mRNA_H-elongata_contig89073.16412.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig89073.16412.1
Unique NamemRNA_H-elongata_contig89073.16412.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Match: D7FXD6_ECTSI (Serine/threonine-protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD6_ECTSI)

HSP 1 Score: 275 bits (704), Expect = 2.540e-91
Identity = 129/137 (94.16%), Postives = 132/137 (96.35%), Query Frame = 1 
Query:    1 NNVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHNSVETFQMLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ 411
            NNVQLVRSPVTICG IHGQF  LLELL MGG+VP TSYIFMGDFVDRGHNSVETFQ+LMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPE+RTIDQ
Sbjct:   35 NNVQLVRSPVTICGDIHGQFYDLLELLAMGGKVPDTSYIFMGDFVDRGHNSVETFQLLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEIRTIDQ 171
[Close]
BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Match: W4H4C7_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H4C7_9STRA)

HSP 1 Score: 244 bits (622), Expect = 9.500e-80
Identity = 107/137 (78.10%), Postives = 127/137 (92.70%), Query Frame = 1 
Query:    1 NNVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHNSVETFQMLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ 411
            +NVQLV SPVT+CG IHGQF  LLEL ++GG +P+T+Y+FMGDFVDRGHNSVETF+ML+ LKARYPD +TLLRGNHESRQ+TQVYGFYEEC+RKYGNANPWKYC +VFD+LNLAA++D +VLCVHGGLSPE+RT+DQ
Sbjct:   37 SNVQLVSSPVTVCGDIHGQFYDLLELFRVGGELPTTNYVFMGDFVDRGHNSVETFEMLLCLKARYPDRITLLRGNHESRQVTQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGKVLCVHGGLSPEIRTLDQ 173
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BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Match: A0A024UH92_9STRA (Serine/threonine-protein phosphatase n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024UH92_9STRA)

HSP 1 Score: 244 bits (622), Expect = 7.090e-79
Identity = 107/137 (78.10%), Postives = 127/137 (92.70%), Query Frame = 1 
Query:    1 NNVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHNSVETFQMLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ 411
            +NVQLV SPVT+CG IHGQF  LLEL ++GG +P+T+Y+FMGDFVDRGHNSVETF+ML+ LKARYPD +TLLRGNHESRQ+TQVYGFYEEC+RKYGNANPWKYC +VFD+LNLAA++D +VLCVHGGLSPE+RT+DQ
Sbjct:   37 SNVQLVSSPVTVCGDIHGQFYDLLELFRVGGELPTTNYVFMGDFVDRGHNSVETFEMLLCLKARYPDRITLLRGNHESRQVTQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGKVLCVHGGLSPEIRTLDQ 173
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BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Match: W7TS65_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS65_9STRA)

HSP 1 Score: 239 bits (609), Expect = 6.430e-77
Identity = 110/136 (80.88%), Postives = 120/136 (88.24%), Query Frame = 1 
Query:    4 NVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHNSVETFQMLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ 411
            NVQ VRSPVT+CG IHGQF  LL+L   GG VP TSYIFMGDFVDRGHNSVET  +L+ LKARYP  MTLLRGNHESRQITQVYGFYEECMRKYGNAN WKYCV+VFD+LNLAAL+D +VLCVHGGLSPE+RT+DQ
Sbjct:   36 NVQPVRSPVTVCGDIHGQFFDLLKLFACGGEVPQTSYIFMGDFVDRGHNSVETLTLLLCLKARYPQNMTLLRGNHESRQITQVYGFYEECMRKYGNANAWKYCVDVFDYLNLAALIDGQVLCVHGGLSPEIRTVDQ 171
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BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Match: A0A835ZDV3_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDV3_9STRA)

HSP 1 Score: 236 bits (602), Expect = 8.370e-76
Identity = 107/137 (78.10%), Postives = 119/137 (86.86%), Query Frame = 1 
Query:    1 NNVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHNSVETFQMLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ 411
            N V  V SPVT+CG IHGQF  LLELL+ GG +P TSYIFMGDFVDRGHNSVETF++LM LKAR+PD +TLLRGNHESRQITQVYGFYEECMRKYGNANPW+YC  VFDHL+LAAL+D   LCVHGGLSPE+R +DQ
Sbjct:   38 NTVHPVASPVTVCGDIHGQFYDLLELLRTGGELPGTSYIFMGDFVDRGHNSVETFELLMCLKARWPDRVTLLRGNHESRQITQVYGFYEECMRKYGNANPWRYCTNVFDHLSLAALIDGRALCVHGGLSPEIRCLDQ 174
[Close]
BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Match: A0A1V9ZA30_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZA30_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.530e-75
Identity = 102/137 (74.45%), Postives = 124/137 (90.51%), Query Frame = 1 
Query:    1 NNVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHNSVETFQMLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ 411
            +NVQ V SPVT+CG IHGQF  LLEL ++GG +P+T+Y+FMGDFVDRG+NSVETF++L+ LKARYPD +TLLRGNHESRQ+TQVYGFYEEC+RKYGNANPWKYC +VFD+LNLAA++D  +LCVHGGLSPE+ T+DQ
Sbjct:   37 SNVQAVSSPVTVCGDIHGQFYDLLELFRVGGELPTTNYVFMGDFVDRGNNSVETFELLLCLKARYPDRITLLRGNHESRQVTQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGRILCVHGGLSPEIHTLDQ 173
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BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Match: K3X097_GLOUD (Serine/threonine-protein phosphatase n=4 Tax=Pythiaceae TaxID=4782 RepID=K3X097_GLOUD)

HSP 1 Score: 235 bits (600), Expect = 2.580e-75
Identity = 105/137 (76.64%), Postives = 122/137 (89.05%), Query Frame = 1 
Query:    1 NNVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHNSVETFQMLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ 411
            +NV  V SPVT+CG IHGQF  LLEL + GG VP+T+YIFMGDFVDRGHNSVETF++L+ LKA+YPD +TLLRGNHE RQITQVYGFYEEC+RKYGNANPWKYC +VFD+LNLAA++D  VLCVHGGLSPE+RT+DQ
Sbjct:   54 SNVVAVSSPVTVCGDIHGQFFDLLELFRCGGEVPNTNYIFMGDFVDRGHNSVETFELLLCLKAQYPDRITLLRGNHECRQITQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGRVLCVHGGLSPEIRTLDQ 190
[Close]
BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Match: F0WDQ3_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Albugo TaxID=65356 RepID=F0WDQ3_9STRA)

HSP 1 Score: 234 bits (597), Expect = 5.020e-74
Identity = 104/137 (75.91%), Postives = 121/137 (88.32%), Query Frame = 1 
Query:    1 NNVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHNSVETFQMLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ 411
            +NVQ V SPVT+CG IHGQF  LLEL + GG +  T+YIFMGDFVDRGHNSVETF++L+ LKARYPD +TLLRGNHE RQITQVYGFYEEC+RKYGNANPWKYC +VFD+LNLAA++D  +LCVHGGLSPE+RT+DQ
Sbjct:  120 SNVQPVTSPVTVCGDIHGQFFDLLELFRSGGNITHTNYIFMGDFVDRGHNSVETFELLLCLKARYPDRITLLRGNHECRQITQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGRILCVHGGLSPEIRTLDQ 256
[Close]
BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Match: M4BZB8_HYAAE (Serine/threonine-protein phosphatase n=24 Tax=Peronosporaceae TaxID=4777 RepID=M4BZB8_HYAAE)

HSP 1 Score: 232 bits (591), Expect = 5.760e-74
Identity = 104/137 (75.91%), Postives = 120/137 (87.59%), Query Frame = 1 
Query:    1 NNVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHNSVETFQMLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ 411
            +NVQ V SPVT+CG IHGQF  LLEL + GG +  T+YIFMGDFVDRGHNSVETF++L+ LK RYPD +TLLRGNHE RQITQVYGFYEEC+RKYGNANPWKYC +VFD+LNLAA++D  VLCVHGGLSPE+RT+DQ
Sbjct:   54 SNVQPVSSPVTVCGDIHGQFFDLLELFRCGGDIRDTNYIFMGDFVDRGHNSVETFELLLCLKVRYPDRITLLRGNHECRQITQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAIIDGRVLCVHGGLSPELRTLDQ 190
[Close]
BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Match: A0A6A4Z1Q2_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z1Q2_9STRA)

HSP 1 Score: 231 bits (589), Expect = 1.510e-73
Identity = 107/159 (67.30%), Postives = 127/159 (79.87%), Query Frame = 1 
Query:    1 NNVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHNSVETFQMLMALKAR----------------------YPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANPWKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ 411
            +NVQLV SPVT+CG IHGQF  LLEL ++GG +P+T+Y+FMGDFVDRGHNSVETF+ML+ LKAR                      YPD +TLLRGNHESRQ+TQVYGFYEEC+RKYGNANPWKYC +VFD+LNLAA++D +VLCVHGGLSPE+RT+DQ
Sbjct:   37 SNVQLVSSPVTVCGDIHGQFYDLLELFRVGGELPTTNYVFMGDFVDRGHNSVETFEMLLCLKARSDSPPQPRCLKGSCGTSTLSCRYPDRITLLRGNHESRQVTQVYGFYEECVRKYGNANPWKYCTDVFDYLNLAAVIDGKVLCVHGGLSPEIRTLDQ 195
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig89073.16412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXD6_ECTSI2.540e-9194.16Serine/threonine-protein phosphatase n=2 Tax=Ectoc... [more]
W4H4C7_9STRA9.500e-8078.10Serine/threonine-protein phosphatase n=1 Tax=Aphan... [more]
A0A024UH92_9STRA7.090e-7978.10Serine/threonine-protein phosphatase n=6 Tax=Sapro... [more]
W7TS65_9STRA6.430e-7780.88Serine/threonine-protein phosphatase n=2 Tax=Monod... [more]
A0A835ZDV3_9STRA8.370e-7678.10Serine/threonine-protein phosphatase n=1 Tax=Tribo... [more]
A0A1V9ZA30_9STRA1.530e-7574.45Serine/threonine-protein phosphatase n=1 Tax=Achly... [more]
K3X097_GLOUD2.580e-7576.64Serine/threonine-protein phosphatase n=4 Tax=Pythi... [more]
F0WDQ3_9STRA5.020e-7475.91Serine/threonine-protein phosphatase n=2 Tax=Albug... [more]
M4BZB8_HYAAE5.760e-7475.91Serine/threonine-protein phosphatase n=24 Tax=Pero... [more]
A0A6A4Z1Q2_9STRA1.510e-7367.30Serine/threonine-protein phosphatase n=1 Tax=Aphan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig89073contigH-elongata_contig89073:1..1455 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score278.9
Seed ortholog evalue1.3e-72
Seed eggNOG ortholog2880.D7FXD6
Preferred namePPP6C
KEGG koko:K01090,ko:K15423,ko:K15427,ko:K15498
KEGG Pathwayko04922,map04922
GOsGO:0000082,GO:0000159,GO:0000226,GO:0000228,GO:0000235,GO:0000278,GO:0000785,GO:0000790,GO:0001302,GO:0001932,GO:0001933,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004721,GO:0004722,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005818,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005876,GO:0005881,GO:0005938,GO:0006139,GO:0006140,GO:0006259,GO:0006281,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006468,GO:0006470,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007088,GO:0007154,GO:0007163,GO:0007165,GO:0007275,GO:0007346,GO:0007568,GO:0007569,GO:0007623,GO:0008033,GO:0008150,GO:0008152,GO:0008287,GO:0008360,GO:0009266,GO:0009268,GO:0009314,GO:0009405,GO:0009408,GO:0009416,GO:0009451,GO:0009605,GO:0009607,GO:0009628,GO:0009648,GO:0009649,GO:0009790,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009909,GO:0009910,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010562,GO:0010563,GO:0010564,GO:0010570,GO:0010605,GO:0010639,GO:0010646,GO:0010648,GO:0010948,GO:0015630,GO:0016043,GO:0016050,GO:0016070,GO:0016192,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0019216,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0019747,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022603,GO:0022604,GO:0022607,GO:0023051,GO:0023052,GO:0023057,GO:0030029,GO:0030036,GO:0030447,GO:0030588,GO:0030590,GO:0030865,GO:0030866,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031399,GO:0031400,GO:0031505,GO:0031667,GO:0031929,GO:0031974,GO:0031981,GO:0032101,GO:0032103,GO:0032104,GO:0032106,GO:0032107,GO:0032109,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032872,GO:0032873,GO:0032922,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0033554,GO:0034248,GO:0034250,GO:0034470,GO:0034599,GO:0034641,GO:0034660,GO:0035556,GO:0036168,GO:0036170,GO:0036171,GO:0036176,GO:0036177,GO:0036178,GO:0036180,GO:0036211,GO:0036244,GO:0040001,GO:0040007,GO:0040008,GO:0042221,GO:0042325,GO:0042326,GO:0042578,GO:0042594,GO:0042752,GO:0042762,GO:0043085,GO:0043153,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043408,GO:0043409,GO:0043412,GO:0043933,GO:0044085,GO:0044093,GO:0044182,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044843,GO:0045229,GO:0045786,GO:0045828,GO:0045834,GO:0045839,GO:0045927,GO:0045930,GO:0045935,GO:0045936,GO:0045937,GO:0045981,GO:0046328,GO:0046329,GO:0046483,GO:0046889,GO:0046890,GO:0046907,GO:0047485,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048511,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048585,GO:0048831,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051176,GO:0051179,GO:0051193,GO:0051194,GO:0051196,GO:0051197,GO:0051234,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051293,GO:0051341,GO:0051353,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051656,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0060255,GO:0061024,GO:0062012,GO:0062013,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070262,GO:0070302,GO:0070303,GO:0070887,GO:0071071,GO:0071073,GO:0071214,GO:0071467,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071944,GO:0071963,GO:0072357,GO:0080090,GO:0080134,GO:0080135,GO:0090033,GO:0090114,GO:0090304,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0099568,GO:0104004,GO:0140096,GO:1900428,GO:1900430,GO:1900434,GO:1900436,GO:1900437,GO:1900439,GO:1900440,GO:1900442,GO:1900486,GO:1900490,GO:1900542,GO:1900544,GO:1900741,GO:1900743,GO:1901360,GO:1901564,GO:1902494,GO:1902531,GO:1902532,GO:1902850,GO:1903047,GO:1903293,GO:1903725,GO:1903727,GO:2000026,GO:2000241,GO:2000242,GO:2001210,GO:2001215,GO:2001251
EggNOG free text desc.phosphoprotein phosphatase activity
EggNOG OGsCOG0639@1,KOG0373@2759
Ec32 ortholog descriptionProtein phosphatase 2A catalytic subunit C
Ec32 orthologEc-23_000740.1
EC3.1.3.16
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009,ko03016,ko03400
Hectar predicted targeting categoryother localisation
Exons3
Model size411
Cds size411
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig89073.16412.1prot_H-elongata_contig89073.16412.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig89073 1..1455 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931291.6516726-CDS-H-elongata_contig89073:0..1231622931291.6516726-CDS-H-elongata_contig89073:0..123Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89073 1..123 +
1691679776.2135377-CDS-H-elongata_contig89073:0..1231691679776.2135377-CDS-H-elongata_contig89073:0..123Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89073 1..123 +
1622931291.6656702-CDS-H-elongata_contig89073:662..7881622931291.6656702-CDS-H-elongata_contig89073:662..788Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89073 663..788 +
1691679776.2251592-CDS-H-elongata_contig89073:662..7881691679776.2251592-CDS-H-elongata_contig89073:662..788Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89073 663..788 +
1622931291.682588-CDS-H-elongata_contig89073:1293..14551622931291.682588-CDS-H-elongata_contig89073:1293..1455Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89073 1294..1455 +
1691679776.2334175-CDS-H-elongata_contig89073:1293..14551691679776.2334175-CDS-H-elongata_contig89073:1293..1455Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig89073 1294..1455 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig89073.16412.1

>prot_H-elongata_contig89073.16412.1 ID=prot_H-elongata_contig89073.16412.1|Name=mRNA_H-elongata_contig89073.16412.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=137bp
NNVQLVRSPVTICGHIHGQFDHLLELLKMGGRVPSTSYIFMGDFVDRGHN
SVETFQMLMALKARYPDCMTLLRGNHESRQITQVYGFYEECMRKYGNANP
WKYCVEVFDHLNLAALVDNEVLCVHGGLSPEVRTIDQ
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mRNA from alignment at H-elongata_contig89073:1..1455+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig89073.16412.1 ID=mRNA_H-elongata_contig89073.16412.1|Name=mRNA_H-elongata_contig89073.16412.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1455bp|location=Sequence derived from alignment at H-elongata_contig89073:1..1455+ (Himanthalia elongata Himel1 dioecious)
AACAACGTCCAGCTCGTGAGATCTCCGGTGACGATCTGTGGGCACATCCA
TGGGCAATTCGACCACCTGCTCGAACTGCTCAAAATGGGGGGCAGAGTTC
CCAGCACAAGTTATATATTCATGGTGAAAATGGTACCTAGGGCGCTGCGC
AAGCACGGGGGTGGGAGGGGGGGGTGCGCGGTCAGGAGCCGTTTTTTTTC
CCCACTAGCGCCGGATTGACTCGGCATCGGAGTGCTGTCGGGCGCTGTCT
TGGGGTTTCGAGTGAGGCGTTTTCGTTCACTCTTAGCAGTGTTTCTTTTT
TGCCCCTCAAGAATGCCGCGATCCTATAAAATGACGGAAGGAAAGAAGGG
CGGATGTTGCCGCAGGCGAGGTTGTTGGTACGTAATAGGTCGAGAATGCG
TTGAAGGAAGCACCCGTTGGCGCCATAGCTGACTTCTACTGACCTCTAGT
CTGTCAGTAATGGAGGGAAGAAGGAACACTTTCCTTGTTTTCGGTGTTTT
TCTGCTCTCGTCAACGCGGCGGGCTCGTTTAGGGAAACCATGGGGGGGGG
GGGGAATGAATACGCTGACGTCATTTTTATCCTTCTCTGTCCCTCTTCCT
GCCGCCGCCGCCTCTCTCCCCCTCTCCCCGTCCGCCCCTTCCCATTACAA
CTCCCTTGTAAGGGGGACTTTGTGGACAGGGGACACAATAGCGTGGAGAC
CTTCCAAATGTTAATGGCGCTGAAGGCGCGATATCCGGACTGTATGACGT
TGCTGCGGGGTAATCACGAGTCGAGACAGATTACGCAGGTAGATTATTGA
GAGGGCATCATACCATGGAAGTATCATGAAATAGGGTTCTCTTGTTTGCA
GGGGATAGGTGGGGGGAGGGGTAGGCTCTACCTTTGAAGTTTCGCGTTAC
GGTGCGAAAACATAAGGGATGCGTAAACCCTCGCAACACAGCCACAAGCA
CACACACACACACACACACACACACACACGCGCGGTTGGAGAGGGATAAA
ACGGAGACCGTGTCTGCGCGGCCTCTGCATACAGTCACTTCACCCACCAA
GCTTCGAGGTGCCAGCTAGCTTGGTTAAATCGTAAAATGCCCGCCCAGCA
CGCCGGTTTGCCGCCTTTAATCCACGCGTCCTTCTCTGCCTCTCAACCGT
TGCACCCATCTATCCGCACACTCCCGAACGCCGACGCTCCTGCACGCACG
TTCCATATCTTCACAGTGTATTCCGTTTATCGTGCCACGCCCGTCGTACC
ATCCCCATCTGTGCACGCCGCATTCCGGCGACCCCGACCCCAGGTTTACG
GGTTCTACGAGGAATGCATGCGCAAATACGGGAATGCAAACCCTTGGAAG
TATTGTGTGGAGGTGTTCGACCACCTCAACCTGGCCGCGCTTGTGGACAA
CGAGGTGCTGTGCGTCCATGGAGGTCTGTCTCCGGAGGTTCGAACGATCG
ACCAG
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Coding sequence (CDS) from alignment at H-elongata_contig89073:1..1455+

>mRNA_H-elongata_contig89073.16412.1 ID=mRNA_H-elongata_contig89073.16412.1|Name=mRNA_H-elongata_contig89073.16412.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=822bp|location=Sequence derived from alignment at H-elongata_contig89073:1..1455+ (Himanthalia elongata Himel1 dioecious)
AACAACGTCCAGCTCGTGAGATCTCCGGTGACGATCTGTGGGCACATCCA
TGGGCAATTCGACCACCTGCTCGAACTGCTCAAAATGGGGGGCAGAGTTC
CCAGCACAAGTTATATATTCATGAACAACGTCCAGCTCGTGAGATCTCCG
GTGACGATCTGTGGGCACATCCATGGGCAATTCGACCACCTGCTCGAACT
GCTCAAAATGGGGGGCAGAGTTCCCAGCACAAGTTATATATTCATGGGGG
ACTTTGTGGACAGGGGACACAATAGCGTGGAGACCTTCCAAATGTTAATG
GCGCTGAAGGCGCGATATCCGGACTGTATGACGTTGCTGCGGGGTAATCA
CGAGTCGAGACAGATTACGCAGGGGGACTTTGTGGACAGGGGACACAATA
GCGTGGAGACCTTCCAAATGTTAATGGCGCTGAAGGCGCGATATCCGGAC
TGTATGACGTTGCTGCGGGGTAATCACGAGTCGAGACAGATTACGCAGGT
TTACGGGTTCTACGAGGAATGCATGCGCAAATACGGGAATGCAAACCCTT
GGAAGTATTGTGTGGAGGTGTTCGACCACCTCAACCTGGCCGCGCTTGTG
GACAACGAGGTGCTGTGCGTCCATGGAGGTCTGTCTCCGGAGGTTCGAAC
GATCGACCAGGTTTACGGGTTCTACGAGGAATGCATGCGCAAATACGGGA
ATGCAAACCCTTGGAAGTATTGTGTGGAGGTGTTCGACCACCTCAACCTG
GCCGCGCTTGTGGACAACGAGGTGCTGTGCGTCCATGGAGGTCTGTCTCC
GGAGGTTCGAACGATCGACCAG
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