mRNA_H-elongata_contig87887.16318.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Match: A0A835Z0Y6_9STRA (CTP synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Y6_9STRA) HSP 1 Score: 149 bits (377), Expect = 4.440e-40 Identity = 76/120 (63.33%), Postives = 89/120 (74.17%), Query Frame = 1
Query: 1 MGATMRLGQRKTILRHFANGEGLISARMCGNVDEVLERHRHRLRSTRKKIGAIEAVRFEFVGRDESDLRMVIAEIPRSRHPYYVGTQYHPEFLSRPLEPSPPFLGLILSASGQMDAWLSN 360
MG TMRLG R TIL ANGE +R+ GN D VLERHRHR + + IEA EFVGRD+S RM IAE+P S HPYYVGTQYHPEFLSRPLEPSPPFLGL+L+A ++DA+L++
Sbjct: 441 MGGTMRLGARSTILSARANGETSTVSRLYGNADSVLERHRHRYEVNPEMVADIEAAGLEFVGRDDSGKRMEIAELPSSVHPYYVGTQYHPEFLSRPLEPSPPFLGLVLAACNELDAYLAS 560
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Match: A0A7S2RDI6_9STRA (CTP synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RDI6_9STRA) HSP 1 Score: 134 bits (337), Expect = 1.720e-34 Identity = 70/126 (55.56%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 1 MGATMRLGQRKTILRHFANGEG---LISARMCGNVDEVLERHRHRLRSTRKKIGAIEAVRFEFVGRDESDLRMVIAEIPRSRHPYYVGTQYHPEFLSRPLEPSPPFLGLILSASGQMDAWLSNNGN 369
MG TMRLG R TIL+ NG +S+++ N V ERHRHR + + A+E VGRDE+ RM IAE+PRS HP+Y+G QYHPEF SRPLEPSPPFLGL+LSASGQ+DAW+++ G+
Sbjct: 410 MGGTMRLGARDTILQPPKNGPAGVPSLSSQLYQNKTRVSERHRHRYEVNPEVVAALEEGGLNLVGRDETATRMEIAELPRSVHPFYMGVQYHPEFKSRPLEPSPPFLGLLLSASGQLDAWIASQGS 535
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Match: A0A7S3XP32_HETAK (CTP synthase (glutamine hydrolyzing) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XP32_HETAK) HSP 1 Score: 127 bits (318), Expect = 2.110e-33 Identity = 63/121 (52.07%), Postives = 82/121 (67.77%), Query Frame = 1
Query: 1 MGATMRLGQRKTILRHFANGEGLISARMCGNVDEVLERHRHRLRSTRKKIGAIEAVRFEFVGRDESDLRMVIAEIPRSRHPYYVGTQYHPEFLSRPLEPSPPFLGLILSASGQMDAWLSNN 363
MG TMRLG R T L A G +++R+ + V ERHRHR +K+ A++ FVGRD+ + RM I E+PR RHP+Y+G QYHPE+ S PL PSPPF GL+L+ASGQ+DAWL+ N
Sbjct: 171 MGGTMRLGARWTALLPDAAGARSLASRLYKTEEGVWERHRHRYEVNPEKVAALQGAGLHFVGRDKHEERMEICELPRGRHPFYMGCQYHPEYQSHPLTPSPPFHGLVLAASGQLDAWLAAN 291
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Match: K0SW18_THAOC (CTP synthase (glutamine hydrolyzing) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SW18_THAOC) HSP 1 Score: 122 bits (305), Expect = 7.270e-33 Identity = 64/121 (52.89%), Postives = 78/121 (64.46%), Query Frame = 1
Query: 1 MGATMRLGQRKTILRH--FANGEGLISARMCGNVDEVLERHRHRLRSTRKKIGAIEAVRFEFVGRDESDLRMVIAEIPRSRHPYYVGTQYHPEFLSRPLEPSPPFLGLILSASGQMDAWLS 357
MG TMRLG R T H +G I+ M N V ERHRHR ++ AI +FVGRDE+ RM +AE+PRS+HPYYVG QYHPEF SRPL PSPPF GL+L+A G +D ++S
Sbjct: 40 MGGTMRLGSRNTAFTHPEHEDGSTSIAQVMYKNARVVSERHRHRYEVNPDRVDAIHEAGLKFVGRDETGTRMEVAELPRSKHPYYVGCQYHPEFKSRPLNPSPPFHGLLLAACGMLDDYVS 160
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Match: A0A6U3T142_9STRA (CTP synthase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A6U3T142_9STRA) HSP 1 Score: 127 bits (318), Expect = 4.620e-32 Identity = 66/123 (53.66%), Postives = 81/123 (65.85%), Query Frame = 1
Query: 1 MGATMRLGQRKTILRHFANGEGLISAR--MCGNVDEVLERHRHRLRSTRKKIGAIEAVRFEFVGRDESDLRMVIAEIPRSRHPYYVGTQYHPEFLSRPLEPSPPFLGLILSASGQMDAWLSNN 363
MG TMRLG R T H + +G +S M N V ERHRHR +++ AI +FVGRDE+ RM IAE+PRS+HPYYVG QYHPEF SRPL PSPPF GL+L+A G +D + SN+
Sbjct: 356 MGGTMRLGSRNTAFTHSKHDDGSLSIAQIMYKNASVVSERHRHRYEVNPERVDAIHDAGLKFVGRDETGTRMEIAELPRSKHPYYVGCQYHPEFKSRPLNPSPPFHGLLLAACGMIDDYASNS 478
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Match: A0A7S0AZG8_9STRA (CTP synthase (glutamine hydrolyzing) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AZG8_9STRA) HSP 1 Score: 118 bits (295), Expect = 8.420e-32 Identity = 62/117 (52.99%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 1 MGATMRLGQRKTILRHFANGEGLISARMCGN-VDEVLERHRHRLRSTRKKIGAIEAVRFEFVGRDESDLRMVIAEIPRSRHPYYVGTQYHPEFLSRPLEPSPPFLGLILSASGQMDA 348
MG TMRLG R T H + +A++ N D V ERHRHR ++ I + +FVGRD + RM +AE+PRS HPYYVG QYHPEF SRPL+PSPPF GLIL+A+G +DA
Sbjct: 1 MGGTMRLGARDTKFTHQHEDGSMSTAQILYNGADTVSERHRHRYEVNPDRVDEIHSAGLKFVGRDTTGTRMEVAELPRSEHPYYVGCQYHPEFKSRPLKPSPPFHGLILAATGLLDA 117
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Match: B5YN22_THAPS (CTP synthase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN22_THAPS) HSP 1 Score: 125 bits (313), Expect = 4.700e-31 Identity = 65/123 (52.85%), Postives = 82/123 (66.67%), Query Frame = 1
Query: 1 MGATMRLGQRKTILRHFANGEGL--ISARMCGNVDEVLERHRHRLRSTRKKIGAIEAVRFEFVGRDESDLRMVIAEIPRSRHPYYVGTQYHPEFLSRPLEPSPPFLGLILSASGQMDAWLSNN 363
MG TMRLG R T H + +G IS M G D V ERHRHR +++ I +FVGRDE+ RM IAE+PRS+HPYYVG QYHPEF SRPL PSPPF GL+L+A G +D +++++
Sbjct: 435 MGGTMRLGSRNTKFTHPTHDDGSPSISKIMYGGSDTVSERHRHRYEVNPERVDTIHEAGLKFVGRDETGTRMEIAELPRSQHPYYVGCQYHPEFKSRPLNPSPPFHGLLLAACGMLDDYVASH 557
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Match: D7G6L2_ECTSI (CTP synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L2_ECTSI) HSP 1 Score: 124 bits (310), Expect = 9.280e-31 Identity = 60/76 (78.95%), Postives = 67/76 (88.16%), Query Frame = 1
Query: 142 KKIGAIEAVRFEFVGRDESDLRMVIAEIPRSRHPYYVGTQYHPEFLSRPLEPSPPFLGLILSASGQMDAWLSNNGN 369
+KI IEA EFVGRDES LRM IAEIPRS+HPYYVGTQYHPEFLSRPLEPSPPFLGL+L++SGQMDAWL +G+
Sbjct: 433 EKIDEIEAGGLEFVGRDESGLRMEIAEIPRSKHPYYVGTQYHPEFLSRPLEPSPPFLGLLLASSGQMDAWLEGSGS 508
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Match: A0A0P5T681_9CRUS (CTP synthase (glutamine hydrolyzing) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5T681_9CRUS) HSP 1 Score: 121 bits (303), Expect = 1.970e-30 Identity = 62/120 (51.67%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 1 MGATMRLGQRKTILRHFANGEGLISARMCGNVDEVLERHRHRLRSTRKKIGAIEAVRFEFVGRDESDLRMVIAEIPRSRHPYYVGTQYHPEFLSRPLEPSPPFLGLILSASGQMDAWLSN 360
MG TMRLG+R TI +GE ++ ++ GNV + ERHRHR + + IE FVGRDES+ RM I E+P S HPY+V TQYHPE++SRPL+PSPP+LGL+L+A G++ +L+N
Sbjct: 219 MGGTMRLGKRTTIF----HGESILK-KLYGNVGSIDERHRHRYEVNPEFVDKIEKAGLHFVGRDESETRMEIMELPVSTHPYFVATQYHPEYISRPLKPSPPYLGLLLAAVGKLQPYLNN 333
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Match: B7GCP7_PHATC (CTP synthase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GCP7_PHATC) HSP 1 Score: 123 bits (308), Expect = 2.180e-30 Identity = 63/116 (54.31%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 1 MGATMRLGQRKTILRH-FANGEGLISARMCGNVDEVLERHRHRLRSTRKKIGAIEAVRFEFVGRDESDLRMVIAEIPRSRHPYYVGTQYHPEFLSRPLEPSPPFLGLILSASGQMD 345
MG TMRLG R T H A+G +S R+ G + V ERHRHR +K+ A+ FVGRDE+ RM IAE+P+S HPYY+G Q+HPEFLSRPL+PSPPF GLIL+A+G ++
Sbjct: 425 MGGTMRLGARTTKFTHTLADGSMSVSQRLYGGKEMVSERHRHRYEVNPEKVDAVHDGGLRFVGRDETGERMEIAELPQSEHPYYLGCQFHPEFLSRPLKPSPPFYGLILAATGMLE 540 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87887.16318.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87887.16318.1 >prot_H-elongata_contig87887.16318.1 ID=prot_H-elongata_contig87887.16318.1|Name=mRNA_H-elongata_contig87887.16318.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp MGATMRLGQRKTILRHFANGEGLISARMCGNVDEVLERHRHRLRSTRKKIback to top mRNA from alignment at H-elongata_contig87887:293..1401+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87887.16318.1 ID=mRNA_H-elongata_contig87887.16318.1|Name=mRNA_H-elongata_contig87887.16318.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1109bp|location=Sequence derived from alignment at H-elongata_contig87887:293..1401+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87887:293..1401+ >mRNA_H-elongata_contig87887.16318.1 ID=mRNA_H-elongata_contig87887.16318.1|Name=mRNA_H-elongata_contig87887.16318.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at H-elongata_contig87887:293..1401+ (Himanthalia elongata Himel1 dioecious)back to top |