mRNA_H-elongata_contig89249.16426.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A6H5L442_9PHAE (Peptidase_S26 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L442_9PHAE) HSP 1 Score: 397 bits (1019), Expect = 8.810e-131 Identity = 241/461 (52.28%), Postives = 298/461 (64.64%), Query Frame = 1
Query: 1 LFFLFSQRSEGSALGDILAPEDTQEGVSSAAKSAMASGSISIEPPSFLKRLFSVPRNIRRTVGVGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTT-----------STESGSER---------------------------------------VLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLER-EWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRDDIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPR-TMRS----SGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFGLL 1215
L LF +R E ALGD+L PED G +S+EPP FLKR+FS+P+N+RRT GDVVVP+IGARDGWGGIRQ +GI+PGVEYRILE++ ST++ S+ VL+SA++A ++FDDG L FTMRP+YPLVA+LER +WPVRVPAREFPVMLTPFSYNAATAWA+ TTSLSLL+VGFV SQALTLSVI S SMEPTLQVGDVVLVEKVSR+ +++ +DIV+FR PP L+D+V+ AGGTL+ DLFVKRVAAL GD V+VSADG V+V +A + P+ T R+ S S++ILGD G+EG A ++ +A+ D V QRI ++ K LP G++FVLGDN SMDSRVWG+LD+G+IVGH LL+VFP RSFGLL
Sbjct: 84 LTMLFEKRPEERALGDVLIPEDAPGGAGEGGGDDAIG--VSVEPPGFLKRVFSIPKNVRRTAAAGDVVVPVIGARDGWGGIRQAS-NQGIYPGVEYRILEISVFPTARTPPTGDSTKASSDSAAAVAPYLSSXXXXXXXXXXXXXXXXXXXQPDLDAEPTAVLASARDAPPESFDDGSLVFTMRPIYPLVARLERGDWPVRVPAREFPVMLTPFSYNAATAWAAFTTSLSLLSVGFVLSQALTLSVINSHSMEPTLQVGDVVLVEKVSRSFLVKPNDIVYFRPPPVLQDIVSRAGGTLSPSDLFVKRVAALSGDTVTVSADGSVDVRAAAGGGITRLPKGTNRADNGGSAAGGESDVILGDG-----VAGQEGSAAAVAAAKGGTLAE------EKVALPDSVLQRITRLDEKVLPSGSVFVLGDNPAASMDSRVWGQLDKGEIVGHALLRVFPPRSFGLL 530
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A0G4EFP7_VITBC (Mitochondrial inner membrane protease subunit n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EFP7_VITBC) HSP 1 Score: 186 bits (471), Expect = 1.360e-50 Identity = 136/350 (38.86%), Postives = 179/350 (51.14%), Query Frame = 1
Query: 166 RNIRRTVGVGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAA-VIRRDDIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSP-PASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFG 1209
+++RR + G +VP+IGAR GW IR+ + R+G++PGV+YR+ + R D T+RP Y LV KLER+WPV + E P+ LTP YN AT ++L ++ LL V VASQ +L IPS SMEPTL GDV+LVEKVSR + DIV F P LR V AGG L DLFVKRVAA GD V+V +G+ + P P T +G + A G R A+ R A P A + V + L G ++VLGDN S+DSR+WGEL E +IVGHP++++FP FG
Sbjct: 102 KDMRREIREGGDIVPLIGARPGWAAIRENMFRKGVYPGVDYRVERIDVRANGDPIR----------------DAVITVRPRYRLVDKLERQWPVTIAMSEVPIFLTPRMYNTATLISTLLSAAQLLAVALVASQFCSLYYIPSYSMEPTLHKGDVLLVEKVSRLVRPPKNGDIVLFNPPEQLRTFVRQAGGQLAPGDLFVKRVAATQGDRVTVD-NGLPTINGHTYVYPEPEEPPT-------------IGSDAPPARADGSMQRLAI-------GRGFAWPYAGEAPSQ--------WVADECVLGSGAVYVLGDNPVRSVDSRLWGELRESEIVGHPVIRLFPWGRFG 406
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A835YRZ1_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRZ1_9STRA) HSP 1 Score: 189 bits (481), Expect = 3.160e-49 Identity = 134/312 (42.95%), Postives = 159/312 (50.96%), Query Frame = 1
Query: 277 GVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRDDIVFFRAPPALRDVVASAGGT-LNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPP----GTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPL 1197
GVEYR L +T L S +A +AF+ GDL +RP+YPL+ +LER WPV V AR+ P+ LT F+YN ATAWA+L LTLS IPSRSMEP L+ GDVVLVEKVSR A++RR ++VFF PPALR VA AGG L DLFVKRVAAL GD V+V+ DG V A +V G+ R A R R L R A G+ FVLGDN S+DSRVWG+L IVG PLL+VFPL
Sbjct: 5 GVEYRCLGITCGGAP-----LDSVADAPPNAFEAGDLLLQLRPIYPLIPRLERAWPVTVAARDVPIALTAFAYNVATAWAALXXXXXXXXXXXXXXXTLTLSFIPSRSMEPVLRPGDVVLVEKVSRGALLRRGEVVFFAPPPALRAAVADAGGAPLRGGDLFVKRVAALTGDDVAVARDGETRVRGA------------------------------LVRGAGDLPRAA---------RSRLLLREAXXXXXXXXXXXXXXXXXXXXXXXXXXAGSAFVLGDNPLHSVDSRVWGDLPYSNIVGRPLLRVFPL 272
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A448ZBV4_9STRA (Mitochondrial inner membrane protease subunit n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBV4_9STRA) HSP 1 Score: 181 bits (460), Expect = 2.690e-47 Identity = 128/346 (36.99%), Postives = 180/346 (52.02%), Query Frame = 1
Query: 181 TVGVGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRD---DIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFG 1209
+V VG VVVP++ R + +G +PGVEYRIL + G ER S + ++PVYPLVA+LER WPVRV R+ P + TP YN +A+ SL T+ S L V F+ SQA++L IPS+SM+PTL+VGDV+LV+KVS R++ D+V F P L+++VA GG L++RDLFVKR+AA PGD V+V DG V+V G++ V A R + + I+ E+K + +FV+GD + VS+DSRVWG L+ IVG P+++++PL FG
Sbjct: 341 SVRVGKVVVPVLSRLSQ----RPKMFEQGAYPGVEYRILRILDR--DGRERFTSCP-----------GADYELKPVYPLVAQLERPWPVRVNERDIPKLFTPSMYNLLSAFGSLFTAASGLFVAFLLSQAISLFFIPSKSMDPTLKVGDVLLVDKVSSRTPFRKNEVGDMVLFSPPSRLQEIVAKNGGNLSSRDLFVKRIAASPGDRVTVYKDGKVDVN-------------------------------------GQD--------------VVAGRRDLCEAEPLRLIEKYIEPREDKIIDQKEVFVMGDCSSVSVDSRVWGSLEAENIVGRPIVRIWPLDRFG 618
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: B7G479_PHATC (Mitochondrial inner membrane protease subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G479_PHATC) HSP 1 Score: 169 bits (428), Expect = 6.210e-43 Identity = 135/351 (38.46%), Postives = 182/351 (51.85%), Query Frame = 1
Query: 184 VGVGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRA-----AVIRRDDIVFFRAPPALRD-VVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFGLLP 1218
V VG +VVP++ R + ++G +PGVEYRIL + + + R L +Q ++ + ++PVYPLV +LER WPVRV R+ P +LTP YN +A SL T+L+ L V FV SQA++L VIPS SM PTL GDVVLV+K++ I D+VFF P L+D VV S G L RDLFVKRVAA PGDV++V G V V A P R E + ++EA + +A P DG N R+ PG + VLGD A VS+DSRVWG L + IVG P+++++P +G +P
Sbjct: 301 VRVGTIVVPVLQKL----AQRPRMFQQGAYPGVEYRILRII---DPHTNRDLFYSQPGAD---------YELKPVYPLVRQLERPWPVRVNERDIPKLLTPTMYNTVSAVGSLLTALTGLLVAFVLSQAVSLFVIPSLSMAPTLAKGDVVLVDKLTPRFWGPRTNIPVGDVVFFHPPEPLQDMVVRSTGRRLAPRDLFVKRVAAGPGDVLTVDPSGSVRVNGAT-------PAVAR--------ETCEAEPLRLIEAYLK----------------KASPDN------PDGA--------NVRIGPGQVAVLGDCASVSIDSRVWGPLPQNDIVGRPVVRLWPPSRWGPVP 590
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A1Z5JWA6_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JWA6_FISSO) HSP 1 Score: 156 bits (394), Expect = 9.790e-39 Identity = 121/351 (34.47%), Postives = 179/351 (51.00%), Query Frame = 1
Query: 190 VGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRD---------DIVFFRAPPALRDVVASAGGT-LNTRDLFVKRVAALPGDVVSVS-ADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFG 1209
VG +VVPI+ + R + R+G +PGVEYRIL + E+G++ S + + ++P+YPLV +LER WPVRV R+ P + TP YN +A SL T+++ L F+ SQA+++ VIPSRSMEPTLQVGDV+LV+KV+ + + +I+ F +L+D+V +GG L R+LFVKRVAA PG + ++ A G VE++ + P R + GEE R+ + + ++ + ++ P + VLGD + VS+DSRVWG L IVG PLL+V+PL G
Sbjct: 213 VGRIVVPILRSL----AERPAMFRQGTYPGVEYRILRII-DPETGADLFYSRP-----------GVDYELKPIYPLVQQLERLWPVRVNERDIPKLYTPAMYNGISAVGSLLTAVTGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKVTPRLTNKLNLNKYNDWVGNIILFHPTESLQDIVLKSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRK-------PLERR-------------------DFCGEE-----------PTRL---------------IEKFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVG 495
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A1Z5KRR1_FISSO (Mitochondrial inner membrane protease subunit n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRR1_FISSO) HSP 1 Score: 152 bits (385), Expect = 1.660e-38 Identity = 122/353 (34.56%), Postives = 178/353 (50.42%), Query Frame = 1
Query: 184 VGVGDVVVPIIGARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRD---------DIVFFRAPPALRDVVASAGGT-LNTRDLFVKRVAALPGDVVSVS-ADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFG 1209
V VG +VVPI+ R + R+G +PGVEYRIL + E+G++ S + + ++P+YPLV +LER WPVRV ++ P + TP YN +A SL T++ L F+ SQA+++ VIPSRSMEPTLQVGDV+LV+K++ + + IV FR +L+D+V +GG L R+LFVKRVAA PG + ++ A G VE++ + P R + GEE R+ + + ++ + ++ P + VLGD + VS+DSRVWG L IVG PLL+V+PL G
Sbjct: 79 VRVGRIVVPILRNL----AERPAMFRQGTYPGVEYRILRII-DPETGADLFYSRP-----------GVDYELKPIYPLVQQLERLWPVRVNEKDIPRLYTPAMYNGLSAIGSLFTAVMGLLAAFLVSQAISIFVIPSRSMEPTLQVGDVLLVDKLTPRLTNKLNLNKYSEWVGYIVLFRPTESLQDIVLQSGGRKLTDRELFVKRVAAGPGSTLKITDASGAVEIDGRK-------PLERR-------------------DFCGEE-----------PTRL---------------IEKFLRQGDEFQVGPKQVAVLGDCSSVSIDSRVWGPLPTDNIVGRPLLRVWPLSRVG 363
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A7S4KZX7_GUITH (Mitochondrial inner membrane protease subunit (Fragment) n=3 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4KZX7_GUITH) HSP 1 Score: 156 bits (395), Expect = 1.720e-38 Identity = 124/353 (35.13%), Postives = 175/353 (49.58%), Query Frame = 1
Query: 163 PRNIRRTVGVGDVVVPIIG-ARDGWGGIRQGLVRRGIFPGVEYRILEVTTSTESGSERVLSSAQEASEDAFDDGDLTFT----------MRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVS-RAAV-IRRDDIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLL 1182
P ++R+++ G V VP +G R W R L +G++PG+EYRI+ + EDA +DG + F+ +RP+Y + L+R WPVRV E PV +T YN AT SL LL G +A +A++L IPSRSMEPT+ GD+++VEK++ R V ++R++I+ F P L +V S GG L DLFVKRVA LP + VS DG V ++ GKS SE +L + ++ E P R T+S I +GV +P ++ VLGD VS+DSRVWG LD ++ G PLL
Sbjct: 286 PEDVRKSLRCGQVFVPSLGIGRADWRRRRDELFLKGVYPGLEYRIMGM-------------------EDA-EDGTMIFSASSSKNPILKVRPIYAVRKDLDRSWPVRVSMGEIPVAVTQAMYNTATLIIVTMASLGLLMSGLIAREAISLYKIPSRSMEPTIMAGDLLVVEKMTARLGVPLKRNEIILFSPPEELERIVRSNGGRLRGGDLFVKRVAGLPHESFKVSGDGRVLLD-----------------GKS--SESLLAERKNLCE-----------------PDKRTGEATSSRILPKEGV-----------IPDKSLLVLGDCKAVSVDSRVWGPLDASKVKGRPLL 571
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A7S1CZJ0_CYCTE (Mitochondrial inner membrane protease subunit n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CZJ0_CYCTE) HSP 1 Score: 143 bits (360), Expect = 4.160e-36 Identity = 103/297 (34.68%), Postives = 144/297 (48.48%), Query Frame = 1
Query: 391 FTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRAAVIRRD---DIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSVSADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGT-------IFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFPLRSFGLLP*ASRDSRHRRW 1251
+ ++P+YPLV +LER WPV V E P + T YN +A SL T+ L V + SQ ++L IPSRSM+PTL VGDVV+VEKVS + D++ F P L+++V S+GG + RDLFVKRVAA P V+V +DG V ++ EM L + + EE G +IE + + PGT +FV+GD + VS+DSRVWG L +I+G PL +V+P+ FG +P + W
Sbjct: 20 YDLKPIYPLVDQLERPWPVTVNEAEIPRLYTVGMYNTVSALGSLFTATFGLGVAYALSQMISLFFIPSRSMDPTLAVGDVVVVEKVSPRIFKSNNHVGDVILFHPPSRLQEIVKSSGGRIGNRDLFVKRVAAEPTQKVTVGSDGKVLID-----------------------EMELQEKR---DMCSEEPLG---------------------------------LIE-RYIEPGTTEVQSDEVFVMGDCSSVSIDSRVWGPLPNKEIIGKPLFRVWPIERFGSIPTLEKTQLQTEW 256
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Match: A0A7S0Y0G9_HEMAN (Mitochondrial inner membrane protease subunit n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0Y0G9_HEMAN) HSP 1 Score: 143 bits (361), Expect = 1.800e-35 Identity = 115/354 (32.49%), Postives = 166/354 (46.89%), Query Frame = 1
Query: 163 PRNIRRTVGVGDVVVPIIGARDGWGGIRQGLVRR-------GIFPGVEYRILEVTT-STESGSERVLSSAQEASEDAFDDGDLTFTMRPVYPLVAKLEREWPVRVPAREFPVMLTPFSYNAATAWASLTTSLSLLTVGFVASQALTLSVIPSRSMEPTLQVGDVVLVEKVSRA-AVIRRDDIVFFRAPPALRDVVASAGGTLNTRDLFVKRVAALPGDVVSV-SADGVVEVESARSPPASAAPRTMRSSGKSRVSEMILGDTSSVVEALGEEGRGAMISTVSTSPRVRALPRTASAIAVADGVRQRIQVIENKRLPPGTIFVLGDNAEVSMDSRVWGELDEGQIVGHPLLKVFP 1194
PR+ R + VG V VP A GG R GL++ G++PG+EYR++ + T+ RV A G++ ++RP+YPL +LER WPV V + + P LT YN+ T + S+S++ A +A++ IPS SMEPT+ GD++L EK+S +R +I+ F P +L+ VV S GG + RDLF+KRVAALPGDVV+V +ADG V V R + R G Q + + ++ G FVLGD VS+DSRVWG L + + PL+K++P
Sbjct: 39 PRDTRGELRVGQVFVPTTLAG---GGSRPGLLQNRDRMFAVGVYPGIEYRLMGMRDIDTKETLFRVPEGA----------GEVEMSVRPIYPLDKRLERPWPVVVSSSDVPCFLTQAMYNSLTLVGTALWSVSVVLFVLFAREAVSFYKIPSASMEPTIHRGDLILAEKLSPLWKTPQRGEILLFTPPDSLKAVVESQGGFVGPRDLFIKRVAALPGDVVTVDTADGSVTVNGER------------------------------------------------------VQRQGPTCDEPSGGAQGLVRPQKGKVKSGVSFVLGDCGPVSVDSRVWGTLSDDDVKARPLVKLWP 325 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89249.16426.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig89249.16426.1 >prot_H-elongata_contig89249.16426.1 ID=prot_H-elongata_contig89249.16426.1|Name=mRNA_H-elongata_contig89249.16426.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=373bp MASGSISIEPPSFLKRLFSVPRNIRRTVGVGDVVVPIIGARDGWGGIRQGback to top mRNA from alignment at H-elongata_contig89249:431..2646+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig89249.16426.1 ID=mRNA_H-elongata_contig89249.16426.1|Name=mRNA_H-elongata_contig89249.16426.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2216bp|location=Sequence derived from alignment at H-elongata_contig89249:431..2646+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig89249:431..2646+ >mRNA_H-elongata_contig89249.16426.1 ID=mRNA_H-elongata_contig89249.16426.1|Name=mRNA_H-elongata_contig89249.16426.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2238bp|location=Sequence derived from alignment at H-elongata_contig89249:431..2646+ (Himanthalia elongata Himel1 dioecious)back to top |