mRNA_H-elongata_contig879.16320.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig879.16320.1
Unique NamemRNA_H-elongata_contig879.16320.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Match: D8LJN0_ECTSI (Serine/Threonine Dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN0_ECTSI)

HSP 1 Score: 526 bits (1356), Expect = 1.830e-184
Identity = 259/347 (74.64%), Postives = 296/347 (85.30%), Query Frame = 2
Query:  176 MQTADSQEDDSVPAVSMTGILEAAARIAPHVNATPVLTCNALDSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPECRDVVTHSSGNHAQALAWAAAAKGIKAHIVMPNSSIAVKVDAVRDYGASVTFCENTKTGREDTAAAVLSGLPNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGLISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQSGTLCGHDGNMLPNTIADGLRTTLGNRTWPIVRDIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAAVGVAALMSPRMRGISSEVKRVGVVLCGGNVDVNALHNLLVPGAEVSP 1216
            M+ A  +      AVS+ GI +AAARI PHV+ TPV+TC ALD MSGGR+VF KCELFQKTGSFKARGACNAVLLTPPECRD+VTHSSGNHAQALAWAA+ KG+ AHIVMP++S+AVKV AVRDYGAS+T CENTK+GRE TAAAV+SG P S  +HPYNDPRVQCGQGTVGLEL+ QVK+ TGG  LDAV+VP+GGGGLI+GV+TAVKALCPGI + GAEP+ AADAFRSKQSG+L GHD   +P+TIADGLRTTLG+ TWP+VRD VDEI+TVSEEEIR WMR++YERMKLVIEPSAAVGVAALMSPR+RG+  +VKRVGVVLCGGNVDV  L +LL       P
Sbjct:    1 MEEASHEPSAEPEAVSIAGIRQAAARIGPHVHYTPVMTCRALDEMSGGREVFLKCELFQKTGSFKARGACNAVLLTPPECRDIVTHSSGNHAQALAWAASVKGVNAHIVMPHNSMAVKVAAVRDYGASITLCENTKSGRETTAAAVVSGHPLSTLIHPYNDPRVQCGQGTVGLELVQQVKEQTGGAGLDAVVVPVGGGGLITGVATAVKALCPGIRVIGAEPSKAADAFRSKQSGSLQGHDCEGMPDTIADGLRTTLGSTTWPVVRDSVDEIVTVSEEEIRLWMRVVYERMKLVIEPSAAVGVAALMSPRVRGMPQDVKRVGVVLCGGNVDVTLLQDLLAGDGNPLP 347          
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Match: D7FHM2_ECTSI (Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHM2_ECTSI)

HSP 1 Score: 474 bits (1219), Expect = 2.510e-163
Identity = 242/333 (72.67%), Postives = 279/333 (83.78%), Query Frame = 2
Query:  200 DDSVPAV-SMTGILEAAARIAPHVNATPVLTCNALDSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPECRDVVTHSSGNHAQALAWAAAAKGIKAHIVMPNSSIAVKVDAVRDYGASVTFCENTKTGREDTAAAVLSGLPNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGLISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQSGTLCGH-DGNMLPNTIADGLRTTLGNRTWPIVRDIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAAVGVAALMSPRMRGISSEVKRVGVVLCGGNVDVNALHNLL 1192
            D S PAV S+ GI EAA RI+PH   TPVLTC AL+ MSG R+VFFKCELFQKTGSFKARGACNAVLLTPPEC  VVTHSSGNHAQALAWAA+ +GI AHIVMP S +AVKVDAVR YGASVT CEN+K+ RE TAA ++S LP S+ +H  ND RVQCG GT+GLEL+ QVKD+TGG  LDAVIV IGGGGLISGV+TAVKALCP   I GA+P  AADAF+SKQSGTLC   +G  LP+TIADGLRT+LGN+ WP+VRD VDEI+TVSE++IR WM ++Y+RMKLVIEPSAAVGVAALMSP++R + SE+++VGVVLCGGNVDV  L +LL
Sbjct:   30 DGSSPAVLSLAGIREAADRISPHTQITPVLTCGALNEMSG-REVFFKCELFQKTGSFKARGACNAVLLTPPECPGVVTHSSGNHAQALAWAASVRGIPAHIVMPRSCMAVKVDAVRGYGASVTLCENSKSSRESTAADIVSKLPGSSLIHSSNDARVQCGIGTIGLELVSQVKDLTGGADLDAVIVTIGGGGLISGVTTAVKALCPNARIIGAQPEKAADAFKSKQSGTLCSPAEGEALPDTIADGLRTSLGNKAWPVVRDSVDEIVTVSEDDIRVWMGVVYKRMKLVIEPSAAVGVAALMSPQVRAMPSEMRKVGVVLCGGNVDVTLLQDLL 361          
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Match: A0A835Z2N3_9STRA (Serine/Threonine dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2N3_9STRA)

HSP 1 Score: 330 bits (846), Expect = 4.320e-105
Identity = 192/396 (48.48%), Postives = 238/396 (60.10%), Query Frame = 2
Query:  218 VSMTGILEAAARIAPHVNATPVLTCNALDSMSG-GRQVFFKCELFQKTGSFKARGACNAVLLTPPECRDVVTHSSGNHAQALAWAAAAKGIKAHIVMPNSSIAVKVDAVRD---------------------YGASVTFCENTKTGREDTAAAVLSGLPNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGLISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQS---GTLCGHDGNM----------------------------------------------LPNTIADGLRTTLGNRTWPIVRDIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAAVGVAALMSPRMRGISSEVKRVGVVLCGGNVDVNALHNLL 1192
            V +  I  AA RI P+V+ TPV+TC  +D ++G GRQ+ FKCELFQKTGSFKARGACNA LL PP CR VVTHSSGNHAQALAWAA  +G++AH VMPN + A                             YGA V  C  +   R  TAAA++    ++  VH  NDPRV  GQGTVGLEL+ QV++M GG  LDAVIVP+GGGGL++GV+ AV+ALCP   + GAEP+ A DA RSK     G  C + G+                                               LP+T+ADGLRT LG+ TWP+VRD VD I+TVSE+EIR  +R++YER+KL IEPSAAVGVAA +S  +  +   ++R+GVVLCGGNVD+  L  LL
Sbjct:  107 VCLASIQAAARRIEPYVHRTPVMTCEGIDKLAGHGRQLIFKCELFQKTGSFKARGACNATLLLPPSCRAVVTHSSGNHAQALAWAAQVRGVRAHCVMPNDASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGADVVLCTPSYGARVSTAAALVREH-DAVLVHSSNDPRVIDGQGTVGLELVEQVREMCGGADLDAVIVPVGGGGLLAGVAVAVRALCPRALVIGAEPSAADDAARSKVRFCCGVYCAYAGSAMCLEVLVRRFRSVSEVRCALAIGAQPSAADGAARSKAAGMLLEHDTLPDTLADGLRTVLGSWTWPVVRDQVDCIVTVSEDEIRASLRLVYERLKLAIEPSAAVGVAAALSDAVAAMPG-LRRIGVVLCGGNVDMAQLARLL 500          
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Match: A0A4D9D9L6_9STRA (PALP domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9L6_9STRA)

HSP 1 Score: 318 bits (815), Expect = 4.860e-102
Identity = 186/339 (54.87%), Postives = 226/339 (66.67%), Query Frame = 2
Query:  218 VSMTGILEAAARIAPHVNATPVLTCNAL-------DSMSGGR-QVFFKCELFQKTGSFKARGACNAVLLTPPECRDVVTHSSGNHAQALAWAAAAKGIKAHIVMPNSSIAVKVDAVRDYGASVTFCENTKTGREDTAAAVLSGLPNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGLISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQSGTLCGHDGNMLPNTIADGLRTTLGNRTWPIVR-DIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAAVGVAALMSPRMRGISSEV------KRVGVVLCGGNVDVNALHNL 1189
            + +  + EAA  I   V  TPVL C+A+       DS S  + + FFKCELFQKTGSFK RGA NAV   P    DVVTHSSGNHAQALAWAA  KG++AHIVMP ++  VKVDAV+ YG  V  CE T   R   A  +++     A VHP +D  V  GQGTV LE + QV++ TGG+SLDA+I+P+GGGGL+ G++ A KAL P I I GAEP+M  DAFRSK +G LC H  +  P +IADGL T LG RT+PIV  D VD IITVSE+EI + MR++YERMKLVIEPSA VGVA  M    RG   E       +RVGVVLCGGN+D++ L  +
Sbjct:   18 IDLALVQEAAQTIKASVQRTPVLRCHAIEHAALRNDSNSSFKPEFFFKCELFQKTGSFKVRGALNAVAHLPSTVTDVVTHSSGNHAQALAWAARTKGLRAHIVMPRTAPKVKVDAVKGYGGQVYLCEPTVEARWAMAGELVAST-GGALVHPSDDYPVMAGQGTVALEFLEQVEEETGGKSLDALIIPVGGGGLLGGMAVAAKALHPHIKIIGAEPSMVDDAFRSKAAGHLCLHP-SPSPRSIADGLLTVLGQRTYPIVSSDKVDAIITVSEQEIAQAMRLVYERMKLVIEPSAGVGVAVAM----RGDELEAVLGIGCRRVGVVLCGGNLDMDRLDGI 350          
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Match: A0A6P8ITW0_ACTTE (L-serine ammonia-lyase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ITW0_ACTTE)

HSP 1 Score: 317 bits (811), Expect = 1.240e-101
Identity = 170/327 (51.99%), Postives = 229/327 (70.03%), Query Frame = 2
Query:  218 VSMTGILEAAARIAPHVNATPVLTCNALDSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPECRD-----VVTHSSGNHAQALAWAAAAKGIKAHIVMPNSSIAVKVDAVRDYGASVTFCENTKTGREDTAAAVLSGL-PNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGLISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQSGTLCGHDGNMLPNTIADGLRTTLGNRTWPIVRDIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAAVGVAALMSPRMRGISSEVKRVGVVLCGGNVDVNAL 1180
            V++  + +A+ RIAP +N TPV+TC  LD M+G + ++FKCE+FQK G+FK RGA NAVL     C +     VVTHSSGNH QALA AA  KG+KAHIVMPN++ A+K  AV+DYGA++  CE ++  RE  AA VL    PNS  V PY++  +  GQGT+ LEL+ QV D      LDA++VP+GGGG++SG+  A K + P I IF AEP +A D  +S  +G      G   P T+ADGL+T+LG  TWPI+RD +D++ITV+E EI   MR+++ERMKLVIEPSAAV VAA++S R RG +  V++V V+LCGGNV++++L
Sbjct:   46 VTLKDVQDASVRIAPFINRTPVMTCGTLDKMAG-KSLYFKCEIFQKVGAFKFRGAMNAVLNITENCSEAELPVVVTHSSGNHGQALALAAKVKGLKAHIVMPNNAPAIKKAAVKDYGANIVECEISQQDREAAAARVLKETGPNSYLVPPYDNKHIIAGQGTMALELLEQVPD------LDAIVVPVGGGGMLSGICVAAKGIKPSIKIFAAEPLLADDCAKSFAAGKRIPLPGP--PATVADGLKTSLGFITWPIIRDNIDDVITVTESEIISTMRLVWERMKLVIEPSAAVAVAAVLSERFRGENKNVEKVAVILCGGNVNLDSL 363          
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Match: A0A424KW82_9BACT (Pyridoxal-phosphate dependent enzyme n=1 Tax=Phycisphaera sp. TMED9 TaxID=1986611 RepID=A0A424KW82_9BACT)

HSP 1 Score: 313 bits (801), Expect = 9.800e-101
Identity = 178/326 (54.60%), Postives = 223/326 (68.40%), Query Frame = 2
Query:  221 SMTGILEAAARIAPHVNATPVLTCNALDSMSGGRQVFFKCELFQKTGSFKARGACNAVL-LTPPECRD-VVTHSSGNHAQALAWAAAAKGIKAHIVMPNSSIAVKVDAVRDYGASVTFCENTKTGREDTAAAVLSGLPNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGLISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQSGTLCGHDGNMLPNTIADGLRTTLGNRTWPIVRDIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAAVGVAALMSPRMRGISSEVKRVGVVLCGGNVDVNALHNLL 1192
            ++  I  AA RI PHV+ TPVLTC A+D ++G  +VF KCE  QK G+FKARGA NAV  LT  E    VVTHSSGNHAQALAWAA  +GI AHIVMP ++ AVK  AV  YG  V  CE T   R +T   V         + PY+D RV  GQGT+GLEL+ QV D      LDA++VP+GGGG+I+G++   KAL P + I GAEP +  DA RS+ SG +  H G+    TIADGLRTTLG RT+P++R++VD+IITV E EIR+ +R++ ER KLVIEPSAAVG+AA  SP  R      +R+GVVLCGGN+D++AL +LL
Sbjct:   10 NLDAIRTAARRIEPHVHRTPVLTCQAIDEVAGC-EVFLKCENLQKVGAFKARGASNAVFSLTDAEAEPGVVTHSSGNHAQALAWAAGRRGIPAHIVMPTNAPAVKKKAVLGYGGIVHDCEPTLESRLETCRKVAEDT-GGTVIPPYDDDRVIAGQGTIGLELLGQVPD------LDAIVVPVGGGGMIAGIAICAKALSPRLEILGAEPELVDDAARSRLSGRIEPHAGDPT-RTIADGLRTTLGKRTFPVIRELVDDIITVPETEIRQGLRLVMERAKLVIEPSAAVGIAATRSPAFRARGH--RRIGVVLCGGNLDLDALPSLL 324          
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Match: A0A7S2Y2H5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2H5_9STRA)

HSP 1 Score: 312 bits (800), Expect = 2.940e-100
Identity = 164/333 (49.25%), Postives = 222/333 (66.67%), Query Frame = 2
Query:  218 VSMTGILEAAARIAPHVNATPVLTCNALDSMSGG-RQVFFKCELFQKTGSFKARGACNAVLLTPPEC-------RDVVTHSSGNHAQALAWAAAAKGIKAHIVMPNSSIAVKVDAVRDYGASVTFCENTKTGREDTAAAVLSGLPNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGLISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQSGTLCGHDGNMLPNTIADGLRTTLGNRTWPIVRDIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAAVGVAALMSPRMRGISSEVKRVGVVLCGGNVDVNALHNLL 1192
            +S   I EA  RI   ++ TPVL  +++  M+G  R++FFKCELFQK GSFK RGA NAV+L   +        ++V+T SSGN  QA+AW    +G+ AH+VMPN S   K+DAV  YGA++  CE T   R          L  + +VHP+ DP V CGQGTVGLEL+ QV++MTGG  +DAV+VP+GGGGL SGV+ AVKA+ PG  + G EP MA+ A  S+++G L     N LPNT+ADGLR ++G  TWPI+RD+VD+++TVSE +I+  ++++  RMKL IEPSAAV +AA +          + R+GV+LCGGNVD++ L NLL
Sbjct:   16 ISFPNIQEAHKRIQGILHRTPVLKSSSISKMAGHERELFFKCELFQKAGSFKPRGALNAVILAENDADEKGRKLQNVITQSSGNMGQAVAWVCQNRGLTAHVVMPNDSAQCKMDAVAGYGANIILCEPTIEARNKATEKAQEEL-GAKYVHPHQDPHVVCGQGTVGLELVEQVREMTGGMDMDAVLVPVGGGGLCSGVAVAVKAMSPGTKVIGVEPEMASSAKPSREAGNLISM--NSLPNTLADGLRVSVGPITWPIMRDVVDDVVTVSEAQIQDTLKLVVSRMKLAIEPSAAVALAAALYSEDIKKKEGLHRIGVILCGGNVDMSRLSNLL 345          
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Match: A0A2E3RP26_9BACT (Serine dehydratase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3RP26_9BACT)

HSP 1 Score: 310 bits (795), Expect = 7.860e-100
Identity = 174/324 (53.70%), Postives = 225/324 (69.44%), Query Frame = 2
Query:  215 AVSMTGILEAAARIAPHVNATPVLTCNALDSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPEC--RDVVTHSSGNHAQALAWAAAAKGIKAHIVMPNSSIAVKVDAVRDYGASVTFCENTKTGREDTAAAVLSGLPNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGLISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQSGTLCGHDGNMLPNTIADGLRTTLGNRTWPIVRDIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAAVGVAALMSPRMRGISSEVKRVGVVLCGGNVDVNAL 1180
            A ++  IL A  RI PHVN TPV TC+ +D M+G R++ FKCE FQK G+FK RGACNAV+    +     VVTHSSGNHAQALA AA  +GI AHIVMP+++  VK  AV  YGA +  CE     RE TAA V S    +  + PYN P +  GQGT+ +EL+ QV        LDA++VP+GGGG+++GV+ A KA+ PGI +F AEP  A DAFRSKQSG++   +    P+TIADGLRTTLG  T+P++RD+V++++ VSE+EI   MR+++ERMKLVIEPSA VG+AA +S R R I   +  VGVVLCGGNVD++ L
Sbjct:   10 AATIDDILGANRRIDPHVNRTPVHTCSTIDGMAG-RKLHFKCENFQKIGAFKFRGACNAVMKLEEDAARHGVVTHSSGNHAQALALAARIRGIPAHIVMPSNAPGVKRRAVEGYGAIIYECEPNVRSRETTAAEVASRT-GATMIEPYNHPDIIAGQGTMSVELLEQVPH------LDALVVPVGGGGMLAGVTIAAKAIKPGIRVFAAEPEAADDAFRSKQSGSIEPMEN---PDTIADGLRTTLGTLTFPVLRDLVEQVLPVSEQEIVSAMRLVWERMKLVIEPSAGVGIAAALSDRFRAIDG-MDHVGVVLCGGNVDLDDL 321          
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Match: A0A0F6VZC4_9DELT (Threonine dehydratase, catabolic n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6VZC4_9DELT)

HSP 1 Score: 303 bits (776), Expect = 5.710e-97
Identity = 170/330 (51.52%), Postives = 220/330 (66.67%), Query Frame = 2
Query:  215 AVSMTGILEAAARIAPHVNATPVLTCNALDSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPE--CRDVVTHSSGNHAQALAWAAAAKGIKAHIVMPNSSIAVKVDAVRDYGASVTFCENTKTGREDTAAAVLSGLPNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGLISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQSGTLCGHDGNMLPNTIADGLRTTLGNRTWPIVRDIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAAVGVAALMSPRMRGISSEVKRVGVVLCGGNVDVNALHNLLVP 1198
            A  +  + EAA RI P    TPV+T + +D+ SG R++FFKCE FQ+ G+FK RGACNAV+        R V THSSGNHAQALA AA  +GI AH+VMP S+ A+K +AV  YGA+V  C  T   RE+TAA V++    +  + PY+ P V  GQGT+ LEL+ ++ D      LDA++VPIGGGG+ISG++ A + L P + +  AEP  A DA RSK  G L    G   P TIADGL T+LG+ TWP+VRD+VD +ITV E+ I R MR+++ERMKLVIEPSAAVGVA  +S  MR +    +RVGVVLCGGNV ++ L  +  P
Sbjct:    6 AADLAAVREAAERIRPWAIRTPVMTSSTMDARSG-RELFFKCETFQRVGAFKFRGACNAVMKLDDATAARGVATHSSGNHAQALALAAKLRGIPAHVVMPTSAPAIKKEAVLGYGANVIPCAPTLAAREETAARVVAET-GATLIPPYDHPDVIAGQGTIALELLDEIAD------LDAIVVPIGGGGMISGIALAARELAPRVKVIAAEPAGADDAARSKAGGALVPQTG---PKTIADGLLTSLGSLTWPVVRDVVDRVITVDEDAIVRAMRLVFERMKLVIEPSAAVGVAVALSDAMREVEG-AQRVGVVLCGGNVALDRLPWITRP 323          
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Match: A0A2E3Q501_9BACT (Serine dehydratase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3Q501_9BACT)

HSP 1 Score: 301 bits (770), Expect = 4.430e-96
Identity = 170/316 (53.80%), Postives = 214/316 (67.72%), Query Frame = 2
Query:  251 RIAPHVNATPVLTCNALDSMSGGRQVFFKCELFQKTGSFKARGACNAVLLTPPE--CRDVVTHSSGNHAQALAWAAAAKGIKAHIVMPNSSIAVKVDAVRDYGASVTFCENTKTGREDTAAAVLSGLPNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGLISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQSGTLCGHDGNMLPNTIADGLRTTLGNRTWPIVRDIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAAVGVAALMSPRMRGISSEVKRVGVVLCGGNVDVNALHNLL 1192
            RI P V+ TPV+ C A+D   G  +V  KCE  QK G+FKARGA NAVL    E   R VVTHSSGNHAQALAWAA  +G+ AHIVMP ++  VK  AV  YG  +  C  T   R +T A++         + PY+D RV  GQGT+ LELI QV D      L AV+VP+GGGG+ISGV+T +K +  GI + GAEP++A DA RSKQ+G++  H G+    TIADGLRTTLG RT+PI+RD+VDEI+TV E+ IR  +R++ ER KLVIEPSAAVG+A  M P  R     ++R+GVVLCGGN+D+ AL +LL
Sbjct:   16 RIEPFVHRTPVMRCRAIDDRVGC-EVHLKCENLQKVGAFKARGAMNAVLSLDDETVARGVVTHSSGNHAQALAWAARERGVPAHIVMPTNAPEVKRRAVEGYGGIIHACRPTLESRLETCASIAEKT-GGTVIPPYDDDRVIAGQGTLALELIAQVPD------LQAVVVPVGGGGMISGVATVMKGMDAGITVIGAEPSLADDACRSKQTGSIQPHLGDPTA-TIADGLRTTLGERTFPIIRDLVDEIVTVQEDHIRAALRLVLERSKLVIEPSAAVGIAVAMQPAFR--ERGLERIGVVLCGGNLDLEALPDLL 320          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig879.16320.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN0_ECTSI1.830e-18474.64Serine/Threonine Dehydratase n=2 Tax=Ectocarpus Ta... [more]
D7FHM2_ECTSI2.510e-16372.67Serine Racemase n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A835Z2N3_9STRA4.320e-10548.48Serine/Threonine dehydratase n=1 Tax=Tribonema min... [more]
A0A4D9D9L6_9STRA4.860e-10254.87PALP domain-containing protein n=2 Tax=Monodopsida... [more]
A0A6P8ITW0_ACTTE1.240e-10151.99L-serine ammonia-lyase n=1 Tax=Actinia tenebrosa T... [more]
A0A424KW82_9BACT9.800e-10154.60Pyridoxal-phosphate dependent enzyme n=1 Tax=Phyci... [more]
A0A7S2Y2H5_9STRA2.940e-10049.25Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2E3RP26_9BACT7.860e-10053.70Serine dehydratase n=1 Tax=Phycisphaerae bacterium... [more]
A0A0F6VZC4_9DELT5.710e-9751.52Threonine dehydratase, catabolic n=2 Tax=Sandaraci... [more]
A0A2E3Q501_9BACT4.430e-9653.80Serine dehydratase n=1 Tax=Phycisphaerae bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig879contigH-elongata_contig879:14405..18072 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score527.3
Seed ortholog evalue5.3e-147
Seed eggNOG ortholog2880.D8LJN0
EggNOG free text desc.serine racemase
EggNOG OGsCOG1171@1,KOG1251@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size1354
Cds size1047
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig879.16320.1prot_H-elongata_contig879.16320.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig879 14537..17897 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931280.3904138-UTR-H-elongata_contig879:14404..145361622931280.3904138-UTR-H-elongata_contig879:14404..14536Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig879 14405..14536 -
1691679771.4862525-UTR-H-elongata_contig879:14404..145361691679771.4862525-UTR-H-elongata_contig879:14404..14536Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig879 14405..14536 -
1622931280.4452105-UTR-H-elongata_contig879:17897..180721622931280.4452105-UTR-H-elongata_contig879:17897..18072Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig879 17898..18072 -
1691679771.5208802-UTR-H-elongata_contig879:17897..180721691679771.5208802-UTR-H-elongata_contig879:17897..18072Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig879 17898..18072 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931280.407871-CDS-H-elongata_contig879:14536..153041622931280.407871-CDS-H-elongata_contig879:14536..15304Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig879 14537..15304 -
1691679771.5015163-CDS-H-elongata_contig879:14536..153041691679771.5015163-CDS-H-elongata_contig879:14536..15304Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig879 14537..15304 -
1622931280.4268107-CDS-H-elongata_contig879:17618..178971622931280.4268107-CDS-H-elongata_contig879:17618..17897Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig879 17619..17897 -
1691679771.5102801-CDS-H-elongata_contig879:17618..178971691679771.5102801-CDS-H-elongata_contig879:17618..17897Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig879 17619..17897 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig879.16320.1

>prot_H-elongata_contig879.16320.1 ID=prot_H-elongata_contig879.16320.1|Name=mRNA_H-elongata_contig879.16320.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=349bp
MQTADSQEDDSVPAVSMTGILEAAARIAPHVNATPVLTCNALDSMSGGRQ
VFFKCELFQKTGSFKARGACNAVLLTPPECRDVVTHSSGNHAQALAWAAA
AKGIKAHIVMPNSSIAVKVDAVRDYGASVTFCENTKTGREDTAAAVLSGL
PNSAFVHPYNDPRVQCGQGTVGLELIHQVKDMTGGQSLDAVIVPIGGGGL
ISGVSTAVKALCPGIHIFGAEPNMAADAFRSKQSGTLCGHDGNMLPNTIA
DGLRTTLGNRTWPIVRDIVDEIITVSEEEIRRWMRIIYERMKLVIEPSAA
VGVAALMSPRMRGISSEVKRVGVVLCGGNVDVNALHNLLVPGAEVSPE*
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mRNA from alignment at H-elongata_contig879:14405..18072-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig879.16320.1 ID=mRNA_H-elongata_contig879.16320.1|Name=mRNA_H-elongata_contig879.16320.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3668bp|location=Sequence derived from alignment at H-elongata_contig879:14405..18072- (Himanthalia elongata Himel1 dioecious)
GTTTCAGTATAACCCGCGAAAGCAGTTTGACAAGCTTCCGTTGAGCACCA TAATCATCAGTGTTGGGGAGAATCATAAAGTCTACGCAATATTCCTTAAT CATACTAACTGTAAACAATAGCAGGCTTCGAGGTGCAGTTAGCGTGAGAG CTCAGGTCTCGATTCCAGGGTCAAGATGCAGACAGCAGACTCTCAGGAGG ACGACTCTGTACCAGCTGTGTCTATGACCGGAATCCTGGAGGCTGCAGCT CGCATAGCTCCGCATGTGAATGCTACGCCAGTGCTGACGTGTAACGCTCT AGATAGTATGAGTGGAGGTCGCCAGGTGTTTTTCAAGTGCGAGCTCTTCC AGAAGACTGGATCATTCAAAGCTAGGGGCGCATGCAATGCGGTGCTGCTG ACCCCACCCGAGTGCAGGGACGTCGTGACACACTCCAGCGGTAACCATGC CCAGGTTATGTTCTGTTCGAGACATCCATTATTTTGAGAACGGATGAAAC ATTTGTAGAGGTTCATAGGTGGTGGCTGCGTTCCGAGTTCACCCTTCGTC TTGACCCAGGCACTATACTGTACGTACTAAGTGTATACCCCTTTATTACA GCTTTCTTCTAAGTATTAGAGCTATAGAATGTAGAACTCGATATCGGTAA TAAATAACACCCTTTTCAATCGAACACTTTATATTCAATAATATGTAAGA GTAATCACTGGATATGTCCTTGTGACCACGGGCTGGATTTTGACATCAGC TTATGTGAGAATTCAATCAAATCAATATATCGATGTCCTGCGATAAAGCT TTCCCTCCTTCCCTAATCTCTAATCTTGACAAGAAGAAGGTGTGGATGTT CGGAGAGTTAGAATAAGCCTAAAGTCTTTTAAATAAAAATAATAGTACAT GTTTGATGACATACTTTCTCTCATGAAAAAAATGCACTAACATACCTAGG TATTTTAAACAAAAATAATGTACACACTATAACTTTACGGCAGTTGGTAC CGTTGATTTTGATTTTACCACTCGTGGTGTAAGGACGTTAGGTGTGGGAT GTTCGGAGGGTTTGACTGAGATCATTTTTTTTTTAGAAAATAACCAAGCT CCTATCAGTTCGACCCCATCATCATCATTATAGTAGGGCTGCCCAGTGTG ATCCATAGTGCTGAACTCCCGAGAGTAGAGATGAACAACTCTGTATCTAT CTATCTCAAGTTTTGTATCTCGGGTGGCATACTGGTTGGTTTTTTCTCTC TTATGGATATAGACTTTTTTTTTTTTCCTTTCTGTTACTTATGATATAGA TGTTCGCTACCTCCTACACACCCTTCATCTCCGGTAGCTACCGGTAGATG CCCTTCTCTTATCTCGCGTTTCTATTCTTGGCTTGACTAATCGAATATTG ACCCATTGATACATAGTGTTCTAGTGCCTATAACTGATGTACAATTGAAT CTTGAGCCACGACCTCTTGTAATGTGAGCTATTTTCTTCTGAGGATTTTA TGCTCATAGAGGTAAGGAATTTAGACACTCTAACCTGACGATAGATAGTG GGCCCCCCTGACTTAGACCACTTGTGTTGTAATGAAGTATATATATAAGA TATAGTGTGGATGTTCGGAGGGTTTGATTGAGTTCATACGTTTTTATATT AAAAAATAAAGAAAACGTGTAGAAGGCGTGAACCGCGGGGAGAGATGGGT CCATCCTCCTTAGGACCACGGCGAAGATGAGATTGGCAACCTAGCAGGTT GAACGACCCCATCCACAGAATGTGAGATTAAAAAAGAAATACCTGGTACA TCGATATGGACATACTTCGTATAGACTATAGAGTTGATCTCATCACGCTC CCGACGTGGCAATCATTCTGTAAAATATATTTAAACTTATTCGAACCCTC CGAGCATCTATAACCATCCATAGCCCGAGCGGATTTCTGAAACCACAAGA AGAGAAGACAAGCTCCATGCTACCCAAATTATCTCCTTCTATGCTTCATT ATTCCACGAAAACCCGTGGCGAAAGGCGGGAGATCTTCCGACAGGATAGT AGTTAGCTAAAGCCTAAAAGAGTTCGAGAATTTCGAAGGGTATAACGTAA GGCCAGATGGGCGTACAGCTGTAGGTGGGGTACAGTAGGGAGAAGCGTAC GTATGGTACTGCTACAGTAGGGCGAGTTACTTAAAAGTACAACGAACTCT AGCTTGATCGTGCTAGCGCTATCATAGTAGGATTGGTCAAGCGTAAATCA CGAAGGACTGGAGTTTATCAGTACGCATTATACTATGCTTGTAGCTGTTT GGCAATTATCGGTTTCCAACAGAGGTATTTTGAGTAATTGCTCAGCAGAC TCGGCTTGGGTGAACACTTGACAACACATGACATGTTTTTGTATCGTCTT TCTTTTTCAAAGAAAACGATCTCCGCCCGCGGAGGGTTTCCAGCTTGCTA CAAGAGGTCTGACCTCCGGACACCAATAGCTAGTGCTGTCTTCTGTTTTG AGAATAAATCAGACGCCGGGCAAAGAAAAGAGCAACGTACCAAACGTCCT TGACAAACTAACATTTATCTAGGAGGCCTTACCTACCACAGCAGCTTATT CTCTGTAACATGAAGGGCCTCACGCAGATCGCTTTTAGATACTCAAGCAT AGATGAAATATCGCAGACGTCGGCTCCGATGGATTTTCATCGATCGCTCC AAAAGCTTATGAGAATGCCAACTGTTATCCGTGCTGTCCATCCTGGCCCG TTGTTTGTGAGTATTCAGGCTCTAGCGTGGGCGGCGGCAGCGAAAGGCAT CAAAGCCCACATCGTAATGCCGAACAGCTCGATTGCGGTCAAGGTCGACG CTGTTCGCGACTACGGGGCGAGCGTGACCTTCTGCGAGAACACCAAGACC GGGCGAGAGGACACCGCGGCCGCGGTGCTGTCGGGGCTGCCTAATTCAGC ATTCGTACATCCCTACAACGATCCACGCGTGCAATGCGGCCAGGGCACGG TCGGCTTGGAGCTGATTCATCAGGTGAAGGACATGACCGGAGGCCAAAGT CTCGACGCGGTCATCGTGCCGATAGGCGGCGGCGGGCTCATCAGCGGCGT GTCGACAGCCGTGAAGGCCCTCTGTCCGGGCATCCATATTTTCGGAGCGG AGCCGAACATGGCGGCGGACGCGTTCAGGTCGAAGCAGAGCGGGACGCTG TGTGGGCACGATGGCAATATGTTGCCAAACACAATTGCTGACGGTTTGCG GACCACTCTAGGCAACAGAACGTGGCCTATTGTGAGAGACATCGTTGACG AAATCATCACGGTATCGGAAGAGGAGATTCGTCGATGGATGCGGATTATC TACGAGCGGATGAAACTCGTGATCGAGCCCAGCGCAGCCGTGGGGGTAGC CGCGCTGATGTCGCCGCGAATGCGAGGCATATCCAGCGAAGTTAAAAGGG TAGGAGTGGTGCTGTGCGGGGGAAACGTCGACGTGAACGCTCTGCACAAT CTGCTAGTACCAGGAGCTGAAGTGTCTCCTGAGTGATAACGACCGCCGTG AATGGCTTGGTAGCGCACATTTGAGTACTTGGGCTTTACACTTTTCTATG TAGACAGAGGGGGCGGGGGAGACACGATTCACTAAGTGCTTTCGTTAACA CCTGATATACAAGAGGGG
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Coding sequence (CDS) from alignment at H-elongata_contig879:14405..18072-

>mRNA_H-elongata_contig879.16320.1 ID=mRNA_H-elongata_contig879.16320.1|Name=mRNA_H-elongata_contig879.16320.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2094bp|location=Sequence derived from alignment at H-elongata_contig879:14405..18072- (Himanthalia elongata Himel1 dioecious)
ATGCAGACAGCAGACTCTCAGGAGGACGACTCTGTACCAGCTGTGTCTAT
GACCGGAATCCTGGAGGCTGCAGCTCGCATAGCTCCGCATGTGAATGCTA
CGCCAGTGCTGACGTGTAACGCTCTAGATAGTATGAGTGGAGGTCGCCAG
GTGTTTTTCAAGTGCGAGCTCTTCCAGAAGACTGGATCATTCAAAGCTAG
GGGCGCATGCAATGCGGTGCTGCTGACCCCACCCGAGTGCAGGGACGTCG
TGACACACTCCAGCGGTAACCATGCCCAGATGCAGACAGCAGACTCTCAG
GAGGACGACTCTGTACCAGCTGTGTCTATGACCGGAATCCTGGAGGCTGC
AGCTCGCATAGCTCCGCATGTGAATGCTACGCCAGTGCTGACGTGTAACG
CTCTAGATAGTATGAGTGGAGGTCGCCAGGTGTTTTTCAAGTGCGAGCTC
TTCCAGAAGACTGGATCATTCAAAGCTAGGGGCGCATGCAATGCGGTGCT
GCTGACCCCACCCGAGTGCAGGGACGTCGTGACACACTCCAGCGGTAACC
ATGCCCAGGCTCTAGCGTGGGCGGCGGCAGCGAAAGGCATCAAAGCCCAC
ATCGTAATGCCGAACAGCTCGATTGCGGTCAAGGTCGACGCTGTTCGCGA
CTACGGGGCGAGCGTGACCTTCTGCGAGAACACCAAGACCGGGCGAGAGG
ACACCGCGGCCGCGGTGCTGTCGGGGCTGCCTAATTCAGCATTCGTACAT
CCCTACAACGATCCACGCGTGCAATGCGGCCAGGGCACGGTCGGCTTGGA
GCTGATTCATCAGGTGAAGGACATGACCGGAGGCCAAAGTCTCGACGCGG
TCATCGTGCCGATAGGCGGCGGCGGGCTCATCAGCGGCGTGTCGACAGCC
GTGAAGGCCCTCTGTCCGGGCATCCATATTTTCGGAGCGGAGCCGAACAT
GGCGGCGGACGCGTTCAGGTCGAAGCAGAGCGGGACGCTGTGTGGGCACG
ATGGCAATATGTTGCCAAACACAATTGCTGACGGTTTGCGGACCACTCTA
GGCAACAGAACGTGGCCTATTGTGAGAGACATCGTTGACGAAATCATCAC
GGTATCGGAAGAGGAGATTCGTCGATGGATGCGGATTATCTACGAGCGGA
TGAAACTCGTGATCGAGCCCAGCGCAGCCGTGGGGGTAGCCGCGCTGATG
TCGCCGCGAATGCGAGGCATATCCAGCGAAGTTAAAAGGGTAGGAGTGGT
GCTGTGCGGGGGAAACGTCGACGTGAACGCTCTGCACAATCTGCTAGTAC
CAGGAGCTGAAGTGTCTCCTGAGTGAGCTCTAGCGTGGGCGGCGGCAGCG
AAAGGCATCAAAGCCCACATCGTAATGCCGAACAGCTCGATTGCGGTCAA
GGTCGACGCTGTTCGCGACTACGGGGCGAGCGTGACCTTCTGCGAGAACA
CCAAGACCGGGCGAGAGGACACCGCGGCCGCGGTGCTGTCGGGGCTGCCT
AATTCAGCATTCGTACATCCCTACAACGATCCACGCGTGCAATGCGGCCA
GGGCACGGTCGGCTTGGAGCTGATTCATCAGGTGAAGGACATGACCGGAG
GCCAAAGTCTCGACGCGGTCATCGTGCCGATAGGCGGCGGCGGGCTCATC
AGCGGCGTGTCGACAGCCGTGAAGGCCCTCTGTCCGGGCATCCATATTTT
CGGAGCGGAGCCGAACATGGCGGCGGACGCGTTCAGGTCGAAGCAGAGCG
GGACGCTGTGTGGGCACGATGGCAATATGTTGCCAAACACAATTGCTGAC
GGTTTGCGGACCACTCTAGGCAACAGAACGTGGCCTATTGTGAGAGACAT
CGTTGACGAAATCATCACGGTATCGGAAGAGGAGATTCGTCGATGGATGC
GGATTATCTACGAGCGGATGAAACTCGTGATCGAGCCCAGCGCAGCCGTG
GGGGTAGCCGCGCTGATGTCGCCGCGAATGCGAGGCATATCCAGCGAAGT
TAAAAGGGTAGGAGTGGTGCTGTGCGGGGGAAACGTCGACGTGAACGCTC
TGCACAATCTGCTAGTACCAGGAGCTGAAGTGTCTCCTGAGTGA
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