mRNA_H-elongata_contig8842.16368.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Match: D7FRH8_ECTSI (Signal peptide peptidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH8_ECTSI) HSP 1 Score: 608 bits (1567), Expect = 1.800e-207 Identity = 347/617 (56.24%), Postives = 428/617 (69.37%), Query Frame = 2
Query: 2 DAVDALEMASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKK--GEGSGGEGR---KFTVAVTDTFGEGGPAMGEYFIASAFEKILMQKTGFVGLTGLGSQQLFLKGFFDKYGIKPEVFAREEYKSFAETLTNKTYSEPNREAVTFLLNGMLDHIADAIAQSRGLEGSEAVRAIMNKCPLPAKEALDARLIDGIMYPYNVDRMVKRFIMMPTLQLE----AAASDQALPTDTDHAEGDASATCS--------RVSMTDYIKAMRTREAN-----VQEIPDG--------DKYVAVMNLTGTIVRHADAQEG-----SITSSTLCERLRKVSEDKSIGAVVLRIDSGGGSAVASDSIAAAVQRVREAGKPVVCSMGNVAASGGYMIASACDTIVAQPTTITGSIGVVSLKLSIERLLNDWGIEVDNIELSENVLASSPFQELTPKQRSLMDKRVGDIYEDFVSRVAEGRKLPVEQVLKHAKGRIWTGQQAKERGLVDELGGLNSAIAIAKKTAGLPEEALAVSTFPVKPTLKQIFKRFRETGDVTELENFDGVRGVVIAVAQALFGEETIHSMHGAIELLASVNDVANGRSPRTSPNGGLRELELD 1747
D VDALEMA+KD++V+GVLGRFSYRSW AC+QE+RDAV +FRE+ +A GEG+ +GR +FT+AV DTFGEGGPA+GEYF+ASAFEK+L+QKTG+VGLTG G Q+LF +GF DKYGIKPEVFAREEYKS AE+L K YS REA+T LL MLD +AD +A SRG + + V AIM+ CPLPA AL A LIDGIMY +V+ MVK T E A + L T D +E + +T + RVSM DYI+ MR A+ +PD K VA++N G I R AD G TSS LC+RL++V +D SIGAVVLR+DS GGSAVASDSIAAAV+RVR AGKPVVCSMG++AASGGYMIA+ACDTIVAQPTTITGSIGV++ KLS++RLL WGI+VD+IELSEN LA SP QE +P+QRSLM+KRVG+IYEDFV VA GR + V++VLK AKGR+WTG+QA +RGLVDELGGLN AIAIAKK GLPE+A V + +L Q F G + E+ GVR + A+A A+ G + + ++ + LLAS ND+A G+ P G +LE+D
Sbjct: 5 DVVDALEMAAKDNKVRGVLGRFSYRSWGGGYLACVQEVRDAVTRFREAGSDASATAGEGAEADGRQRKRFTIAVADTFGEGGPAVGEYFLASAFEKVLVQKTGYVGLTGSGGQKLFFRGFLDKYGIKPEVFAREEYKSAAESLVRKAYSPHEREAMTSLLTSMLDDVADGVAASRGFKDRKDVYAIMHDCPLPATLALSANLIDGIMYEDDVESMVKAGFKKQTADAENDATAGEKIELLKTSVDESEDNVLSTFADSEESKYTRVSMRDYIEKMRKDRASEGVLDTNMLPDSAKGAKNPAPKNVALVNANGAITRFADPGVGPGSTEQATSSALCKRLQEVIDDPSIGAVVLRVDSPGGSAVASDSIAAAVRRVRLAGKPVVCSMGDLAASGGYMIAAACDTIVAQPTTITGSIGVIAAKLSVQRLLKAWGIQVDSIELSENHLAFSPLQEFSPQQRSLMEKRVGEIYEDFVGGVAAGRNMSVDEVLKVAKGRVWTGRQALDRGLVDELGGLNIAIAIAKKAGGLPEDARVVEA--ERRSLVQAATVFISGGGDSVTESTGGVRSAIFALAYAIVGVDAMEALFSTLSLLASANDLAKGKMPNERVRAGQGDLEID 619
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Match: A0A8J9RFS0_9CHLO (Protease 4 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RFS0_9CHLO) HSP 1 Score: 302 bits (773), Expect = 1.020e-88 Identity = 220/550 (40.00%), Postives = 294/550 (53.45%), Query Frame = 2
Query: 5 AVDALEMASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKKGEGSGGEGRKFTVAVTDTFGEGG-PAMGEYFIASAFEKILMQKTGFVGLTGLGSQQLFLKGFFDKYGIKPEVFAREEYKSFAETLTNKTYSEPNREAVTFLLNGMLDHIADAIAQSRGLEGSEAVRAIMNKCPLPAKEALDARLIDGIMY------PYNVDRMVKRFIMMPTLQLEAAASD--------------QALPTDT-DHAEGDASATCSRVSMTDYIKAMRTREANVQEIPDGDKYVAVMNLTGTIVRHADA-----QEGSITSSTLCERLRKVSEDKSIGAVVLRIDSGGGSAVASDSIAAAVQRVREAGKPVVCSMGNVAASGGYMIASACDTIVAQPTTITGSIGVVSLKLSIERLLNDWGIEVDNIELSENVLASSPFQELTPKQRSLMDKRVGDIYEDFVSRVAEGRKLPVEQVLKHAKGRIWTGQQAKERGLVDELGGLNSAIAIAKKTAGLPEEALAVSTFPVK---PTLKQIFKRFRETGDVT 1564
AV+AL +AS D+RVKGV+ F A +QELR+AV FRE A EGR TVA D FGE G Y++ASAF+K+ MQ +G + ++GL S FL+ FFD + +KP AREEYK+ T Y++ +R A LL G + I D IA SRGL +A RAI + P + EAL LID Y + +++ +R + L+ +AAA A P ++ D E D +A +R +A R R +A++ G+IV A Q I S+ +C++L D S+ AVV+RIDS GGSAVASD+I V R++EAGKPV+ SMGNVAASGGY I++ IVAQP+T+TGSIGVV K +I L +GI I +N A PF + T +Q L+++ V IY F+ +VA GR + +V K AKGR+W G+ A GLVD LGGL AI +AK AGLP E AV + P L QI K + GDV+
Sbjct: 83 AVEALRLASTDERVKGVIATFGANQRYQ-GLAQIQELRNAVTDFRERA-----------EGRVMTVAYADAFGEAGIGGTLSYYLASAFDKVYMQPSGLLSMSGLASSTPFLRRFFDSWKVKPHFVAREEYKNIINQFTQDNYTKEHRHATGTLLKGFVTDIIDGIAASRGLNQKQARRAI-DDAPFNSDEALAHGLIDDFKYRDEAEGTFGLEKRTRRIPIAKYLRAQAAAKGTNQEDPMTAAFNAMMAPPGESIDGTEQDEAAAAARAK-----RAERDRPV-----------IALITAVGSIVTGKGAVGELQQMQEIASTPMCKKLIDARLDPSVKAVVIRIDSPGGSAVASDTIYREVMRLKEAGKPVIVSMGNVAASGGYYISAPATKIVAQPSTVTGSIGVVFGKFNIAEALRQYGINPCTIAEGKNADAQFPFSDWTREQERLVNRLVDHIYSGFIRKVAAGRGMSEAEVRKIAKGRVWNGKDALAHGLVDCLGGLQDAIELAKTEAGLPLEEDAVVIRDMARPLPLLVQIVKMLKG-GDVS 602
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Match: A0A2N2K4L2_9DELT (Protease 4 n=2 Tax=unclassified Deltaproteobacteria TaxID=122706 RepID=A0A2N2K4L2_9DELT) HSP 1 Score: 296 bits (759), Expect = 1.270e-87 Identity = 197/539 (36.55%), Postives = 290/539 (53.80%), Query Frame = 2
Query: 2 DAVDALEMASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKKGEGSGGEGRKFTVAVTDTFGEGGPAMGEYFIASAFEKILMQKTGFVGLTGLGSQQLFLKGFFDKYGIKPEVFAREEYKSFAETLTNKTYSEPNREAVTFLLNGMLDHIADAIAQSRGLEGSEAVRAIMNKCPLPAKEALDARLIDGIMYPYNVDRMVKRFIMMPTLQLEAAASDQALPTDTDHAEGDASATCSRVSMTDYIKAMRTREANVQEIPDGDKYVAVMNLTGTIV----RHADAQEGSITSSTLCERLRKVSEDKSIGAVVLRIDSGGGSAVASDSIAAAVQRVREAGKPVVCSMGNVAASGGYMIASACDTIVAQPTTITGSIGVVSLKLSIERLLNDWGIEVDNIELSENVLASSPFQELTPKQRSLMDKRVGDIYEDFVSRVAEGRKLPVEQVLKHAKGRIWTGQQAKERGLVDELGGLNSAIAIAKKTAGLP-EEALAVSTFPVKPTL-KQIFKRFRETGDVTELENFDGVRGVV 1600
D V+ L MA++D +V ++ + + A +QE+RDAV +FR +A +A ++FGE GP Y++A+AF++I +Q +G +GLTG+G + FL+ +K GI+P++ AR+EYKS A TLT Y+EP+REA +L+ +L I + +AQSRGL E + ++ + P AK+AL L+DG+ Y V AE +A + + +Y+K R R G K VA++ G I R + S T+ R ++DKS+ A+V RIDS GGS VASD+I + GKPV+ SM +VA SGGY +A ACD I+A P TITGSIGVVS K+ N GI + + N S + +QR LM+ + +IY DFV + A+GRK+ +E + AKGRIWTG+ A ERGLVDELGGL+ AI AK+ A +P EE + + +P+K +L K++ R ++ LE ++GV+
Sbjct: 68 DVVEGLRMAAEDSKVTLLVAKVG---GSGMKMAKVQEIRDAVTRFRSKGKKA--------------IAYAESFGEFGPGSTSYYLATAFDRIYVQPSGNIGLTGMGMKTPFLRELVEKLGIEPQLGARKEYKSAAYTLTKSEYTEPHREADKAVLDSLLSQIVEGVAQSRGLS-PEKLMSLFDLGPFTAKQALQQGLVDGLAYRDEVRT---------------------------GAENEAGKGARFLGLPEYLKRKRRRST-------GKKKVAIIYGIGRIALGKSRSTPFGRFVMGSDTISAAFRSAAKDKSVKAIVFRIDSPGGSYVASDAIWRETICAKNGGKPVIASMSDVAGSGGYFVAMACDRIIAHPGTITGSIGVVSGKMVTSEFWNKLGIHWGGLYTNRNADFWSNTNRYSEEQRKLMESWLDEIYNDFVQKAADGRKMDIESMELAAKGRIWTGRDAMERGLVDELGGLDEAIRAAKEAANIPKEERVGLKAYPLKRSLLKRLTGSDRGDTHLSGLELLQELQGVL 554
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Match: A0A1W9MV50_9DELT (Protease 4 n=2 Tax=unclassified Desulfobacteraceae TaxID=231684 RepID=A0A1W9MV50_9DELT) HSP 1 Score: 294 bits (753), Expect = 1.400e-86 Identity = 196/548 (35.77%), Postives = 290/548 (52.92%), Query Frame = 2
Query: 2 DAVDALEMASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKKGEGSGGEGRKFTVAVTDTFGEGGPAMGEYFIASAFEKILMQKTGFVGLTGLGSQQLFLKGFFDKYGIKPEVFAREEYKSFAETLTNKTYSEPNREAVTFLLNGMLDHIADAIAQSRGLEGSEAVRAIMNKCPLPAKEALDARLIDGIMYPYNVDRMVKRFIMMPTLQLEAAASDQALPTDTDHAEGDASATCSRVSMTDYIKAMRTREANVQEIPDGDKYVAVMNLTGTIVRHADAQEGSITSS------TLCERLRKVSEDKSIGAVVLRIDSGGGSAVASDSIAAAVQRVREAGKPVVCSMGNVAASGGYMIASACDTIVAQPTTITGSIGVVSLKLSIERLLNDWGIEVDNIELSENVLASSPFQELTPKQRSLMDKRVGDIYEDFVSRVAEGRKLPVEQVLKHAKGRIWTGQQAKERGLVDELGGLNSAIAIAKKTAGLPEEA-LAVSTFPVKPTLKQI-FKRFRETGDVTELENFDGVRGVVIAVAQAL 1621
D ++ L+ ASKDDRV G++ + + FA +QE+R+AV FR+S A A +DTFGE G Y++ASAFEKI +Q +G VGL+GL + F+KG DK G+ P + R EYK+ T T Y+ P++EA+ ++ + + + IA R + SE VR + ++ KEALDA+L+D + Y R +++ A + +++++Y E + Q+ GD + + G VR + S++ S T+ R EDK + A++ R+DS GGS +ASD+I V R +EA KPV+ SMGNVA SGGY IA A D IVAQP TITGSIGV + K L+ G+ D + S+N + Q+ TP Q + + IYEDF + A+GR LP + V+K AKGRIWTGQ AK+ GLVDELGG N+A+ +AKK A LPE+ + + +P K + I R + GD ++ ++ V + + +A+
Sbjct: 73 DLIETLDAASKDDRVVGLIAKAGEAG---MGFAQIQEIREAVANFRKSGKPA--------------YAYSDTFGEFGAGNRSYYLASAFEKIYLQPSGDVGLSGLMFETQFIKGTLDKLGLVPRMGQRMEYKNAVNTFTQTQYTAPHKEALQAVMKSLFEQMVKDIAADRKMT-SEEVRTLADQGVFLGKEALDAKLVDNLGYRDEAYRDIRKR---------------------------AGIGVNLITVSEYSSRA---EEHYQD--KGDAIALIYGVGG--VRRGKSTYNSLSGSVSMGSDTVASAFRSAVEDKDVKAILFRVDSPGGSYIASDTIWREVIRAKEAKKPVIVSMGNVAGSGGYFIAMAADKIVAQPATITGSIGVFAGKFLTRGLMEKIGVSTDEVHTSQNSTLWTASQDYTPAQWKRIQSALDRIYEDFTDKAAQGRNLPKDMVMKVAKGRIWTGQDAKDNGLVDELGGFNTALRLAKKAANLPEDVKVRLKLYPEKKSFIDIVLNRESDIGDESDEDSMTKVIEEIQPIVRAV 568
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Match: A0A6I2GSK5_9DELT (Protease 4 n=1 Tax=Aggregicoccus sp. 17bor-14 TaxID=2583808 RepID=A0A6I2GSK5_9DELT) HSP 1 Score: 293 bits (749), Expect = 6.530e-86 Identity = 199/509 (39.10%), Postives = 283/509 (55.60%), Query Frame = 2
Query: 2 DAVDALEMASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKKGEGSGGEGRKFTVAVTDTFGEGGPAMGEYFIASAFEKILMQKTGFVGLTGLGSQQLFLKGFFDKYGIKPEVFAREEYKSFAETLTNKTYSEPNREAVTFLLNGMLDHIADAIAQSRGLEGSEAVRAIMNKCPLPAKEALDARLIDGIMYPYNVDRMVKRFIMMPTLQLEAAASDQALPTDTDHAEGDASATCSRVSMTDYIK-AMRTREANVQEIPDGDKYVAVMNLTGTIVR---HAD--AQEGSITSSTLCERLRKVSEDKSIGAVVLRIDSGGGSAVASDSIAAAVQRVREAGKPVVCSMGNVAASGGYMIASACDTIVAQPTTITGSIGVVSLKLSIERLLNDWGIEVDNIELSENVLASSPFQELTPKQRSLMDKRVGDIYEDFVSRVAEGRKLPVEQVLKHAKGRIWTGQQAKERGLVDELGGLNSAIAIAKKTAGLP-EEALAVSTFP 1507
D VDALE +KD RVK ++ R S FA +QELRDAV FR+S +A VA DTFGE A G Y++ASAF+++ +Q++G +GL GL + F + FDK GI+P++ R EYK+ T T K Y+ P+REA L + + IA+ R L E V+A++++ PL A EAL A+L+DG+ Y V VK+ AA D L + ++ Y+K A R E+ G VA++ G + R H + + +GS+ + T+ LRK ED ++ A+V R+DS GGS VASD+I VQR +EAGKPV+ SMG +AASGGY+++ IVAQP T+TGSIGV K L G+ D I L + +S TP+Q++ ++ + IY DF +R A GRKLP+E++ A+GR+WTG+ AK GLVD LGGL +A+ +AK+ A L ++ + V FP
Sbjct: 73 DVVDALEKGAKDGRVKALVVRISGSPGS---FAAVQELRDAVKAFRKSGKKA--------------VAYADTFGEFSGANGAYYLASAFDEVYVQQSGDIGLVGLSQETPFAREAFDKLGIQPQISKRYEYKNAPNTYTEKGYTAPHREATEKYLGSLQGQMLRGIAEDRKLT-VEGVQALVDRAPLMASEALQAKLVDGLAYRDEVIEKVKK----------AAGHDAEL-----------------LYLSKYLKRAGRPHES-------GRDKVALVYGVGGVERGKSHGNPLSGDGSMGADTVAGALRKAIEDDAVKAIVFRVDSPGGSYVASDTIRREVQRAKEAGKPVIVSMGGLAASGGYLVSMDATRIVAQPGTLTGSIGVFGGKFVTAGLWEKLGVNWDTIALGKMATLTSSDAPYTPEQQARIEAMMDRIYLDFTTRAAAGRKLPLEKLQAIARGRVWTGEDAKALGLVDALGGLPTALKLAKEEAKLAADKEVRVELFP 529
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Match: UPI001AE6D90B (signal peptide peptidase SppA n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE6D90B) HSP 1 Score: 292 bits (747), Expect = 8.470e-86 Identity = 193/528 (36.55%), Postives = 276/528 (52.27%), Query Frame = 2
Query: 2 DAVDALEMASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKKGEGSGGEGRKFTVAVTDTFGEGGPAMGEYFIASAFEKILMQKTGFVGLTGLGSQQLFLKGFFDKYGIKPEVFAREEYKSFAETLTNKTYSEPNREAVTFLLNGMLDHIADAIAQSRGLEGSEAVRAIMNKCPLPAKEALDARLIDGIMYPYNVDRMVKRFIMMPTLQLEAAASDQALPTDTDHAEGDASATCSRVSMTDYIKAMRTREANVQEIPDGDKYVAVMNLTGTIVRHADAQEG----SITSSTLCERLRKVSEDKSIGAVVLRIDSGGGSAVASDSIAAAVQRVREAGKPVVCSMGNVAASGGYMIASACDTIVAQPTTITGSIGVVSLKLSIERLLNDWGIEVDNIELSENVLASSPFQELTPKQRSLMDKRVGDIYEDFVSRVAEGRKLPVEQVLKHAKGRIWTGQQAKERGLVDELGGLNSAIAIAKKTAGLPEEA-LAVSTFP-VKPTLKQIFKRFRETGDVTE 1567
D +D LE +D RVKGVL ++ D++ FA QELR A+ +FR S +F +A +++GEGG Y +ASAF+++ MQ G + TGL +Q F + DK I+P++ REEYKS A+T T ++ +RE + LL + + + D +A+SR L + AVR M+K PL KEALDA+LID + Y + D A A V DY+ + VA+++ GTI + G + S T+ + + +ED + A++ RIDSGGG AS++I A+ + RE+GKPVV SMG+ AASGGY IA A D IVA P T+TGSIGVV+ K+S L G+ IE N SP + +P ++ + Y F++RVAE R+L EQ AKGR+W+G QA+E GLVDELGG +A+ +AK+ AGL EA + ++ FP K T ++I GD+ E
Sbjct: 68 DVLDTLERGRRDPRVKGVL---AHLGGDSIGFAQAQELRTAMDRFRASG--------------RFAIAFAESYGEGGAGNRSYLLASAFDEVWMQPLGMLSFTGLAAQIPFARAALDKLDIQPQILQREEYKSLADTFTRTDFTPAHREMMESLLGDLTNQLVDGVAKSRRLPPA-AVRTAMDKAPLLDKEALDAKLIDRLGYADEAE---------------------------DAARQRAGGRVELVEAQDYLDVAGPAHRS-------GPTVALIHAVGTITSGKSEKPGLGEVTAGSETIAKAIEDAAEDPDVKAILFRIDSGGGGVSASETIRRALTKARESGKPVVASMGDTAASGGYWIALAADKIVASPATLTGSIGVVAGKMSAAALSERLGVHWGTIETGPNAGMWSPLRPFSPSAEERLNAIIDSSYNTFLTRVAEARRLTPEQARAAAKGRVWSGAQARELGLVDELGGQETALVLAKQAAGLDAEAPVTLTPFPRPKSTTEEILDLVSGKGDLVE 543
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Match: A0A3A5ALU4_9DELT (Protease 4 n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3A5ALU4_9DELT) HSP 1 Score: 291 bits (744), Expect = 1.930e-85 Identity = 195/524 (37.21%), Postives = 287/524 (54.77%), Query Frame = 2
Query: 2 DAVDALEMASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKKGEGSGGEGRKFTVAVTDTFGEGGPAMGEYFIASAFEKILMQKTGFVGLTGLGSQQLFLKGFFDKYGIKPEVFAREEYKSFAETLTNKTYSEPNREAVTFLLNGMLDHIADAIAQSRGLEGSEAVRAIMNKCPLPAKEALDARLIDGIMYPYNVDRMVKRFIMMPTLQLEAAASDQALPTDTDHAEGDASATCSRVSMTDYIKAMRTREANVQEIPDGDKYVAVMNLTGTIV----RHADAQEGSITSSTLCERLRKVSEDKSIGAVVLRIDSGGGSAVASDSIAAAVQRVREAGKPVVCSMGNVAASGGYMIASACDTIVAQPTTITGSIGVVSLKLSIERLLNDWGIEVDNIELSENVLASSPFQELTPKQRSLMDKRVGDIYEDFVSRVAEGRKLPVEQVLKHAKGRIWTGQQAKERGLVDELGGLNSAIAIAKKTAGLPE-EALAVSTFPVKPTLKQIFKRFRETGD 1558
D V+AL +AS+DDR+ ++ + + A QE+RDAV +FR G+G+K VA +++FGE GP Y++A+AF+KI +Q +G VGLTG+G + F++ D+ GI+PE+ AR+EYKS A LT K Y+EP+REA +L+ +L I D +A+SRG+ G + +R + P AK+AL L+D + Y V + DA S + ++ Y+K R + G K +AV+ G I R + + S T+ R ++DKS+ A+V RIDS GGS VASD+I + AGKPV+ SM +VA SGGY +A ACD I+A P TITGSIGVVS K+ N GI + ++N S + +QR L++ + +IY DFV + ++GRK+ V+++ AKGRIWTG+ A E+GLVDELGGL+ AI A+ AG+ E E + + FP + + + KR + D
Sbjct: 68 DVVEALRLASEDDRIALLVAKVGD---SGMKMAKTQEIRDAVIRFR-------------GKGKK-AVAFSESFGEFGPGNTSYYLATAFDKIHLQPSGSVGLTGMGMKTPFVRELLDRIGIEPEMGARKEYKSAAYLLTQKEYTEPHREADKAVLDSLLSQIVDGVARSRGI-GRDKLRDLFEVGPFAAKQALQEGLVDELAYRDEVRTKARE---------------------------DAGKGASFLGLSGYLKKRRGASS-------GRKKIAVIYGIGRIAQGKSRSSPLGRFVMGSETVSSSFRAAAKDKSVKAIVFRIDSPGGSYVASDTIWRETICAKNAGKPVIASMSDVAGSGGYFVAMACDRIIAHPGTITGSIGVVSGKMVTSGFWNRIGIRWGELYTNKNADFWSSTNSYSAEQRRLLESWLDEIYNDFVRKASDGRKMDVKKMEMAAKGRIWTGRDAMEKGLVDELGGLHEAIRAARAAAGIAEGEKVGLKIFPPR---RSLLKRITRSED 536
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Match: A0A2U1W1N4_9PROT (Protease 4 n=1 Tax=Azospirillum sp. TSO22-1 TaxID=716789 RepID=A0A2U1W1N4_9PROT) HSP 1 Score: 290 bits (743), Expect = 2.630e-85 Identity = 198/516 (38.37%), Postives = 280/516 (54.26%), Query Frame = 2
Query: 2 DAVDALEMASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKKGEGSGGEGRKFTVAVTDTFGEGGPAMGEYFIASAFEKILMQKTGFVGLTGLGSQQLFLKGFFDKYGIKPEVFAREEYKSFAETLTNKTYSEPNREAVTFLLNGMLDHIADAIAQSRGLEGSEAVRAIMNKCPLPAKEALDARLIDGIMYPYNVDRMVKRFIMMPTLQLEAAASDQALPTDTDHAEGDASATCSRVSMTDYIKAMRTREANVQEIPDGDKYVAVMNLTGTIVRHADAQEG----SITSSTLCERLRKVSEDKSIGAVVLRIDSGGGSAVASDSIAAAVQRVREAGKPVVCSMGNVAASGGYMIASACDTIVAQPTTITGSIGVVSLKLSIERLLNDWGIEVDNIELSENVLASSPFQELTPKQRSLMDKRVGDIYEDFVSRVAEGRKLPVEQVLKHAKGRIWTGQQAKERGLVDELGGLNSAIAIAKKTAGL-PEEALAVSTFPV-KPTLKQI 1531
D +DALE A D RVKG+L R FA QE+R+AV +FR + +F +A + FGEGG Y++A+ F+++ +Q G VG+TGL +Q F +G D+ GI+P+V REEYKSFA+T T + + NRE LL+ + + D IA++R L+ +E VRA++++ PL +EAL ARLID I Y + +R A + V +TDY+ A DG VA+++ GTI R G S S T+ E K ED + A++ R+DSGGGS AS+SI AV R RE GKPVV SMG+ AASGGY I+ D IVA P TITGSIGVV+ K+S+E L G+ + ++N SPF+ +++ + + Y F+++VAE R+LP ++V AKGR+WTGQQA GLVDELG +A+ ++ GL P+ +A+ FP K TL++I
Sbjct: 69 DVLDALERARTDARVKGLLVRIGGHE---PGFAEAQEIRNAVERFRATG--------------RFALAFAEGFGEGGAGNRSYYLATGFDEVWVQPLGDVGITGLAAQIPFARGALDQLGIQPQVQQREEYKSFADTFTQRDLTPANREMTQALLSDLSKQLVDGIAKARRLDVNE-VRALIDRAPLMDQEALQARLIDRIGYRDEAEAEARR---------RAGGGET-------------------VELTDYLDAAGPPHR------DGP-VVALIHAVGTISRGESEGRGISEVSAGSDTIVEAFDKAVEDDDVKAILFRVDSGGGSVTASESIRRAVVRARERGKPVVVSMGDAAASGGYWISMNADRIVAMPGTITGSIGVVAGKMSLEGLSEKLGVHWGVVADAKNAGMWSPFRAFNESEQARLTAMIDRTYASFLAKVAEARRLPADKVRAAAKGRVWTGQQALGLGLVDELGDTETALMRVREAIGLKPDAPVALEPFPPPKSTLEEI 531
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Match: A0A545TXP2_9PROT (Protease 4 n=1 Tax=Denitrobaculum tricleocarpae TaxID=2591009 RepID=A0A545TXP2_9PROT) HSP 1 Score: 291 bits (744), Expect = 3.650e-85 Identity = 188/518 (36.29%), Postives = 287/518 (55.41%), Query Frame = 2
Query: 2 DAVDALEMASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKKGEGSGGEGRKFTVAVTDTFGEGGPAMGEYFIASAFEKILMQKTGFVGLTGLGSQQLFLKGFFDKYGIKPEVFAREEYKSFAETLTNKTYSEPNREAVTFLLNGMLDHIADAIAQSRGLEGSEAVRAIMNKCPLPAKEALDARLIDGIMYPYNVDRMVKRFIMMPTLQLEAAASDQALPTDTDHAEGDASATCSRVSMTDYIKAMRTREANVQEIPDGDKYVAVMNLTGTIV--RHADAQEGS--ITSSTLCERLRKVSEDKSIGAVVLRIDSGGGSAVASDSIAAAVQRVREAGKPVVCSMGNVAASGGYMIASACDTIVAQPTTITGSIGVVSLKLSIERLLNDWGIEVDNIELSENVLASSPFQELTPKQRSLMDKRVGDIYEDFVSRVAEGRKLPVEQVLKHAKGRIWTGQQAKERGLVDELGGLNSAIAIAKKTAGLPE-EALAVSTFPVKPTLKQIFKR 1540
DAVDAL AS D RV GV+ R + + +QELR+A+ FR + KF++A ++FGEGG Y++ASAFE+I +Q +G + +TG+ + +++G DK+G+KP REEYK E LT + S+P +E + L++ L+ I + +++SRGL G + + ++++ PL A EA DA L+ + Y V LE A D+ S V + DY + +E DG +A++ G I + D+ GS + S T+ LR+ +D + A+V R+DS GGS VASD+I V R REAGKPV+ SMG +AASGGY +++A + IVA P TITGSIGVV+ K+ ++ L ++ I D ++ N S ++ TP+Q ++ + +Y DF +VAEGR LP+ VL AKG++WTG+ AKE GLVDELGG +A+ +A+ AGL E ++ + P P+ + + ++
Sbjct: 83 DAVDALSRASSDPRVVGVVARVGRGP---LGISQVQELREAIAGFRATG--------------KFSIAFAESFGEGGDGTLHYYLASAFEEIWLQPSGDLDITGIQLESPYIRGLLDKHGVKPSFGQREEYKGAVEFLTGEEMSQPVKENLQQLVDSWLEQIVEGVSESRGL-GPQLTQELIDRAPLSATEAKDAGLVSELGYWDGV--------------LEFAFPDE---------------DSSPVDIRDYYAGLE------EEFSDGP-VIALVQGAGAIALAENDDSFGGSSVMGSDTISAALRRAVDDPDVAAIVFRVDSPGGSYVASDTIWREVVRAREAGKPVIVSMGGLAASGGYFVSAAAERIVANPATITGSIGVVTGKVVLDDLWREYDIGWDGVQAGRNAGIWSANRDFTPQQWQMLQTSLDRVYTDFTQKVAEGRGLPLPDVLSSAKGQVWTGRDAKELGLVDELGGFATALKLARSAAGLTEGQSHQLRVLPEAPSFEDMIRK 546
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Match: A0A3S0I3V0_9PROT (Protease 4 n=1 Tax=Azospirillum griseum TaxID=2496639 RepID=A0A3S0I3V0_9PROT) HSP 1 Score: 290 bits (742), Expect = 4.070e-85 Identity = 186/512 (36.33%), Postives = 275/512 (53.71%), Query Frame = 2
Query: 2 DAVDALEMASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKKGEGSGGEGRKFTVAVTDTFGEGGPAMGEYFIASAFEKILMQKTGFVGLTGLGSQQLFLKGFFDKYGIKPEVFAREEYKSFAETLTNKTYSEPNREAVTFLLNGMLDHIADAIAQSRGLEGSEAVRAIMNKCPLPAKEALDARLIDGIMYPYNVDRMVKRFIMMPTLQLEAAASDQALPTDTDHAEGDASATCSRVSMTDYIKAMRTREANVQEIPDGDKYVAVMNLTGTIVRHADAQ----EGSITSSTLCERLRKVSEDKSIGAVVLRIDSGGGSAVASDSIAAAVQRVREAGKPVVCSMGNVAASGGYMIASACDTIVAQPTTITGSIGVVSLKLSIERLLNDWGIEVDNIELSENVLASSPFQELTPKQRSLMDKRVGDIYEDFVSRVAEGRKLPVEQVLKHAKGRIWTGQQAKERGLVDELGGLNSAIAIAKKTAGLPEEA-LAVSTFPVKPTL 1522
DA+DALE KD RVKGVL R D + FA QELR AV +FR S +F +A D++G+GG + +AS F+++ MQ G VGLTGL ++ F +G D G++P++ REEYKSF++T T T + NRE + L+ + + + D +A+ R L + +VRA +++ PL +EALD +LID I Y +D+A A DA V + DY+ D +A++++ GTI + E + + T+ + ++D + A+++RIDSGGG+ AS+SI A+ + R+ GKPV+ SMG+ AASGGY IA A D IVA P T+TGSIGVV+ K+S+ L + G+ D + + N SP +P + + + Y F+ RVAE R+L EQ AKGR+WTG QA+E GL+DELGG A+ +A+ AGL +A + ++ +P TL
Sbjct: 68 DALDALERGRKDARVKGVLARLG---GDQIGFAQTQELRAAVERFRASG--------------RFAIAYADSYGDGGAGNRAFLLASGFDEVWMQPLGVVGLTGLSAELPFARGLLDTLGVQPQLQHREEYKSFSDTFTQSTITPANREMMQGLIGDLTNQLVDGVAKGRRLPPA-SVRAAIDRAPLLEREALDLKLIDRIGY-----------------------ADEARDAALQRAGADAEL----VELPDYLAVAGGPH-------DNGPTIALVHIVGTITGGKSERPTFGEINAGADTVVRAIEDAADDADVRAILVRIDSGGGAVSASESIRRALAKARQRGKPVIASMGDSAASGGYWIALAADRIVASPATLTGSIGVVAGKMSLGGLSDKLGVRWDRVSAARNAGMWSPMHPFSPAEEERLTAIIDATYASFLERVAEARRLTPEQARAAAKGRVWTGAQARELGLIDELGGQEEALTLARSAAGLATDAEVTLAPYPPPKTL 527 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8842.16368.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8842.16368.1 >prot_H-elongata_contig8842.16368.1 ID=prot_H-elongata_contig8842.16368.1|Name=mRNA_H-elongata_contig8842.16368.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=581bp MASKDDRVKGVLGRFSYRSWDNVPFACLQELRDAVGKFRESAVEAKKGEGback to top mRNA from alignment at H-elongata_contig8842:1089..8524- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8842.16368.1 ID=mRNA_H-elongata_contig8842.16368.1|Name=mRNA_H-elongata_contig8842.16368.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=7436bp|location=Sequence derived from alignment at H-elongata_contig8842:1089..8524- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8842:1089..8524- >mRNA_H-elongata_contig8842.16368.1 ID=mRNA_H-elongata_contig8842.16368.1|Name=mRNA_H-elongata_contig8842.16368.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3486bp|location=Sequence derived from alignment at H-elongata_contig8842:1089..8524- (Himanthalia elongata Himel1 dioecious)back to top |