mRNA_H-elongata_contig8922.16423.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Match: D8LRH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH9_ECTSI) HSP 1 Score: 296 bits (759), Expect = 3.880e-91 Identity = 197/491 (40.12%), Postives = 247/491 (50.31%), Query Frame = 2
Query: 35 AGFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCSIAVLGIAFGFSTSFYWAIASRFLLGVMNGVVGTSKTMISEVCTKEHEAVGMSTITACWSVGLVGGPGLGGLLSEPAKYYPRFFSESGLF---PYLLPNLVGACIALSALLMVFFFLHETKPTQSSRS---------------------------------------------------------------GYRSVKF-------KGRNCCALIATDRHGAYG------LSPEGGDSNAHEEEEEEKNDVGSAF----------------------------------------------WAECLVPIRLLAERNVRLILLVYGLVSYPLQSILVNVSYVCLQFTKIGADEVYPLWALSTVASGGLDWTTNEIGKCLSIAGLAVLVFQMVVYPRIIKAVSIQSSQRISSFVSVPLFLAAPLISLFHDKGWMLIAVNLVMLVTFNMVVNTV 1132
AG+YAGYVSSA M GR GSSYFWGRFAD +GRLPV+Y L S+ VL IAFG STSF WA+ RFLLGV+NG++G SK M SEVC KEHEA GM+ + C S+GLV GPGLGGLL+EPA +YP FS+SGLF PYLLPN+VGA IAL+ L VFFFL ET+ ++R G R+V++ G C I D G LS G SN ++ ++ D +AF W ECLVPI+LL ER R ++ VY L S F IG E+YPLWALSTVASGGLDW++ +IG+ LS+ G+ +L FQ++VYPR+ K + SQR + F+S+P+FL P +S L+A +LV+L N V NTV
Sbjct: 68 AGYYAGYVSSAFMVGRVGSSYFWGRFADSHGRLPVIYAGLTSMVVLSIAFGLSTSFLWALGCRFLLGVLNGLLGISKAMTSEVCGKEHEATGMAYVLGCASIGLVIGPGLGGLLAEPATHYPTVFSQSGLFGRFPYLLPNIVGAGIALTGLPFVFFFLKETRHVHNNRGDSSGEFKLLSVSEAGTVETHEAATVEEGGMVEMTPTARTQNTLESDTNGSGRDNILLADRRAEGSRAVRYDGGIEGRSGTADCYDIDEDHGRNSGEQSRQLLSASGRSSNDDYVDDGDERDEAAAFGAGGGRKSNRERFRTTTRALQRLEKAKGFGDSDSGGEGRWGRRSTCWRECLVPIQLLTERRTRNVMFVYALFS----------------FVAIGNRELYPLWALSTVASGGLDWSSKQIGQALSVCGIFMLFFQLLVYPRLSKRIGATRSQRWACFLSIPVFLVFPTLSHLRGTERTLVAASLVLLFLTNAVANTV 542
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Match: D8LRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRH7_ECTSI) HSP 1 Score: 254 bits (649), Expect = 1.040e-74 Identity = 186/544 (34.19%), Postives = 234/544 (43.01%), Query Frame = 2
Query: 35 AGFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCSIAVLGIAFGFSTSFYWAIASRFLLGVMNGVVGTSKTMISEVCTKEHEAVGMSTITACWSVGLVGGPGLGGLLSEPAKYYPRFFSESGLF---PYLLPNLVGACIALSALLMVFFFLHETKPTQSSRS---------------------------------------------------------------------------------------GYRSV--KFKGRNCCAL-----------------------------IATDRHGA-------------------------------------------------------------------YGLSPE-GGDSNAHEEEEEEKNDVGSAFWAECLVPIRLLAERNVRLILLVYGLVSYPLQSILVNVSYVCLQFTKIGADEVYPLWALSTVASGGLDWTTNEIGKCLSIAGLAVLVFQMVVYPRIIKAVSIQSSQRISSFVSVPLFLAAPLISLFHDKGWMLIAVNLVM 1099
AG+YAGY++SA M GRF AD YGRLPV+YI L SI VL +AFG ST+F+WA+ RFLLG MNG++ SK MISE+C K+HE VGM IT CWS GLV GP GGLL++PA +YP FSESGLF PYLLPN+VGA IA S L MVFFFL ET RS G+R+V KGR + I DR+G G S E GGD++ E + SA W ECLVP+RLL E+ VR IL VYG+ S+ L IG E+YPLWALSTVASGGLDWTT +IG+ LS+ G+ +L FQ+VVYP + K + + SQR + F+++P++ P +S G L+ ++V+
Sbjct: 47 AGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHETVGMGYITGCWSFGLVIGPAFGGLLAQPATHYPNVFSESGLFGRYPYLLPNVVGASIAFSGLPMVFFFLKETTNLGDGRSVTDTRAGFDPVATSEPSPLLETQETGMEEGRGGQLELTPLTQSNSLDDVDXXXXXXXXHLAELLGERSEECSSARATVSTAAGGDGGGHRAVVPDSKGRGGSSAWEKSIGGAINIPSNDRVTLGDESETASKKIDVDRYGVGNSFGDGGSNRNSSGDRFLQPPREAPSGGASHSSPVGRSETLGFAGSTKGSPSGRRDHIGDDLGNRVTGFSTEDGGDTSCAAGESQTATTRRSAVWRECLVPVRLLEEKRVRAILFVYGIYSFSL----------------IGFGEIYPLWALSTVASGGLDWTTKQIGQVLSLVGVGMLAFQLVVYPWLSKRIGVTRSQRWACFLAIPVYAFFPFLSRLRGSGVPLVVGSIVL 574
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Match: D7G0L9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0L9_ECTSI) HSP 1 Score: 201 bits (512), Expect = 6.940e-57 Identity = 128/346 (36.99%), Postives = 185/346 (53.47%), Query Frame = 2
Query: 38 GFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCSIAVLGIAFGFSTSFYWAIASRFLLGVMNGVVGTSKTMISEVCTKEHEAVGMSTITACWSVGLVGGPGLGGLLSEPAKYYPRFFSESGLF---PYLLPNLVGACIALSALLMVFFFLHETKPTQSSRSGYR---SVKFKGRNCCALIATDRHGAYGLSPEGGDSNAHEEEEEEKNDVGSAFWAECLVPIRLLAERNVRLILLVYGLVSYPLQSILVNVSYVCLQFTKIGADEVYPLWALSTVASGGLDWTTNEIGKCLSIAGLAVLVFQMVVYPRIIKAVSIQSSQRISSFVSVPLFLAAPLISLF 1057
GFYAGYV+S+ FGRF S YFWG D GR PV+ + L S+ + FG S S+ AI +R +LG+ NG++ +T +SEVC K+H GM+ +A ++ L+ G G+GGLL++PA +YP FFS +GLF P+LLPNL+GA +++ L+++ FFL ETK SG SV KG D G G P LLA +V+++L + ++S IG DEVYPL+A ST GGL W+T EIGK L + G+ + Q++++P +IK V I + QR+ + + FLA P +++F
Sbjct: 31 GFYAGYVASSFTFGRFLSGYFWGFVTDRLGRKPVIIMGLLSMITFSVLFGISRSYTMAITTRLVLGLTNGIMPALRTTLSEVCGKKHVVRGMTYTSAATAISLIFGTGIGGLLAQPALHYPGFFSATGLFGRFPFLLPNLMGAVMSVLTLILIVFFLPETKDYVEQHSGVADEVSVSKKG---------DEPGLLG-------------------------------PSGLLATPHVKMVLFLTCIIST----------------VSIGFDEVYPLFAFSTPDVGGLGWSTVEIGKVLVMTGVLMACCQLLLFPPLIKMVGITTWQRLGCRIGIAAFLAIPAVNVF 320
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Match: A0A6H5L4Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Q8_9PHAE) HSP 1 Score: 201 bits (510), Expect = 5.430e-56 Identity = 102/169 (60.36%), Postives = 120/169 (71.01%), Query Frame = 2
Query: 35 AGFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCSIAVLGIAFGFSTSFYWAIASRFLLGVMNGVVGTSKTMISEVCTKEHEAVGMSTITACWSVGLVGGPGLGGLLSEPAKYYPRFFSESGLF---PYLLPNLVGACIALSALLMVFFFLHETKPTQSSRS 532
AG+YAGY++SA M GRF AD YGRLPV+YI L SI VL +AFG ST+F+WA+ RFLLG MNG++ SK MISE+C K+HE VGM +T CWS GLV GP GGLL++PA +YP FSESGL+ PYLLPN+VGA IA S L MVFFFL ET RS
Sbjct: 79 AGYYAGYLASAFMVGRFXXXXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNGLIAISKCMISEICGKQHEKVGMGYVTGCWSFGLVIGPAFGGLLAQPATHYPNVFSESGLYGRYPYLLPNVVGASIAFSGLPMVFFFLKETTNLDDGRS 247
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Match: A0A6H5K5T8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T8_9PHAE) HSP 1 Score: 196 bits (497), Expect = 2.380e-53 Identity = 130/364 (35.71%), Postives = 192/364 (52.75%), Query Frame = 2
Query: 35 AGFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCSIAVLGIAFGFSTSFYWAIASRFLLGVMNGVVGTSKTMISEVCTKEHEAVGMSTITACWSVGLVGGPGLGGLLSEPAKYYPRFFSESGLF----------------------PYLLPNLVGACIALSALLMVFFFLHETKP--TQSSRSGYRSVKFKGRNCCALIATDRHGAYGLSP---EGGDSN-AHEEEEEEKNDVGSAFWAECLVPIRLLAERNVRLILLVYGLVSYPLQSILVNVSYVCLQFTKIGADEVYPLWALSTVASGGLDWTTNEIGKCLSIAGLAVLVFQMVVYPRIIKAVSIQSSQRISSFVSVPLFLAAP 1042
AGFYAGYV+SA FGRF S Y WG D GR PV+ + L SI + + FG STS+ WA++SR +LG+ NG++ + ++EVC +H VGM+ + +C ++ +V G G+GG+L++PA +YP FS +GLF P+LLPNLVGA AL +++V +L ETK T +++ + + T + G S G D+N A +E + G++ + E I +GL++ P L+ + V + +IG DE YPL+ALST GGL W T +IGK L + GL + FQ+++ P +IK V I QR+ V F+A P
Sbjct: 76 AGFYAGYVASAFTFGRFLSGYAWGHVTDSAGRKPVIVLGLMSIIIFSLTFGLSTSYAWAVSSRLILGLTNGIMAALRVSLNEVCGPKHVLVGMNYLNSCRAISMVVGTGVGGVLAQPAVHYPSLFSATGLFGRWAKNPKRRRLRLMFFPRSRYPFLLPNLVGASCALVIMVLVIIYLPETKDYATIAAQRAFLQQQQXXXXXXXXXHTSDGVSNGCSEAMANGADNNRASRDEPPPSSPTGAS-------DVDDKGEEEEIGIFGRHGLLATPHVKTLLTLGCVVMAL-QIGFDEAYPLFALSTPDVGGLGWNTLQIGKVLVMTGLFMACFQLLLLPPLIKVVGITKWQRVGFCVGALAFIAIP 431
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Match: A0A6H5KX19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX19_9PHAE) HSP 1 Score: 195 bits (496), Expect = 1.120e-52 Identity = 102/169 (60.36%), Postives = 120/169 (71.01%), Query Frame = 2
Query: 35 AGFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCSIAVLGIAFGFSTSFYWAIASRFLLGVMNGVVGTSKTMISEVCTKEHEAVGMSTITACWSVGLVGGPGLGGLLSEPAKYYPRFFSESGLF---PYLLPNLVGACIALSALLMVFFFLHETKPTQSSRS 532
AG+YAG ++SA M GRF +S AD YGRLPV+YI L SI VL +AFG ST+F+WA+ RFLLG MN ++G SK MISE+C K+HE VGM +T C S GLV GP GGLL++PA +YP FSESGLF PYLLPN+VGA IA S L MVFFFL ET RS
Sbjct: 115 AGYYAGCLASAFMVGRFATSXXXXXXADRYGRLPVVYIGLSSIGVLSLAFGLSTAFWWALTCRFLLGAMNALMGISKCMISEICGKQHETVGMGYVTGCSSFGLVIGPAFGGLLAQPATHYPNVFSESGLFGRYPYLLPNVVGASIAFSGLPMVFFFLKETLNLDDGRS 283
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Match: B8LP10_PICSI (MFS domain-containing protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=B8LP10_PICSI) HSP 1 Score: 189 bits (479), Expect = 1.620e-51 Identity = 123/357 (34.45%), Postives = 185/357 (51.82%), Query Frame = 2
Query: 38 GFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCSIAVLGIAFGFSTSFYWAIASRFLLGVMNGVVGTSKTMISEVCTKEHEAVGMSTITACWSVGLVGGPGLGGLLSEPAKYYPRFFSESGLF---PYLLPNLVGACIALSALLMVFFFLHET---KPTQSSRSGYRSVKFKGRNCCALIATDRHGAYGLSPEGGDSNAHEEEEEEKNDVGSAFWAECLVPIRLLAERNVRLILLVYGLVSYPLQSILVNVSYVCLQFTKIGADEVYPLWALSTVASGGLDWTTNEIGKCLSIAGLAVLVFQMVVYPRIIKAVSIQSSQRISSFVSVPLFLAAPLISLFHDKGWMLIAVN 1090
G+YAGY+ S+ MFGRF +S WG AD YGR P+M I + S+ V FG STSF+ A++ RFLLG NG++G K SE+C EH+A+G+S + W +GL+ GP LGG ++PA YP+ F ++ LF PYLLP L + IAL +L+ F+L ET P + G ++F G N ++ G E++K + S F RN +P+ S ++ Y ++ E++ LWA S A GGL +TT +G LSI G+ VL+FQ++++P I RI++ +S+P+ P IS+ G++ + +N
Sbjct: 79 GYYAGYIGSSFMFGRFLTSALWGMAADKYGRKPIMIIGVSSVIVFNTLFGMSTSFWMAVSMRFLLGSFNGMLGPVKAYASEICRDEHQALGLSVVGTMWGIGLIIGPALGGFFAQPADKYPKIFPKNSLFGRFPYLLPCLCISVIAL-VVLVTTFWLPETLHRHPLECEEKGDDDLEFSGPNSIK----EKDGQI--------------MEKQKVNRKSLF-------------RN------------WPVMSSII--VYCVFSLHEVAYSEIFSLWAESPKAYGGLGFTTTNVGTVLSITGVGVLIFQLLIFPSIANFTGAILITRIAAVLSIPVLACYPFISMLSG-GFLWLVIN 388
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Match: D7G0M0_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M0_ECTSI) HSP 1 Score: 190 bits (482), Expect = 1.700e-51 Identity = 142/399 (35.59%), Postives = 203/399 (50.88%), Query Frame = 2
Query: 38 GFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCSIAVLGIAFGFSTSFYWAIASRFLLGVMNGVVGTSKTMISEVCTKEHEAVGMSTITACWSVGLVGGPGLGGLLSEPAKYYPRFFSESGLF---PYLLPNLVGACIALSALLMVFFFLHETKP--------------------TQSSRSGYRSVKFKGRNCCALIATD---------------RHGAYGLSPEGGDSNAHEEEE-----------------------EEKNDVGSAFWAECLVPIRLLAERN--VRLILLVYGLVSYPLQSILVNVSYVCLQFT-KIGADEVYPLWALSTVASGGLDWTTNEIGKCLSIAGLAVLVFQMVVYPRIIKAVSIQSSQRISSFVSVPLFLAAP 1042
GFYAGYV+S+ FGRF S Y WG D GR PV+ I L SI + + FG S ++ AI +RF+LG+ NG++ +T +SEVC EH +GM+ I+ ++ +V G G+GGLL++PA +YP FS +GLF P+LLPNLVGA +++ AL +V F+L ETK + S+ G S K G + A+ +T+ G P G D + E+ E EK GS + C AE+ + + GL++ P +++ + C+ T IG DEVYPL+ALST + GGL W T +IG+ + +AGL + V Q+V++P IK V I QR+ V V FLA P
Sbjct: 32 GFYAGYVASSFTFGRFLSGYVWGSATDIIGRKPVIIIGLLSITIFSMIFGMSETYSMAITTRFILGLTNGIMPALRTSLSEVCGPEHVVLGMTYISGTRAISMVIGTGIGGLLAQPALHYPTVFSPTGLFAMYPFLLPNLVGAVLSVFALFLVIFYLPETKDYNKRRFSRDSVRTASTDPRRSPSASPGRSSRKNCGSSTSAINSTNPTESPSLHLQQXXXXXXGRQKKLPYGADIDRREKGEGAPLYQHLSQEPLAGDASFPASAAEKTTDGSKS-STCATDELSAAEQGDEEQGLFGPGGLLARPHVKLVLFLG--CIIATLAIGFDEVYPLYALSTPSVGGLGWNTVQIGQVMVVAGLLLAVCQLVLFPPFIKMVGITYFQRLGCGVGVAAFLAVP 427
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Match: A0A8B9A1Y5_PHODC (probable peptide/nitrate transporter At3g43790 isoform X4 n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9A1Y5_PHODC) HSP 1 Score: 185 bits (470), Expect = 1.200e-50 Identity = 119/341 (34.90%), Postives = 182/341 (53.37%), Query Frame = 2
Query: 38 GFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCSIAVLGIAFGFSTSFYWAIASRFLLGVMNGVVGTSKTMISEVCTKEHEAVGMSTITACWSVGLVGGPGLGGLLSEPAKYYPRFFSESGLF---PYLLPNLVGACIALSALLMVFFF---LHETKPTQSSRSGYRSVKFKGRNCCALIATDRHGAYGLSPEGGDSNAHEEEEEEKNDVGSAFWAECLVPIRLLAERNVRLILLVYGLVSYPLQSILVNVSYVCLQFTKIGADEVYPLWALSTVASGGLDWTTNEIGKCLSIAGLAVLVFQMVVYPRIIKAVSIQSSQRISSFVSVPLFLAAP 1042
GFYAG+V SA MFGR +S FWG AD YGR PV+ IS+ S+ V FG STS+ AI +R LLG + G++G K SEVC KEH+A+G+S ++ +GL+ GP +GG L++PA+ YP FSE LF PY LP L + A+ A + F+ LH K S++ +LI G D + EE E I L + +N+ L ++PL S ++ Y + E++ LWA+S+ GGL +++ ++G+ L+I G ++LV+Q+++YPR +K + +S R+++ +S+PL + P
Sbjct: 48 GFYAGFVGSAFMFGRALTSVFWGMVADRYGRKPVIVISIVSVIVFNTLFGLSTSYVMAITTRSLLGFLCGLLGPVKAYASEVCRKEHQALGLSLVSTSRGIGLIVGPAIGGFLAQPAEKYPNIFSEDSLFGRFPYFLPCLCISLFAVGAFIACFWLPETLHMHKGNSLGDGTVESLE------ASLI-------------GSDLKRNSEETE---------------GIELASNKNL--------LKNWPLISSII--VYCVFSLQDMAYSEIFSLWAVSSKRYGGLSFSSQDVGEVLAITGFSLLVYQLLLYPRFVKCLGHITSTRVAAVLSIPLLASYP 344
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Match: D8LJK9_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK9_ECTSI) HSP 1 Score: 186 bits (473), Expect = 1.480e-50 Identity = 137/372 (36.83%), Postives = 192/372 (51.61%), Query Frame = 2
Query: 29 PCAGFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCSIAVLGIAFGFSTSFYWAIASRFLLGVMNGVVGTSKTMISEVC-TKEHEAVGMSTITACWSVGLVGGPGLGGLLSEPAKYYPRFFSESGLF---PYLLPNLVGACIALSALLMVFFFLHETKPTQSSRS--------GYRSVKFKGRNCCALIATDRHGAYGLSP-----------EGGDSNAHEEEEEEK--NDVGS-AFWAECLVPIR---LLAERNVRLILLVYGLVSYPLQSILVNVSYVCLQFTKIGADEVYPLWALSTVASGGLDWTTNEIGKCLSIAGLAVLVFQMVVYPRIIKAVSIQSSQRISSFVSVPLFLAAPLISLF 1057
P GFYAGYV+ A GRF S Y WG +D GR PV+ + L + AVL + FG ST++ AI+SRF+LG+MNG+ +T + EVC T H M+ I + +V G +GGLL +P +YP FS +GLF P+LLPNLVG +AL L V ++ ETK + +RS + RH A P E GD +A +E +E + ND G A E + R + + R + + GL+S P L+ + V +Q G +EV+PLWALSTV GGLDW T EIGK L ++G ++V Q+ ++P +IK + + R + + FLA P LF
Sbjct: 4 PHTGFYAGYVAGAFTLGRFLSGYLWGYVSDSVGRRPVILVGLSATAVLSLTFGLSTTYEVAISSRFVLGIMNGITPAVRTTVYEVCGTNSHVVQAMAYIDGARASTIVFGSAMGGLLVQPVDHYPSVFSATGLFGRFPFLLPNLVGMGVALLLLPTVIAYVPETKDFEKTRSRSXXXXXXXXXXXXXXXXXXXXXXSPARHRAVARHPPQGGKLAYRSLEDGDVSAQQEAQETRGVNDSGGRAKHKEGGLHAREPPVTSNREEQGLCGPGGLLSVPRVKPLLFLVCV-VQSLLAGFEEVFPLWALSTVGVGGLDWGTMEIGKVLFLSGCIMVVAQVFIFPSVIKILGAVTWMRTGCLLGICTFLATPNAKLF 374 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8922.16423.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8922.16423.1 >prot_H-elongata_contig8922.16423.1 ID=prot_H-elongata_contig8922.16423.1|Name=mRNA_H-elongata_contig8922.16423.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=380bp MYSPLYGPCAGFYAGYVSSAIMFGRFGSSYFWGRFADHYGRLPVMYISLCback to top mRNA from alignment at H-elongata_contig8922:48..2865+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8922.16423.1 ID=mRNA_H-elongata_contig8922.16423.1|Name=mRNA_H-elongata_contig8922.16423.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2818bp|location=Sequence derived from alignment at H-elongata_contig8922:48..2865+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8922:48..2865+ >mRNA_H-elongata_contig8922.16423.1 ID=mRNA_H-elongata_contig8922.16423.1|Name=mRNA_H-elongata_contig8922.16423.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2280bp|location=Sequence derived from alignment at H-elongata_contig8922:48..2865+ (Himanthalia elongata Himel1 dioecious)back to top |