLKEINFDFPMAMKEIDEDSDSDPLTNKEENSPS---LFSSAGLSAGAFLTSPYAPDPAI 831
F+++CE G+P T DFN PGGR GAG+Y+F + GVR+SA R LG ++ G+ R N +L LV++V+ + D A+GVE G ++ +I +G ++V AGA++TPK+LM SGIGD + L KI H+P VG NLQ DH +GV + L P A+ + ELE+Y ++EN+PS L SAG+SAGAFL P + P I
Sbjct: 238 FVQACEAVGLPRTADFNAPGGRFGAGFYHFNTRDGVRESAVRTFLGPLLQGQKQSQRANFRVLLNTLVSKVV-------------------------------IGDAARAVGVEIVQAGGQRE-TIRLSKSGQ-VIVTAGAINTPKVLMMSGIGDASMLEGLKIPVKKHLPRVGMNLQ-DHPVLGVTFE------SLKPLAFDLQSELEQYF-------------------------QARTRKENNPSSYGLLGSAGISAGAFLIPPGSTVPEI 446
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Match: K3X1U6_GLOUD (GMC_OxRdtase_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1U6_GLOUD) HSP 1 Score: 110 bits (276), Expect = 1.060e-23 Identity = 93/278 (33.45%), Postives = 129/278 (46.40%), Query Frame = 1
Query: 10 QVAPFFLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARAMLGDIIMGK--DGRTNLDILHGALVTRVLFEGGRKVRTYRGENRDPTTTTTDLEEEEGSMVQDVPSAIGVE-FAVDGKVKKASITKRDAGSAIVVAAGALHTPKMLMTSGIGDKAELSSNKIDCIAHVPGVGKNLQQDHASVGVMYMLGPDLLKLMPSAYTVVQELERY-KIKVLKEINFDFPMAMKEIDEDSDSDPLTNKEENSPSLFSSAGLSAGAFLTSPYAPDPAI 831
+++ F+++CE+ G+P + DFN P GR GAGYY+F + GVR+SAAR LG ++ G+ R N +L +V +V V D A GVE + DG + ++K+ ++V AGA++TPK+LM SGIGDK L KI H+ VG NLQ DH +GV + L + V ELERY + K KE N S + SAG+SAGAFL P + P I
Sbjct: 250 ELSEQFVQACEQIGLPRSVDFNAPSGRFGAGYYHFNTRDGVRESAARTFLGPLLQGQAQSQRANFRMLLNTMVLKV-------------------------------NVNDALEAQGVEIYHSDGTRESIGLSKK---GQVIVTAGAINTPKVLMMSGIGDKGVLQRLKIPVKKHLSRVGMNLQ-DHPVLGVTFESVNSL------SIDVESELERYFRAKQAKESNV-----------------------TSFGVMGSAGISAGAFLIPPGSTIPEI 463
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Match: A0A6A3DYS6_9STRA (GMC_OxRdtase_N domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DYS6_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.120e-23 Identity = 89/274 (32.48%), Postives = 125/274 (45.62%), Query Frame = 1
Query: 25 FLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARAMLGDIIMGKDG---RTNLDILHGALVTRVLFEGGRKVRTYRGENRDPTTTTTDLEEEEGSMVQDVPSAIGVEFAVDGKVKKASITKRDAGSAIVVAAGALHTPKMLMTSGIGDKAELSSNKIDCIAHVPGVGKNLQQDHASVGVMYMLGPDLLKLMPSAYTVVQELERYKIKVLKEINFDFPMAMKEIDEDSDSDPLTNKEENSPS--LFSSAGLSAGAFLTSPYAPDPAI 831
F+E+CE+ GIP T DFN PGGR GAGYY+F I+ GVR+SAA+A LG ++ K G ++N ++ VTR+ R+ T + A G+V +V AGA++TPK+LM SGIG++ L + H+P VG NLQ DH VG+ + +P A + EL+ Y + ++K N+ S LF SAG+SAGAFL P + P I
Sbjct: 230 FIEACEQLGIPRTTDFNAPGGRYGAGYYHFNIRDGVRESAAKAFLGPMLDSKTGESTKSNFRLMLDTTVTRIRINDNNVTEGVEVRFRNGTEQL-------------------IRLAEHGEV--------------IVTAGAINTPKVLMLSGIGNRDALRKVGLPLKKHLPRVGMNLQ-DHPVVGMTFECE------LPRAVDLKSELDSYL------------------------NAASSKHTNASSFGLFGSAGISAGAFLIPPGSTLPEI 439
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Match: M4BBH5_HYAAE (GMC_OxRdtase_N domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BBH5_HYAAE) HSP 1 Score: 107 bits (268), Expect = 1.260e-22 Identity = 86/275 (31.27%), Postives = 125/275 (45.45%), Query Frame = 1
Query: 25 FLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARAMLGDII---MGKDGRTNLDILHGALVTRVLFEGGRKVRTYRGENRDPTTTTTDLEEEEGSMVQDVPSAIGVEFAVDGKVKKASITKRDAGSAIVVAAGALHTPKMLMTSGIGDKAELSSNKIDCIAHVPGVGKNLQQDHASVGVMYMLGPDLLKLMPSAYTVVQELERYKIKVLKEINFDFPMAMKEIDEDSDSDPLTNKEENSPS---LFSSAGLSAGAFLTSPYAPDPAI 831
F+E+C +AGIP T DFN PGGR GAGYY+F + G+R+SAA+ LG ++ + R+N ++ +VT++ Q+V + V +A +G + + + ++V AGA++TPK+LM SGIGD L + H+P VG NLQ DH VG+ + P + EL+ Y + TN + + S LF SAGLSAGAFLT P + P I
Sbjct: 219 FIEACVQAGIPRTMDFNAPGGRHGAGYYHFNTRDGIRESAAKTFLGPMLDNNTAESTRSNFRLMLDTMVTKININE-----------------------------QNVAEGVEVRYA-NGTAEVIRLAEL---GEVIVTAGAINTPKILMLSGIGDYVTLEKAGLPTKKHLPWVGMNLQ-DHPVVGMSFKYDPK------EEVDLEAELDAYFM-------------------------ATNARDTTASSYGLFGSAGLSAGAFLTPPGSTVPEI 428
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Match: A0A2D4CBF4_PYTIN (GMC_OxRdtase_N domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBF4_PYTIN) HSP 1 Score: 107 bits (268), Expect = 1.630e-22 Identity = 87/269 (32.34%), Postives = 125/269 (46.47%), Query Frame = 1
Query: 25 FLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARAMLGDIIMGKDGRTNLDILHGALVTRVLFEGGRKVRTYRGENRDPTTTTTDLEEEEGSMVQDVPSAIGVEFAVDGKVKKASITKRDAGSAIVVAAGALHTPKMLMTSGIGDKAELSSNKIDCIAHVPGVGKNLQQDHASVGVMYMLGPDLLKLMPSAYTVVQELERYKIKVLKEINFDFPMAMKEIDEDSDSDPLTNKEENSPSLFSSAGLSAGAFLTSPYAPDPAI 831
F+E+ E GIP T+DFN P GR G G+Y+F + GVR+SAAR +G ++ K+GR+N +L VTR+ F+ RGE +A GVE ++ + + A ++V AGA++TPK+LM SG+G K +L + I H+P VG NLQ DH V V + P+ P + EL Y ++ +K S + SAG+SAGAFL P + P I
Sbjct: 145 FVEASEEIGIPRTDDFNAPHGRHGVGFYHFNTRDGVRESAARRFVGPML--KEGRSNFHLLLNTEVTRIQFD-------ERGE-----------------------TATGVEVVHSDGTRQ--LIRVSAQGNVIVTAGAVNTPKVLMQSGVGHKDDLKQLGLPVIKHLPRVGMNLQ-DHPVVAVAFE-NPN-----PVPVDLNSELATYFAATTRQ----------------------DKNATSYGMMGSAGISAGAFLVPPGSTLPEI 350
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Match: G5AA76_PHYSP (GMC_OxRdtase_N domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5AA76_PHYSP) HSP 1 Score: 107 bits (266), Expect = 2.450e-22 Identity = 86/274 (31.39%), Postives = 124/274 (45.26%), Query Frame = 1
Query: 25 FLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARAMLGDII---MGKDGRTNLDILHGALVTRVLFEGGRKVRTYRGENRDPTTTTTDLEEEEGSMVQDVPSAIGVEFAVDGKVKKASITKRDAGSAIVVAAGALHTPKMLMTSGIGDKAELSSNKIDCIAHVPGVGKNLQQDHASVGVMYMLGPDLLKLMPSAYTVVQELERYKIKVLKEINFDFPMAMKEIDEDSDSDPLTNKEENSPS--LFSSAGLSAGAFLTSPYAPDPAI 831
F+E+CE GIP T DFN PGGR GAGYY+F + GVR+SAA+A LG ++ GK ++N ++ VTR+ V + V ++ +G + + K ++V AGA++TPK+LM SG+G++ L + H+P VG NLQ DH +G+ + +P A + EL+ Y K N K N+ S LF SAG+S GAFL P + P I
Sbjct: 247 FIEACEELGIPRTADFNAPGGRYGAGYYHFNTRDGVRESAAKAFLGPMLDTKTGKSTKSNFRLMLDTTVTRIRINDNN-----------------------------VTEGVEVRYS-NGTAQLIRLAKH---GEVIVTAGAINTPKILMLSGLGNRDTLEKVDLPVKKHLPRVGMNLQ-DHPVIGMTFECE------LPRAVDLKAELDSY----FKATN--------------------TKHTNASSFGLFGSAGISVGAFLIPPGSTIPEI 456
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Match: A0A2P4YUG4_9STRA (Choline dehydrogenase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YUG4_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.020e-22 Identity = 89/279 (31.90%), Postives = 130/279 (46.59%), Query Frame = 1
Query: 10 QVAPFFLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARAMLGDII---MGKDGRTNLDILHGALVTRVLFEGGRKVRTYRGENRDPTTTTTDLEEEEGSMVQDVPSAIGVEFAVDGKVKKASITKRDAGSAIVVAAGALHTPKMLMTSGIGDKAELSSNKIDCIAHVPGVGKNLQQDHASVGVMYMLGPDLLKLMPSAYTVVQELERYKIKVLKEINFDFPMAMKEIDEDSDSDPLTNKEENSPS--LFSSAGLSAGAFLTSPYAPDPAI 831
++ F+E+C GIP TEDFN P GR GAGYY+F + GVR+SAA+A LG I+ + R+N ++ VT++ G ++V + V + +G V+ + + ++V AGA++TPK+LM SG+G++ L + H+P VG NLQ DH VG+++ E E +I LK +D DS + K N+ S LF SAGLSAGAFL P + P I
Sbjct: 187 DISAEFIEACAELGIPRTEDFNAPDGRYGAGYYHFNTRDGVRESAAKAFLGPILDSDTAQSTRSNFRLMLDTTVTKI-----------------------------GINDENVTEGVEVRYG-NGTVQLIRLAEH---GEVIVTAGAINTPKILMLSGLGNRDTLKKAGLPLTKHLPRVGMNLQ-DHPVVGMIF------------------ECEAPRIVDLK------------MDLDSYFKATSTKHANASSFGLFGSAGLSAGAFLIPPGSTIPEI 401 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89302.16431.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig89302.16431.1 >prot_H-elongata_contig89302.16431.1 ID=prot_H-elongata_contig89302.16431.1|Name=mRNA_H-elongata_contig89302.16431.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=287bp IIYQVAPFFLESCERAGIPITEDFNKPGGREGAGYYNFAIKSGVRDSAARback to top mRNA from alignment at H-elongata_contig89302:91..2332+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig89302.16431.1 ID=mRNA_H-elongata_contig89302.16431.1|Name=mRNA_H-elongata_contig89302.16431.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2242bp|location=Sequence derived from alignment at H-elongata_contig89302:91..2332+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig89302:91..2332+ >mRNA_H-elongata_contig89302.16431.1 ID=mRNA_H-elongata_contig89302.16431.1|Name=mRNA_H-elongata_contig89302.16431.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1722bp|location=Sequence derived from alignment at H-elongata_contig89302:91..2332+ (Himanthalia elongata Himel1 dioecious)back to top |