mRNA_H-elongata_contig88333.16361.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 241 bits (615), Expect = 3.120e-70 Identity = 157/464 (33.84%), Postives = 235/464 (50.65%), Query Frame = 1
Query: 1 AIAREMDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRD--SRKQVGLLKKAMYGLVHAGL-----LCAMKRDEEQA------------------------VRDLCSC-----------------FRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKT-SILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGATHWRAAQKALQYLWRTPDLGITYGGE-VGGARSYQY--YGTCPDMRRSVSGGAVMVSGGAISWFSRVKKVTAAASSKSEYVALAEMVNELRFLPHVKKFMTPPIDVAIKMHEDNEGAIKMAKNCFSSRRMRHVYIKHHIVRDAMEGG 1236
AI E+ G W++ E+P G V+G+ VFK K D G I KYK LVAQGF Q+ G+ Y ++ +P +SIR++ ++ A WE Q+DV AYL D+EEEI+++ P + ++V L K +YGL AG LCA D A V DL F + DLGE + LG I RDR T+ Q YI T+ RF + S+ ++ +L+ SP T ++MR I YRE +G+LM AA TRPD+S+A L++F NPG HW AA++ ++YL T + +TYGG+ G + +G+ D RRS+SG ++ GGA+SW S+ + + A +S+++EYVA+ E+ + + P D ++ DN+ AI +AK+ R +H+ I+ H +RD +E G
Sbjct: 48 AIEDELGRMKKMGTWELAEKPPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGDNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERG 510
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 243 bits (619), Expect = 4.760e-70 Identity = 148/465 (31.83%), Postives = 236/465 (50.75%), Query Frame = 1
Query: 1 AIAREMDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQ--VGLLKKAMYGLVHAG------------------------------------LLCAMKRDEEQAV----------RDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKT-SILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGATHWRAAQKALQYLWRTPDLGITYGGEVGGARSYQY--YGTCPDMRRSVSGGAVMVSGGAISWFSRVKKVTAAASSKSEYVALAEMVNELRFLPHVKKFMTPP--IDVAIKMHEDNEGAIKMAKNCFSSRRMRHVYIKHHIVRDAMEGG 1236
AI +EM G + +VE PK ++G++ VF+ K + + +IE YK LVAQGF QV GI + E+ +P ASI ++ ++ A WE Q+DV AYL D+EEEIY++ P + K+ V LK+ +YGL +G LL A+ D+ R++ + F++ DLGE + LG + RDR+ TL QH YI + RF + S+ + G LS P T E+M+ IPYRE++G+LM AA TRPDI++A L++F NPG HW AA++ +YL T + +T+G G + +G+ + R S+SG ++ G A+SW ++ + V A +S+++EY+A+ E +L + + P + +++H DN+ I +AK+ R +H+ I+ H + +E G
Sbjct: 130 AIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRERWLTFGETTDGVEGFSDADWGSA-EHRHSISGYVFLLDGSAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLHSLLADVLHPDILRYPVRLHSDNKSVIALAKDDAYHARTKHIDIRFHFIHKTVENG 593
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 250 bits (639), Expect = 9.900e-70 Identity = 153/465 (32.90%), Postives = 239/465 (51.40%), Query Frame = 1
Query: 1 AIAREMDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQ--VGLLKKAMYGLVHAG------------------------------------LLCAMKRDEEQAV----------RDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKT-SILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGATHWRAAQKALQYLWRTPDLGITYGGEVGGARSYQY--YGTCPDMRRSVSGGAVMVSGGAISWFSRVKKVTAAASSKSEYVALAEMVNELRFLPHVKKFMTPP--IDVAIKMHEDNEGAIKMAKNCFSSRRMRHVYIKHHIVRDAMEGG 1236
AIA+EM G + +VE PK ++G++ VF+ K + +G+IE YK LVAQGF QV GI + E+ +P ASIR++ ++ A WE Q+DV AYL D+EEEIY+ P + K+ V LK+ +YGL +G LL A+ D+ R++ + F + DLGE + LG + RDR+ TL Q YI + RF + S+ + G LS P T E+M+ IPYRE +G+LM AA TRPDI++A L++F NPG HW AA++ +YL T + +T+G G + +G+ + R S+SG ++ GGA+SW ++ + V A +S+++EY+A+ E +L + + P + +++H DN+ AI +AK+ R +H+ I+ H +R+ +E G
Sbjct: 940 AIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDGVEGFSDADWGSA-EHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETVENG 1403
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL) HSP 1 Score: 234 bits (597), Expect = 5.130e-68 Identity = 152/457 (33.26%), Postives = 231/457 (50.55%), Query Frame = 1
Query: 1 AIAREMDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQVGLLKKAMYGLVHAG-----------------------------------LLCAMKRDE----------EQAVRDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKT-SILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGATHWRAAQKALQYLWRTPDLGITYGGEVGGARSYQY----YGTCPDMRRSVSGGAVMVSGGAISWFSRVKKVTAAASSKSEYVALAEMVNELRFLPHVKKFMTPPIDVAIKMHEDNEGAIKMAKNCFSSRRMRHVYIKHHIVRD 1221
A+ E D + G W V+R V+ T+ VF +K ++ G I ++K LVA GF Q+ G+ + E+ + + SIR+ S+ A G+ QLDVD A+L AD++E++YIE PE + +V L KA+YGL AG +C D ++ + + + FRIK+LG + LG I DR L +Q Y++T+ ERF + LSK+D P+ D EM + PYR ++G L A TRPDI+FA L++F +NPG HW AA + L+YL T D GI+YGG+ + +GT D RRSVSG +M++GG I + ++ + A +SS++EY+AL+ E+ ++ + + I I++ EDN+GAI +A N R +H+ I+HH VRD
Sbjct: 12 AVKAEFDAHSRNGTWTKVKRQTWMKVIKTKWVFAKKFNEHGDILRWKARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDTTYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQSTVALSSSEAEYLALSLCGQEVMWVRTMLHDLGINIKKPIQVWEDNQGAIALAHNAGYHARTKHIDIRHHYVRD 468
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY) HSP 1 Score: 244 bits (622), Expect = 1.910e-67 Identity = 158/463 (34.13%), Postives = 233/463 (50.32%), Query Frame = 1
Query: 1 AIAREMDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKG--IHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQ--VGLLKKAMYGLVHAG------LLCAM----------------KRDEEQAVR----------------------DLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKTSILP-SVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGATHWRAAQKALQYLWRTPDLGITYGGEVGGARSYQY--YGTCPDMRRSVSGGAVMVSGGAISWFSRVKKVTAAASSKSEYVALAEMVNELRFLPHVKKFMTPP--IDVAIKMHEDNEGAIKMAKNCFSSRRMRHVYIKHHIVRDAME 1230
AI E D V+ +VE P ++G+++VF+ K D +G + +K LVAQGF QV G H +E+ +P SIR + S+ A WE RQ+DV AYL +EE +Y+ LP + + V LKK +YGL AG L AM KR+ E A+ D+ F + DLG+ + LG + RDR T+ Q YI T+ RF + + + L + G L SP T E+MR +PYRE VG+LM AA TRPDI+FA L++F NPG HW A ++ L+YL + +L + YG G R Y +G+ + R S+SG + GGAISW S+ + V A +S+++EY+AL E +L +V + P +++H DN AI +AK+ R +H+ I+ H +R+A++
Sbjct: 1046 AIDAEYDNLRRHDVFDLVEPPPDANIVGSKLVFRVKHDAEGAVSGFKARLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKREGESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKRVLRYLKGSRELWLVYGTNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDILHPELATFPVRLHSDNRSAIALAKDNAFHSRTKHIDIRFHFIREAVD 1508
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A060SPD4_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SPD4_PYCCI) HSP 1 Score: 243 bits (621), Expect = 2.170e-67 Identity = 153/462 (33.12%), Postives = 240/462 (51.95%), Query Frame = 1
Query: 1 AIAREMDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELP--EAYRDSRKQVGLLKKAMYGLVHAG-----LLCAM-----------------KRDEEQAVR-----DLC------------------SCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVT--KTSILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGATHWRAAQKALQYLWRTPDLGITYGGEVGGARSY-QYYGTCPDMRRSVSGGAVMVSGGAISWFSRVKKVTAAASSKSEYVALAEMVNELRFLPHVKKFMTPPIDVAIKMHEDNEGAIKMAKNCFSSRRMRHVYIKHHIVRDAMEGG 1236
AI E+D G W++V RP V+ ++ V + K + G+I+KYK LVA+GF QV G+ Y ++ +P +SIR++ +I A GW A D + AYL + ++E++Y+E P A+ D + V L+KA+YGL G LCA K + E + D C + ++I DLG S+ LG I+ D GTL QH YI+ + RF T K +P + + LSK+ P++ A+V MR++PYRE +GALM AA TRPDI+FA LA+F NPG HW A ++ +YL T L + YGG+ Y G + RR+++G +V GGA+SW S+ +++ ++++SEYVA E +L + + P+ A ++ DN+ AI + K+ R +H+ +++H +R ++ G
Sbjct: 816 AIKAELDSLVANGTWRIVPRPSSGNVVDSKWVLRVKKNAAGEIDKYKARLVARGFTQVYGVDYYDTFAPVAKLSSIRLLLAIAARNGWAADSFDFNSAYLNSKLDEDVYLEQPPDHAFADRKAFVLKLEKALYGLKQGGRKWYETLCAALGRLGFTRVEADWGVFYKHEGEHLIVLAVHVDDCLLTGSSRRLLDDTKSKIGTVYKITDLGPVSWLLGIKISCDLEAGTLSLSQHAYIEALLARFNFTDLKPVSMP-MDPHQLLSKTQCPESPAEVARMRRVPYREAIGALMYAALGTRPDIAFAVSTLAQFAQNPGQPHWDAVKRIFRYLLGTRTLSLIYGGQQRELEGYVNADGATQEHRRAITGYVFLVDGGAVSWASKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFGPLSNATMLYSDNQAAIALTKDGSYHARTKHIDVRYHFIRYYIDAG 1276
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM) HSP 1 Score: 243 bits (621), Expect = 2.310e-67 Identity = 151/458 (32.97%), Postives = 241/458 (52.62%), Query Frame = 1
Query: 1 AIAREMDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRDSRKQVGLLKKAMYGL----------VHA---------------------------------GLLCAMKRDEE--QAVRDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGV--TKTSILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGATHWRAAQKALQYLWRTPDLGITYGGEVGGARSYQY----YGTCPDMRRSVSGGAVMVSGGAISWFSRVKKVTAAASSKSEYVALAEMVNELRFLPHVKKFMTPPIDVAIKMHEDNEGAIKMAKNCFSSRRMRHVYIKHHIVRD 1221
A+ E+ G W +V R G +G R VF +K ++ G++ +YK LVA+GF+Q G+ + E+ SP SIR+V S++ A + QLD D A+L +D++E++++E+P ++ + L KA+YGL +HA ++ A K ++E + L S F++K+LGE + LG I DR TLM Q +YI + RF K + P +G K L+K SP T+A+ E+MR PYR ++G L+ T TRPD+++ QL++F +NPG HW+AA + L+YL T + GI Y G G Y +G+ D RRSVSG +MV G + + S+ ++ A +S+++EY+AL+ E+ + + K + A ++ EDN+GAI +A N + R +HV I+HH +R+
Sbjct: 855 AMNSELKAHADNGSWTLVRRTSGARPIGCRWVFAKKRNEHGRVVRYKARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKAYVTEQLDADTAFLNSDLKEQVFMEVPYGILNAEHMMCKLDKAIYGLKQAASAWHQTIHAVFMKIGFHSCGADQCVYVKGTKDNYVYVCLYVDDMIIAAKTNKEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFNQQDAKAVVNPCESGMK-LTKMQSPTTNAEREDMRNKPYRSLIGCLLYITTCTRPDVAYIVTQLSRFLENPGQQHWKAAIRVLRYLKTTKEFGIVYNGNNGKVAMEAYTDADWGSNLDDRRSVSGIMIMVGGAPVIFKSKYQRTVALSSAEAEYMALSLCTQEVLWTRTMLKDLGHEQVGATQVWEDNQGAIALASNAGYNARTKHVDIRHHFIRE 1311
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY) HSP 1 Score: 241 bits (616), Expect = 1.170e-66 Identity = 158/470 (33.62%), Postives = 243/470 (51.70%), Query Frame = 1
Query: 1 AIAREMDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELP--EAYRDSRKQVGLLKKAMYGLVHAG------------------------------------LLCAMKRDE------EQAV----RDLCSCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKTSILPS-VAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGATHWRAAQKALQYLWRTPDLGITYGGEVGGARSYQY--YGTCPDMRRSVSGGAVMVSGGAISWFSRVKKVTAAASSKSEYVALAEMVNE---LRFL------PHVKKFMTPPIDVAIKMHEDNEGAIKMAKNCFSSRRMRHVYIKHHIVRDAME 1230
AI +EM + +VE P+ V+G++ VF+ K + +GKIE YK LVAQGF Q+ GI + ++ +P ASIR++ ++ A W+ Q+DV AYL AD+EEEI+++ P +A R V LL+ A+YGL +G L+ A+ D+ AV ++ F + DLGE + LG + RDR TL Q YI + RF + L + + G LS P T + E+MR +PYRE +G+LM AA TRPDI+FA L++F NPG HW AA++ L+YL T + +TYG G + +G+ + R S+ G ++ GGA+SW ++ + V A +S+++EY+AL E +R+L P V KF A+++H DN AI +AK+ R +H+ I++H +R+A++
Sbjct: 978 AIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYGLTRNGVEGFSDADWGSS-EHRHSICGYVFLIDGGAVSWSAKKQPVVALSSTEAEYIALTHAAKEAIWVRYLLADILDPDVSKF-------ALRLHTDNRSAIALAKDNAYHARTKHIDIRYHFIREAVD 1439
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A1M2V8C6_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V8C6_TRAPU) HSP 1 Score: 239 bits (611), Expect = 5.440e-66 Identity = 152/464 (32.76%), Postives = 232/464 (50.00%), Query Frame = 1
Query: 1 AIAREMDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPE--AYRDSRKQVGLLKKAMYGLVHAG-----------LLCAMKRDEEQ-------------------------AVRDLCSCFR--------IKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGV--TKTSILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGATHWRAAQKALQYLWRTPDLGITYGGEVGGARSYQY--YGTCPDMRRSVSGGAVMVSGGAISWFSRVKKVTAAASSKSEYVALAEMVNELRFLPHVKKFMTPPIDV--AIKMHEDNEGAIKMAKNCFSSRRMRHVYIKHHIVRDAMEGG 1236
AI EMD + +V RP G V+G+R+VF RK D DG I++ K +VAQGF Q+ G+ Y E+ +P +S+R++ ++ A W QLDV AYL D++EEIY+ P A + V L+K++YGL AG M R E DL FR + D G+ ++ LG + RD + GT+ Q I T+ + K + P GG L K+ P T + + EM IPYRE VG M A TRPDI++A H+LA++ NPG HW A ++ ++YL T +L +TYGG+ G Y +G+ D R SV G GGA+SW ++ + V A +S+++EY+ + E +L + + P A++++ DN+ A+ +A+N R +H+ I++H +R+A+E G
Sbjct: 1006 AITVEMDNLRAHSTYDLVVRPVGAHVIGSRLVFHRKRDADGSIKQCKVRVVAQGFGQIPGVDYNETFAPVAKSSSLRIMLALAARFSWPLIQLDVKSAYLNGDLDEEIYMRQPPGTAAQGEEHLVCRLRKSLYGLKQAGRAWYKKYRDAMTTLGMTRSEADHACFWQHGGDSLAMVGTIVDDMLVTGTPDLVEKFRAGIKAEFTVTDAGDVAWLLGIEVVRDLDAGTVRLAQRSAIDTLMRAMHLEGAKPASTPIAVGG-VLDKTQCPTTASAIAEMSGIPYREGVGMCMYIAVTTRPDIAYAVHRLAQYMSNPGRPHWEALKRLVRYLIGTRELWLTYGGDASGLAGYTDADWGSSDDTRHSVCGYVYTFDGGAVSWSAKKQNVVALSSTEAEYIGITHATKEAIWLRALLGDLIDPSFATHAVRLYSDNKSAMDLARNNAFHSRTKHIAIRYHFIREAVERG 1468
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 231 bits (589), Expect = 5.450e-66 Identity = 155/465 (33.33%), Postives = 235/465 (50.54%), Query Frame = 1
Query: 1 AIAREMDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFRQVKGIHYEESSSPTPAQASIRMVFSIIAALGWEARQLDVDMAYLEADVEEEIYIELPEAYRD---------SRKQVGLLKKAMYGLVHAGLL---------------------CAMKRDEEQAVRDLC------------------------SCFRIKDLGEASYYLGCHITRDRNTGTLMFDQHQYIQTMAERFGVTKTS-ILPSVAGGKALSKSDSPQTDADVEEMRQIPYREIVGALM*AATMTRPDISFAAHQLAKFNDNPGATHWRAAQKALQYLWRTPDLGITYGGEVGG---ARSYQYYGTCPDMRRSVSGGAVMVSGGAISWFSRVKKVTAAASSKSEYVALAEMVNELRFLPHVKKFMTPPIDVAIKMHEDNEGAIKMAKNCFSSRRMRHVYIKHHIVRD 1221
AIA E+ W++V +P + +G R VF K ++ G++ +YK LVA+G+ Q GI YEE+ SP S+R + + A G E Q DVD A+L ++EEEIY+ELPE R+ V +L +++YGL A + C R E + +C FRIKDLG A + +G I D TL Q Y +++ ++FG L + G L+K+D PQT+ D +M+ PYR +VG+LM A TRPDIS A +L++F +NPG HW A K ++YL +T D+GI Y G +G A S + D RRSVSG +M+ G + W S +K A +S+++EY+AL++ V E ++ + K + A ++EDN+GA+ +AKN R +H+ I++H +R+
Sbjct: 84 AIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRGEGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGVQLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGLLGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAEQVGATVIYEDNQGAMALAKNVGYQARTKHIDIRYHFIRE 548 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig88333.16361.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig88333.16361.1 >prot_H-elongata_contig88333.16361.1 ID=prot_H-elongata_contig88333.16361.1|Name=mRNA_H-elongata_contig88333.16361.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=238bp MDGQTGRGVWQVVERPKGKTVLGTRVVFKRKIDKDGKIEKYKCPLVAQGFback to top mRNA from alignment at H-elongata_contig88333:675..2168+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig88333.16361.1 ID=mRNA_H-elongata_contig88333.16361.1|Name=mRNA_H-elongata_contig88333.16361.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1494bp|location=Sequence derived from alignment at H-elongata_contig88333:675..2168+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig88333:675..2168+ >mRNA_H-elongata_contig88333.16361.1 ID=mRNA_H-elongata_contig88333.16361.1|Name=mRNA_H-elongata_contig88333.16361.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1428bp|location=Sequence derived from alignment at H-elongata_contig88333:675..2168+ (Himanthalia elongata Himel1 dioecious)back to top |