mRNA_H-elongata_contig8827.16355.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Match: D8LJY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJY0_ECTSI) HSP 1 Score: 501 bits (1289), Expect = 9.420e-146 Identity = 541/1651 (32.77%), Postives = 676/1651 (40.94%), Query Frame = 1
Query: 1 QEVSLAASRFDLNKCIRTYTHSEGKLKGFGAVAAVRTGPDRSEWGKEYRLFCGRGIKNIHVWSFKPEAEA----RGSSRVSRGKGHGGCGGLGKGEWACLYDTGTNGATVELVAFRNGGLEGISKSNDANVRVWDLSGEGRTTKPPFRDI--------IFGDYAYGGTTSLSLVKLDAPAVANRMEIALPDAGVSSPLAVRGXXXXXXXXXSARGKRHCRMLKDLAGTQDGRHVVLVCSDGSVLYHRHTQAVNTMRLEPLEGVGVDEDDARPTVALSLAGRAGLPVLMIAGGRERGG--AGSGDVESQKELVLKVLPRSDAQKLEDSQVTRLDSLGRPLLAWPEGRRLTPEDKMTE-----LGDYDDHSKNAECGREETVRRNPIQEEEGAEAMEGGSIGEATIA---------SPAATPDISKPDVVQSPPRKALTSPHAPATPSASSTPVTAAVAAAVTSTWQRLESKPDISPLPFEPPR-SMSPSPSSSGTGPSR-LF------TPGSSGRKHDVHTDSGKASAPGSSPSAQSTV----------GPSPGEVGSRGGRKKRGSGGCAGHGRSHAYSDSSLAQAGAACDTSTERRLLGTGADDFSLDVVGKNCGINGGGGNDDGGFNHQNNSVGTSTDRTVVNGSMEKSRIGDIDRRGGHGSSGGGSGCSETARDYGASVGRRMGKKRSREDQDKGAEDESGSEEGEVRDQRDKRQGGATTTVPLKRGRRGTGPGEEGGASSRGTVGKTRRTISHGVDDEGGGGGLGNGDQ----------VLLRDRRSRIAARALRSSGNVFDIGAIVKGMNTSWMNGA-EQPEEIRVVRVEEQDVVVGPRAVSAGLFNSLSEREEKRNREKFSIPLERVRAQYNARFELLPPYPPVPTAVAAVGDGKPFISEAGKERGADKNHSRVWGSLQ-----------------------VSRNPHHAMSSHTAAGVEKRAPFALASAHNPQEQGGRIAATA-----AVTAGNGVSVEKNGRDGNGEPRA------------------DATLAGAIADGIPAP--NPFPQSMFELTPGSGGSSHDNRVRGDARDATVPCKNSQSSRLAGWRGVGEYSDARLAPTASQFDRISGPSSILPC-------SERSFVVPTAAKSGFSTGMVASELQASVSSKGSNLVPTRTNAQSLGQATSSSSPSWGSFAGELRAVDPEAGVATTNKSFSAENASSVSGGGRKLAKLPSAGATE-ATAGNSAASHCEAETLDVDTNLEVEVDSEADIVDDCGDYNQAKVHAGESAKRFVGYDSSAISKDDRVPPSEISGTIGPSSSGNKRTTVGSVDVVDANATTNVAAVLEGRKGQNPQDIGKGKTVAFGSGAAEHPIVESSRNVVGAANVTTSGAHKLSKRGGKPAAAITVTAAVAPVGTSVFPPPQEFVIDMG--------LEGER----------------GNGGGIIDRLYGEHCLEREVVAKVFFNEQDALRRRFLAAVDLVEVDKAVECSGMLLLNGCRAAQTLKTRLKTRWREATVLPV------GGGG-----------------LSRCTAREAQQATLRWQDQIRVIIAEYKELLHDLLGRQKLEAGTLQMAQEMELSKGKAPPLTVRFAFPKIFDEVAQRHGIKL 4473
+E SL ASR DLN+ IRTY+HS+GKLKGFGA A VRTGP R EWGK YRLFCGRGIKNIHVWSF P+ + G G G+W CLYDT TNGATVELVAFRNGGLEGISKS DANVRVWDLS E + TKP FRDI +FGD+AYGG T LSLVKLDAP VANRMEI RH + D T D R + ++ ++ + + AVNTMRL+PLEG+G++E+DA+PTVALSLAG +GLPVL+IAGG+ GG A SG+ E KEL L LPR++ Q+ ED V R D+LGRP+L WPEGRRLTPED T+ D D+ S N G E + Q+ EG G G + PAAT + P ++P P TP P W+R D P+ SMS SPS G G + LF TPGS G + D G G++ GPSPG GSRGGR+KRG+ AA TS GG +D +G + V G E +G D+R DK A++E +E E ++ +LLRDRRSRIAAR LRSSG++FD+G+IVKG+ +SW++G EQ EE+RVVRVEE+D +V P V GL L R +R+RE I LE+ RA+Y A LLP A + V A+ + +P A ++ +G A T AV AG LAGA +P+P N Q + + +ER V AA++ + G + + QA S++ + A + S P + + P G A+ N + +A++A LP+AGA A G SA S D ++VE++ N+ A + + +++ +R P GS DVV A LE RK Q KR GK A P G VFPPP E VIDMG EGER GG IDRLYG+ CLERE A+ FF E D LRR+FLAAVDLVE+DKAVE G+ L +GCR QTLK RLKTRWRE TVL G G LSRCT++E QQATLRWQ+QIR +I ++KELL ++LGRQ+LEAG LQMAQ+ME+ KGKAPPL+VRFAFP +FDEVAQRH IK+
Sbjct: 133 EEASLNASRVDLNRLIRTYSHSDGKLKGFGAAAVVRTGPARREWGKRYRLFCGRGIKNIHVWSFVPDLASGXXXXXXXXXXXXXXXXGKSSRGGGQWTCLYDTHTNGATVELVAFRNGGLEGISKSTDANVRVWDLSSEEKQTKPSFRDISNSKDTRVVFGDFAYGGATVLSLVKLDAPPVANRMEIG----------------------------RHRPVASDTLST-DERIMHVLAPFSAIAFCLWSPAVNTMRLQPLEGIGMEEEDAKPTVALSLAGASGLPVLIIAGGKGSGGDAAVSGE-ERDKELELMALPRTEKQQREDLHVKRTDTLGRPMLPWPEGRRLTPEDNETDGEDSAAADSDNESGN---GNPEVGGXSSKQQGEGGGVSVGEEAGGTGVVPASPMNQQRQPAATSAAXXXXTILPP-----STPVPPVTPQG---PTWQGAGGDNALGWRRTGDSADAQQAGRPTPQTSMSVSPSPIGAGVQQHLFSSPAGSTPGSGGGRKRTRVDGGVDGKTGAADGXXXXXXQQGAPMIPGGPSPGSAGSRGGRRKRGAXXXXXXXXXXXXXXXXXXXT-AAGGTSAXXXXXXXXXXXXXXXXX-----XXXGGAKED---------LGERRRGSAVAGLAE---LGFEDQR------------------------------------DKAADEEGEQDEREAQNSTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLRDRRSRIAARTLRSSGSIFDMGSIVKGIGSSWLSGGGEQAEELRVVRVEEKDELVEPPVVPPGLVAFLETRRTRRDRETTPITLEQARARYRAGLRLLPHTLSAAAAXXXXXXARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPXXXXXXXXLVPASSXXRPSPPATEASAAVAARGSTSAVTPSLPGPAVVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPPLAGAAVGAVPSPQENAAQQGVLPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAER---VXXAAEASSAAGSLGA--QAGTSARAT--------------AAADSGPETTNRPSAMETSPP--GTAS-NFAPAADDA------------LPTAGAPPPAVVGGSARSTVVGVAGGADP-MDVEIE------------NRTIAAAAATVQ--------PVAEKNRAAP-------------------GSGDVVAK------AEALEERKEQATTRPPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPKKRAGK--AGTKEARPSPPKGHDVFPPPLECVIDMGRQETRRATTEGERPLGRQQRGYVPAEQPHDGGGSAIDRLYGDQCLEREAAARSFFAEHDNLRRQFLAAVDLVELDKAVESEGLELRSGCRTVQTLKMRLKTRWREGTVLGTILGDSCGSGXXXXXXXXXXXXXXXXXXLSRCTSKEVQQATLRWQEQIRAVITDHKELLREVLGRQRLEAGALQMAQQMEVPKGKAPPLSVRFAFPNMFDEVAQRHKIKM 1606
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Match: A0A6H5LF69_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LF69_9PHAE) HSP 1 Score: 474 bits (1219), Expect = 2.090e-134 Identity = 572/1900 (30.11%), Postives = 714/1900 (37.58%), Query Frame = 1
Query: 1 QEVSLAASRFDLNKCIRTYTHSEGKLKGFGAVAAVRTGPDRSEWGKEYRLFCGRGIKNIHVWSFKPEAEARGSSRVSRGKGHGGCGGLGKGEWACLYDTGTNGATVELVAFRNGGLEGISKSNDANVRVWDLSGEGRTTKPPFRDI--------IFGDYAYGGTTSLSLVKLDAPAVANRMEIA-LPDAGVSSPLAVRGXXXXXXXXXSARGKRHCRMLKDLAGTQDGRHVVLVCSDGSVLYHRHTQ-----------------------------------------------------------AVNTMRLEPLEGVGVDEDDARPTVALSLAGRAGLPVLMIAGGRERGG--AGSGDVESQKELVLKVLPRSDAQKLEDSQVTRLDSLGRPLLAWPEGRRLTPEDKMTELGDYDDHSKNAECGREETVRRNPIQEEEGAEAMEGG--SIGEATIASPAATPDISKPDVVQSPPRKAL----------------------TSPHAPATPSASSTPVTAAVAAAVTSTWQRLESKPDISPL---PFEPPRSMSPSPSSSGTGPSRLF------TPGSSGRKHDVHTDSGKASAPGSSP--------SAQSTVG-PSPGEVGSRGGRKKRGSGGC--------AGHG-----------------------------------------RSHAYSDSSLAQ-------AGAACDTSTERR--------LLGTGADDFSLD-------------VVGKNCGINGGGGNDDGGFNH---------------------------------------QNNSVGTSTDRTVVNGSMEKSRIGDIDRRGGHGSSGGGSGCSETAR-------------------------------------------------------------DYGASVGRRMGKKRSREDQDKGAEDESGSEEGEVRDQRDKRQGGATTTVPLKRGRRGTGPGEEGGASSRGTVGKTRRTISHGVDDEGGGGGLG---------------NGDQVLLRDRRSRIAARALRSSGNVFDIGAIVKGMNTSWMNGA-EQPEEIRVVRVEEQDVVVGPRAVSAGLFNSLSEREEKRNREKFSIPLERVRAQYNARFELLPPYPPVPTAVAAVGDGKPFISEAGKERGADKNHSRVWG-------------------------------SLQVSRNPHHAMSSH----------------------TAAGVEKRAPFALAS---AHNPQEQGGRIAATAAVTAGNGVSVEKNGRDGNGEPRADATLAGAIADGIPAP--NPFPQSMFELTPGSGGSSHDNRVRGDARDATVPCKNSQSSRLAGWRGVGEYSDARLAPTASQFDRISGPSSILPCSERSFVVPTAAKSGFSTGMVASELQASVSSKGSNLVPTRTNAQSLGQATSSSSPSWGSFAGELRAVDPEAGVATTNKSFSAENASSVSGGGRKLAKLPSAGATEATAGNSAASHCEAETLDVDTNLEVEVDSEADIVDDCGDYNQAKVHAGESAKRFVGYDSSAISKDDRVPPSEIS---GTIGPSSSGNKRTTVGSVDVVDANATTNVAAVLEGRKGQNPQDIGKGKTVAFGSGAAEHPIVESSRNVVGAANVTTSGAHKLSKRGGKPAAAITVTAAVAPVGTSVFPPPQEFVIDMG------------------------LEGERGNGGGIIDRLYGEHCLEREVVAKVFFNEQDALRRRFLAAVDLVEVDKAVECSGMLLLNGCRAAQTLKTRLKTRWREATVLPV-------------------GGGGLSRCTAREAQQATLRWQDQIRVIIAEYKELLHDLLGRQKLEAGTLQMAQEMELSKGKAPPLTVRFAFPKIFDEVAQRHGIKL 4473
+E SL ASR DLN+ IRTY+HS+GKLKGFGA A VRTGP+R EWGK YRLFCGRGIKNIHVWSF P+ + G G+G GC G G+W CLYDT TNGATVELVAFRNGGLEGISKS DANVRVWDLS E R TKPPFRDI +FGD+AYGG T LSLVKLDAP VANRMEI P G+ DGRHVVLVCSDG +LYHRHTQ AVNTMRL+PLEG+G E+DA+PTVALSLAG +GLPVL+IAGG+ GG A SG+ E KEL L LPR+ Q+ EDSQV R D+ GR +L WPEGRRLTPED T+ D S A+ G E + + + EGG S+GE ++ +VV + P ++P P TP P W+R + + + S+SPSP +G LF TPGS G + D G G++ A + G P+PG G RGGR+KRG+ AG G R + + LA+ G S E R ++ TG + GGG G + ++ D+ N + +G GG SG D +R GKKR+REDQ D+ G EEGE +D+R+ + TT GDQ LLRDRRSRI AR LRSSG++FD+G+IVKG+ +SW++G EQ EE+RVV VEE+D +V P V GL L R +R+RE I LE+ RA+Y LLP A A + S + GA+ SLQ P A SS T+A A+ + A + GG A +G GVS G P + LAGA +P+P N Q +F + GGS V G D P ++ +S + + +++ PS A++ A TN + +A++A L SAGA V AG + VG A D + I+ T+ P ++ N++ A +T K + +P+ P G V PPP E VIDMG E R GG IDRLYG+ CLERE A+ FF E D LRR+FLAAVDLVE+DKAVE G+ L NGCR QTLK RLKTRWRE TVL LSRCT++E QQATLRWQ+QIR +I ++KELL ++LGRQ+LEAG LQMAQ+ME+ KGKAPPL+VRFAFP +FDEVAQRH I +
Sbjct: 268 EEASLNASRVDLNRLIRTYSHSDGKLKGFGAAAVVRTGPNRREWGKRYRLFCGRGIKNIHVWSFVPDLASGGGGG---GRGKSGCRG---GQWTCLYDTHTNGATVELVAFRNGGLEGISKSTDANVRVWDLSSEERQTKPPFRDISNSKDIRAVFGDFAYGGATVLSLVKLDAPPVANRMEIGEKPREGLGG---------------------------------DGRHVVLVCSDGMLLYHRHTQPPTPSQATSAPCTFLLLSEPPLFVLVSSERDPNGLLFLLNVGGTLVCVWHSPPNDTPQQAVNTMRLQPLEGIGTREEDAKPTVALSLAGASGLPVLIIAGGKGSGGDAAVSGE-ERDKELELMALPRTKEQQREDSQVKRTDTFGRCMLPWPEGRRLTPEDNETDGED----SAAADSGNESGNGNPEVGGDSSRQQGEGGCVSVGE----------EVGGTEVVPASPMNQXXXXXXXXXXXXXXXXXXXXXXXSTPAPPVTPPG---PTWQGAGEDNALGWRRTGDSANAQQVGRPTSQTSMSLSPSPIGAGV-QQHLFSSPAGSTPGSGGGRKRTRVDGGSDGKTGAAXXXXXXXQQDAPTIHGVPTPGSAGLRGGRRKRGAXXXXXXXXXXXAGTGXXXXTAAXXXXXXXXXXXXXXXXXXXXXXXXXXXGKEGLSERKRGSAVAGLAELGFEVGIVGVLGSGSKESRKGSMAATTVVSTGXXXXXXXXXXXXXXXXXLGRAASGRSDVTAGGGEISGPVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVREHAQAAKQDKPRENRGEKSPSVG-----------GGDSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVDTSTVPAKRPGKKRAREDQ----RDKPGGEEGE-QDEREAQNPTPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGGDQ-LLRDRRSRITARTLRSSGSIFDMGSIVKGIGSSWLSGGGEQAEELRVVCVEERDALVEPPVVPPGLVAFLETRRTRRDRETTPITLEQARARYRTGLRLLPHMLSAAAASADADGARSNDSGSDSSDGANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVVPTPTSLQPELVP--ASSSXXXXXXXXXXXXXXXXXXXARGSTSAVTPSLPGLAVVAGDVAEETESAGGPRKDEPASVSG-GVSA---GXXXXXXPSSSPPLAGAAVGAVPSPQENAAQQGVFPM----GGS-----VDGGCADR-APAESLATSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATTIKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETATLPS---------AMETSPPAAATNLAPAADDA------------LTSAGAPPPA-----------------------------------------VVAGSTRSTVVGVAGGADPMDVEIESRTITTAAATMQPVANKNRKAPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARKKST---RKARTKEARPS---------PPKGPDVLPPPLECVIDMGRQETRRATTEDERPLGRQQRREIPCEQPRDGGGSAIDRLYGDQCLEREAAARSFFAEHDKLRRQFLAAVDLVELDKAVESEGLELRNGCRTVQTLKMRLKTRWREGTVLGTILSDSSGXXXXXXXXXXXXXXXXLSRCTSKEVQQATLRWQEQIRAVITDHKELLREVLGRQRLEAGALQMAQQMEVPKGKAPPLSVRFAFPNMFDEVAQRHKINM 2002
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Match: A0A835YLG3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLG3_9STRA) HSP 1 Score: 208 bits (530), Expect = 3.820e-51 Identity = 139/316 (43.99%), Postives = 177/316 (56.01%), Query Frame = 1
Query: 34 LNKCIRTYTHSEGKLKGFGAVAAVRTGPDRSEWGK-----EYRLFCGRGIKNIHVWSFKPEAEARGSSRVSRGKGHGGCGGLGKGEWACLYDTGTNGATVELVAFRNGGLEGISKSNDANVRVWDLSGEGRTTKPPFRDI-------------------------------IFGDYAYGGTTSLSLVKLDAPAVANRMEIALPDAGVSSPLAVRGXXXXXXXXXSARGKRHCRMLKDLAGTQDGRHVVLVCSDGSVLYHRHTQAVNTM---------RLEPLEGVGVDE--DDARPTVALSL--AGRAGLPVLMIA 834
L++ + ++HS+ KLKGFGA AA+ G D + G EYRL CGRGIKNIHVWSFKP + + W C++D TNG TVELV FR+G +G+SKS+ +R+WDLS +G +P + D+ +FGD+AYGGT SLSLV+LDA A ANR E+ALP G + XXXXXXXXX +RHCR++K LAGTQDGRHV+++CSDG VLYHRH RL+PL + VD +D TVALSL AG +P+LMIA
Sbjct: 78 LSEAVTLHSHSDAKLKGFGA-AALLGGADGASSGSGGGGAEYRLLCGRGIKNIHVWSFKPAPPGSSGAPL----------------WQCIHDVQTNGMTVELVGFRDGARQGLSKSDHMCIRLWDLSDDGGARRPGYTDVPNTQDAKDAKRRXXXXXXXXXXXXXXXXXXGVFGDFAYGGTYSLSLVRLDAAAWANRAELALPPQGSAX------XXXXXXXXXXXXARRHCRVIKRLAGTQDGRHVLVLCSDGQVLYHRHAANXXXXXXXXXDAHSRLQPLGALLVDGRGEDVPCTVALSLVDAGAGAVPMLMIA 370
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Match: W7TGH0_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGH0_9STRA) HSP 1 Score: 148 bits (374), Expect = 2.820e-32 Identity = 103/302 (34.11%), Postives = 154/302 (50.99%), Query Frame = 1
Query: 1 QEVSLAASRFDLNKCIRTYTHSEGKLKGFGAVAAVRTGPDRSEWG------------KEYRLFCGRGIKNIHVWSFKPEAEARGSSRVSRGKGHGGCGGLGKGEWACLYDTGTNGATVELVAFRNGGLEGISKSNDANVRVWDLSGEGRTTKPPFRDI--------IFGDYAYGGTTSLSLVKLDAPAVANRMEIALPDAGVSSPLAVRGXXXXXXXXXSARGKRHCRMLKDLAGTQ----DGRHVVLVCSDGSVLYHRHTQAVN-TMRLEPLEGVGVDED-DARPTVALSLAGRAGLPVLM 828
++V+L+ + +L I +T+ + KL+GFGAV R P R+ G EYRL CG GIKN+H+W F+ ++ S+ W C++D +NG ++EL+ R GGLE +SKS N+RVWDLS + + P+ DI + GDYA+GGT LSLV+LDA NRME+ LP S L+ A+ ++ C +KD+ GT G V++VCSDG V + +T A + T +L P+ + + D D ++AL + PV+M
Sbjct: 169 EDVNLSKAAAEL--LIECHTNLDAKLRGFGAV--TRVAPTRAASGLGAWEMESEAEPPEYRLICGLGIKNLHIWRFQQGSQVECSAPT----------------WECIFDLASNGMSIELLTVRAGGLEAVSKSCGQNLRVWDLSSLEKKDRAPYTDILNTQDIRAVCGDYAFGGTCQLSLVRLDACCELNRMELPLPTTVSSKALS----------GGKAKRRQLCS-VKDVVGTHGEGTQGGRVLVVCSDGGVHCYENTGATSATGKLVPVHSLTTEVDEDVSFSLALVGSPEMATPVVM 439
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Match: A0A7S1FY45_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY45_9STRA) HSP 1 Score: 143 bits (361), Expect = 5.350e-31 Identity = 84/239 (35.15%), Postives = 127/239 (53.14%), Query Frame = 1
Query: 46 IRTYTHSEGKLKGFGAVAAVRT-GPDRSEWGKEYRLFCGRGIKNIHVWSFKPEAEARGSSRVSRGKGHGGCGGLGKGEWACLYDTGTNGATVELVAFRNG--GLEGISKSNDANVRVWDLSGEG---------RTTKPPFRDI--------IFGDYAYGGTTSLSLVKLDAPAVANRMEIALPDAGVSSPLAVRGXXXXXXXXXSARGKRHCRMLKDLAGTQDGRHVVLVCSDGSVLYH 702
+ Y+HS+ K+KGFGA +R+ D S Y L CG+GIKNIH+W+F+P C G W C+YDT TNG+T+ +AFR GL+G+SKS+D +R+WDLS E +P +RD+ +FGDY++GGT+SL +++LD+ + N++E+ LP GV + +G R +R ++ G D HV+L SDG+ +Y+
Sbjct: 305 VHVYSHSDSKIKGFGACTRLRSYSIDDSADNAVYMLLCGKGIKNIHIWTFQPS-----------------CDGSSDPVWNCIYDTQTNGSTISYLAFRKAPDGLQGLSKSDDRCLRIWDLSSEELHGGLVKSEEKKRPSYRDVPHTEDCVGVFGDYSFGGTSSLKIIRLDSDKICNKIELPLP-TGVE--VEEKGMN---------RRRRPPSVIVGAVGVVDSSHVLLELSDGTFVYY 514
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Match: A0A7S2LAD5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LAD5_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.360e-25 Identity = 89/270 (32.96%), Postives = 123/270 (45.56%), Query Frame = 1
Query: 49 RTYTHSEGKLKGFGAVAAVRTGPDRSEWGKEYRLFCGRGIKNIHVWSFKPEAEARGSSRVSRGKGHGGCGGLGKGEWACLYDTGTNGATVELVAFR----------------NGGLEGISKSNDANVRVWDLS-------------GEGRTTKPPFRDI--------IFGDYAYGGT-TSLSLVKLDAPA--------VANRMEIALPDAGVSSPLAVRGXXXXXXXXXSARGKR---HCRMLKDLAGTQDGRHVVLVCSDGSVLYHRHT 711
R + H++ KLKGFGA +R D EYRLFCGRGIKNIH+W F A GS+ + +W CL T G +V L+ FR N LEG+SKS+ N+RVWDLS G KP + ++ +FG YA+GG S+ LV++ P + NR E+ LP +V S+RG+R R + ++AG DG HVVL SDG++ + ++T
Sbjct: 31 RVFRHADAKLKGFGACTRLRN-HDNDNTKAEYRLFCGRGIKNIHIWKFGL-ASTTGSADTADDA-----------QWECLLSIPTAGMSVSLLQFRHVQQQQLDANSSNDGNNWRLEGVSKSDGVNIRVWDLSAQEQXXXXXXXKQGSSAAAKPNYHEVRNTVDMHGVFGQYAFGGQHNSVGLVQVCRPTGDKKNNNYLFNRTELELPSNEEEDSSSVT--------RTSSRGRRGGGSLRTITNVAGISDGAHVVLQASDGAMYHLQNT 279
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Match: K0TLQ4_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TLQ4_THAOC) HSP 1 Score: 124 bits (312), Expect = 5.040e-25 Identity = 96/314 (30.57%), Postives = 143/314 (45.54%), Query Frame = 1
Query: 61 HSEGKLKGFGAVAAVRTGPDRSEWGK-EYRLFCGRGIKNIHVWSFKPEAEARGSSRVSRGKGHGGCGGLGKGEWACLYDTGTNGATVELVAFRN---GGLEGISKSNDANVRVWDLSGE------------GRTTKPPFRDIIFGDYAYGGTTSLSLVKLDAPAVANRMEIALPDAGV---SSPLAVRGXXXXXXXXXSARGKRHCRMLKDLAGTQ----DGRHVVLVCSDGSVLYHRHTQAVNTMRLE-PLEGVGVDEDDARPT----VALSLAGRAGLPVLMIAGGRERGGAGSGDVESQKELVLKVLPRSD 918
H++ KLKGFGA + G +RS+ + EY L G+GIKNIHVWSFKP +G W C+YD TNGA++ + FR G L+ ISKS+D +RVWDLS E R +PP++DI + G L+ + + N + + DA SS LA+ G S G+ LK + + D H +L SDGSV+++RH + + + + P DD + VAL+ G G+ + + E G G+ ++L+ LP++D
Sbjct: 506 HADAKLKGFGACKRLWNGWERSKNERPEYLLLTGKGIKNIHVWSFKPSCPGKGQQST----------------WTCIYDCPTNGASIHQLYFRTSNTGMLQSISKSDDQKIRVWDLSYEECRITSGSEDVSDRPKRPPYKDITSTEGTVGVCCHLAFASGEMGGMHNIVNVVGLDAESPYNSSELALPGGAQMLNCRPSRSGRSQRGDLKSVVNVEGLIFDASHALLQISDGSVVHYRHDVSGHPILEQCPSSMFKTSIDDGNTSHSKKVALARVGSEGMALYATSSWSENSGRGA--------IMLRALPKAD 795
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Match: B8C5I1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5I1_THAPS) HSP 1 Score: 123 bits (308), Expect = 2.320e-24 Identity = 98/291 (33.68%), Postives = 144/291 (49.48%), Query Frame = 1
Query: 46 IRTYTHSEGKLKGFGAVAAVRTGPDRSEWG----KEYRLFCGRGIKNIHVWSFKPEAEARGSSRVSRGKGHGGCGGLGKGEWACLYDTGTNGATVELVAFRNG--GLEGISKSNDANVRVWDLSGE-----------GRTTKPPFRDI--------IFGDYAYGGTTS----LSLVKLDAPAVA---NRMEIALP-DAGVSSPLAVRGXXXXXXXXXSARGKRHCRMLKDLAGTQ----DGRHVVLVCSDGSVLYHRHTQAVNTMRLE---PLEGVGVDEDDARPTVALSL 798
I+ H++ KLKGFGA A + G +R+ G EY LF G+GIKNIH+WSFKP SR +G+ + WACLYDT TNG ++ + FR+ GL GISKS+D +RVWDL+ E R +P + D+ + G YA+ + + ++L+ LDA V+ N E+ALP D+G+ +VR S G++ LK + D H +L SDGSV+++ H A + + L+ L +D D ++ L L
Sbjct: 367 IQVDRHADAKLKGFGACARLWNGWERAVKGGGERPEYLLFTGKGIKNIHIWSFKP-------SRPEKGE---------ESNWACLYDTQTNGTSISQLYFRHNATGLHGISKSDDQKLRVWDLTWEQKRVAEGRDDSDRPKRPSYVDVASTESTVGVCGTYAFALSAASEAIINLIPLDADDVSSPFNLTELALPQDSGMEQ--SVR---------PSRTGRQQRGELKSVVNVSGLEFDTTHALLNLSDGSVVHYSHDDAGHPLLLQCPPALTQTSIDADIQAASLGLPL 630
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Match: A0A662XIZ9_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XIZ9_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.090e-19 Identity = 82/249 (32.93%), Postives = 116/249 (46.59%), Query Frame = 1
Query: 52 TYTHSEGKLKGFGAVAAVRTGPDRSEWGKEYRLFCGRGIKNIHVWSFKPEAEARGSSRVSRGKGHGGCGGLGKGEWACLYDTGTNGATVELVAF-RNGGLEGISKSNDANVRVWDLSGEGRTT-------KPPFRDI--------IFGDYAYGGTTSLSLVKLDAPAVANRMEIALP----------DAGVSSPLA--VRGXXXXXXXXXSAR---GKRHCRMLKDLAGTQDGRHVVLVCSDGSVLYHR 705
+YT+S+ KLKGF A ++ + EYRL CG GIKNIH+W F + A G++ + W C++D TNG ++E + F R+ + ISKS NVR+W L E K D+ ++GDYAYGG SL++V L A+RM++ LP +A +S A +R A G RH R + +AG V +CSDGSV +HR
Sbjct: 414 SYTYSDPKLKGFAAAKSLYRAKTKKT---EYRLLCGIGIKNIHMWRFYQKPGAEGAAP--------------EWSWECVFDKQTNGISLEFITFHRSIADQFISKSEHQNVRIWHLEEEHDDATDSVIIRKKSHTDVKQTTDTIAVYGDYAYGGGESLAVVDLRT---ASRMDLDLPLSVKEQRAQLEAAKNSRAANSLRAWNPRGSRRRGAEDTSGMRHMRTVSQVAGQDLSPFTVGMCSDGSVFFHR 642
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Match: A0A3M6VP76_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VP76_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.310e-19 Identity = 80/265 (30.19%), Postives = 125/265 (47.17%), Query Frame = 1
Query: 52 TYTHSEGKLKGFGAVAAVRTGPDRSEWGKEYRLFCGRGIKNIHVWSFKPEAEARGSSRVSRGKGHGGCGGLGKGEWACLYDTGTNGATVELVAFR-NGGLEGISKSNDANVRVW----DLSGEGRTT---KPPFRDI--------IFGDYAYGGTTSLSLVKLDAPAVANRMEIALP----------DAGVSSPLA--VRGXXXXXXXXXSAR---GKRHCRMLKDLAGTQDGRHVVLVCSDGSVLYHRHTQAVNTMR-LEPLEG 750
++T+S+ KLKGF A ++ + EYRL CG GIKN+H+W F + + + W C++D TNG ++E ++F G + ISKS NVR+W D E + K D+ ++GDYAYGG+ SL+++ L+A A RM++ LP +A ++S A +R A G+RH R + +AG V +CSDGSV +H+ + + L+ +EG
Sbjct: 286 SHTYSDAKLKGFAAAKSLSLQENNRT---EYRLLCGIGIKNVHMWRFYQKKTDNANLEWT---------------WECVFDKQTNGISLEFISFHPTNGDQFISKSEHQNVRIWHLEEDYDDENDSVTICKKSHTDVKQTIDAVAVYGDYAYGGSESLAVIDLEA---ATRMDLDLPLSAKEQHAQREAAINSRTANPLRAWNPRGSRRRGAEDTSGQRHMRTVSKIAGQDASPFTVGMCSDGSVFFHQPKKEIGIATPLDYIEG 529 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8827.16355.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8827.16355.1 >prot_H-elongata_contig8827.16355.1 ID=prot_H-elongata_contig8827.16355.1|Name=mRNA_H-elongata_contig8827.16355.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=1492bp QEVSLAASRFDLNKCIRTYTHSEGKLKGFGAVAAVRTGPDRSEWGKEYRLback to top mRNA from alignment at H-elongata_contig8827:301..8851+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8827.16355.1 ID=mRNA_H-elongata_contig8827.16355.1|Name=mRNA_H-elongata_contig8827.16355.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=8551bp|location=Sequence derived from alignment at H-elongata_contig8827:301..8851+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8827:301..8851+ >mRNA_H-elongata_contig8827.16355.1 ID=mRNA_H-elongata_contig8827.16355.1|Name=mRNA_H-elongata_contig8827.16355.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=8952bp|location=Sequence derived from alignment at H-elongata_contig8827:301..8851+ (Himanthalia elongata Himel1 dioecious)back to top |