mRNA_H-elongata_contig87874.16317.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Match: A0A6H5JZ79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ79_9PHAE) HSP 1 Score: 216 bits (549), Expect = 2.220e-64 Identity = 103/183 (56.28%), Postives = 137/183 (74.86%), Query Frame = 1
Query: 1 FFVRQKIITDKIDVIANELFYEIMVGPEAFELVPHTKVVLDTLAAWKEN-GGPKLAVVANADERLNVTLENMGILPYFDFVLTSHEAGFKVNEVGLYDRALEIAGVESPGDAIHFGSDYDLDVIGPCKAGWDACLVKPRQSDYEQPEEIYQYHRLMRIGEVLHRFGLPGADMPILSRRRGNFW 546
F++ + I+ DKID + +EL+YEI VGPEAFE++P KVVLD LAAW++N GGPKLAVVA+ D+RL+V LEN+G+LPYFDFVLTS E G++ E +Y+ ALE AGV+ +H G Y+ D+ G C+AG +A VK Q+ YE+P E Y++HR+ IGE+L+R GLP AD +SRRRGNFW
Sbjct: 326 FYMDEDIVLDKIDDLVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEIALETAGVKQAKKGLHVGCKYETDITGSCEAGMEAVSVKRCQTLYERPNEPYEFHRVYEIGELLNRLGLPQADEEYMSRRRGNFW 508
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Match: D8LIY6_ECTSI (Haloacid dehalogenase-like hydrolase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIY6_ECTSI) HSP 1 Score: 204 bits (520), Expect = 2.010e-61 Identity = 98/183 (53.55%), Postives = 133/183 (72.68%), Query Frame = 1
Query: 1 FFVRQKIITDKIDVIANELFYEIMVGPEAFELVPHTKVVLDTLAAWKEN-GGPKLAVVANADERLNVTLENMGILPYFDFVLTSHEAGFKVNEVGLYDRALEIAGVESPGDAIHFGSDYDLDVIGPCKAGWDACLVKPRQSDYEQPEEIYQYHRLMRIGEVLHRFGLPGADMPILSRRRGNFW 546
F++ + I+ DKID + +EL+YEI VGPEAFE++P KVVLD LAAW++N GGPKLAVVA+ D+RL+V LEN+G+LPYFDFVLTS E G++ E +Y+ ALE AGV+ +H G Y+ D+ G C+ G +A VK Q+ YE+P + Y++H + E+L+R GLP AD +SRRRGNFW
Sbjct: 192 FYMDEDIVLDKIDELVDELYYEITVGPEAFEVMPLVKVVLDRLAAWRDNEGGPKLAVVADDDDRLHVVLENLGLLPYFDFVLTSRETGYEPRETNMYEIALETAGVKRAKKGLHVGCKYETDITGSCETGMEAVSVKRFQTLYERPNDPYEFHPVYENRELLNRLGLPQADEEYMSRRRGNFW 374
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Match: W7TTJ7_9STRA (Haloacid dehalogenase-like hydrolase domain containing 3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTJ7_9STRA) HSP 1 Score: 103 bits (257), Expect = 7.410e-23 Identity = 54/144 (37.50%), Postives = 81/144 (56.25%), Query Frame = 1
Query: 49 NELFYEIMVGPEAFELVPHTKVVLDTLAAWKENGGPKLAVVANADERLNVTLENMGILPYFDFVLTSHEAGFKVNEVGLYDRALEIAGVESPGDAIHFGSDYDLDVIGPCKAGWDACLVKPRQSDYEQPEEIYQYHRLMRIGEV 480
EL+YE + A+E V ++D L W+ GGPKL V+ + DERL LEN+ IL YFD V++S E+G + + A+E AGV+ P +H G ++D DV+G AG D+ V DY +PE+ + +IG++
Sbjct: 213 EELYYESLTSEWAWETVDDVLPMMDKLQEWRMQGGPKLGVICDYDERLITILENLDILHYFDVVVSSRESGAGKPDPRPFLLAMEKAGVKDPKKVMHLGRNFDHDVVGAAAAGMDSMWVVMPSYDYLEPEQEARQVEFTKIGDL 356
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Match: A0A077WT55_9FUNG (Uncharacterized protein n=1 Tax=Lichtheimia ramosa TaxID=688394 RepID=A0A077WT55_9FUNG) HSP 1 Score: 85.5 bits (210), Expect = 2.680e-17 Identity = 60/181 (33.15%), Postives = 88/181 (48.62%), Query Frame = 1
Query: 7 VRQKIITDKIDVIANELFYEIMVGPEAFELVPHTKVVLDTLAAWKENGGPKLAVVANADERLNVTLENMGILPYFDFVLTSHEAGFKVNEVGLYDRALEIAGVESP---GDAIHFGSDYDLDVIGPCKAGWDACLVKPRQSDYEQPEEIYQYHRLMRIGEVLHRFGLPGADMPILSRRRGN 540
V +K + K +V+ N L YE + P V DTLA K+ G V++N+DERL L N+G+ PYFDFVL S+ AG++ E ++D+AL I +P A+H G D D G AGW+A L++ + YE + + G R + D+P+ GN
Sbjct: 32 VPKKELDPKFNVLFNSL-YERFTSDRGYSTFPD---VHDTLAYLKKQG-ISTGVISNSDERLLEVLHNLGLRPYFDFVLPSYRAGYEKPEKEIFDQALRIMHPRNPTRPDQALHVGDDLHTDYRGAINAGWNALLLERGKLSYEDTPAMQSDQNM--DGSTKPRSIMTLRDLPLQIHSFGN 205
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Match: A0A068RE34_9FUNG (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RE34_9FUNG) HSP 1 Score: 84.0 bits (206), Expect = 9.170e-16 Identity = 54/156 (34.62%), Postives = 80/156 (51.28%), Query Frame = 1
Query: 7 VRQKIITDKIDVIANELFYEIMVGPEAFELVPHTKVVLDTLAAWKENGGPKLAVVANADERLNVTLENMGILPYFDFVLTSHEAGFKVNEVGLYDRALEIA---GVESPGDAIHFGSDYDLDVIGPCKAGWDACLVKPRQSDYEQPEEIYQYHRLM 465
V +K + K +++ N L YE + P V DTL K+ G V++N+DERL+ L N+GI PYFDFVL S+ AG++ + ++D+AL I P A+H G D + D G AGW+A L++ + YE + LM
Sbjct: 88 VPKKELDPKFNLLFNSL-YERFTSDRGYSTFPD---VHDTLVYLKKQG-ISTGVISNSDERLSEVLHNLGIRPYFDFVLPSYRAGYEKPKKEIFDQALRIMHPYNPTRPDQALHVGDDLNADYKGALNAGWNALLLERGKLSYEDTPSMQSDQDLM 238
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Match: A0A419F624_9BACT (HAD family hydrolase n=1 Tax=Candidatus Abyssubacteria bacterium SURF_17 TaxID=2093361 RepID=A0A419F624_9BACT) HSP 1 Score: 73.2 bits (178), Expect = 2.030e-12 Identity = 53/160 (33.12%), Postives = 80/160 (50.00%), Query Frame = 1
Query: 4 FVRQKIITDKIDVIANELFYEIMVGPEAFELVPHTKVVLDTLAAWKENGGPKLAVVANADERLNVTLENMGILPYFDFVLTSHEAGFKVNEVGLYDRALEIAGVESPGDAIHFGSDYDLDVIGPCKAGWDACLVKPRQSDYEQPEEIY---QYHRLMRIG 474
F R I+ +K + I E+ Y P A+EL P T L+ L A LA+V+N + L ++ + + YFDFV++S EAG+K +++ ALE AG ++P +H G Y DV+G KAG ++ R + E I Q H L+ G
Sbjct: 86 FKRLGILEEKQEGIFAEI-YRFFSDPAAWELYPDTLESLEQLRA----SNLSLAIVSNWNSSLGKIVDGLKLADYFDFVISSAEAGWKKPSPRIFELALERAGADAP-RVVHIGDTYQTDVLGARKAGIRGIMLDRRGGTHHDHEVITCLTQLHSLLAHG 239
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Match: A0A7R9U3B9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3B9_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 4.590e-12 Identity = 45/133 (33.83%), Postives = 70/133 (52.63%), Query Frame = 1
Query: 37 DVIANELFYEIMV-GPEA--FELVPHTKVVLDTLAAWKENGGPKLAVVANADERLNVTLENMGILPYFDFVLTSHEAGFKVNEVGLYDRALEIAGVESPG-------DAIHFGSDYDLDVIGPCKAGWDACLV 405
+++ +L++ I GP +EL P + VL L + + GG +L V++N D+RL LE++GI YFDFVLTS EAG + ++D A G+ + G + +H G DV G AGW + +
Sbjct: 385 EMLFQDLYFNIFAKGPPEGMWELRPGVEAVLQNLRSAESCGGLRLGVLSNFDDRLPGILESLGIAKYFDFVLTSREAGQEKPSQVMFDLARNALGLSADGSGPIETRECLHAGDTLGTDVRGALDAGWQSAFI 517
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Match: A0A1S3K817_LINUN (uncharacterized protein LOC106179520 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K817_LINUN) HSP 1 Score: 73.6 bits (179), Expect = 6.200e-12 Identity = 48/129 (37.21%), Postives = 69/129 (53.49%), Query Frame = 1
Query: 25 TDKIDVIANELFYEIMVGPEAFELVPHTKVVLDTLAAWKENGGPKLAVVANADERLNVTLENMGILPYFDFVLTSHEAGFKVNEVGLYDRALEIAGVE--SPGDAIHFGSDYDLDVIGPCKAGWDACLV 405
TD + V + Y + E++E++P+T VL TL KE +L V++N D RL L + + YFDFV+TS EAG + AL++AG SP A+H G Y+ D K GW+ACL+
Sbjct: 89 TDPVLVDIADKLYRHFLTAESWEVLPNTVEVLTTL---KEKNY-QLGVISNFDSRLQAVLAALSLDQYFDFVVTSVEAGGSKPHPQPFQLALKLAGDTCLSPSHALHVGDSYEKDYQAARKLGWNACLI 213
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Match: F7DX60_CALJA (Haloacid dehalogenase-like hydrolase domain-containing protein 3 n=3 Tax=Cebidae TaxID=9498 RepID=F7DX60_CALJA) HSP 1 Score: 70.1 bits (170), Expect = 3.250e-11 Identity = 50/158 (31.65%), Postives = 78/158 (49.37%), Query Frame = 1
Query: 52 ELFYEIMVGPEAFELVPHTKVVLDTLAAWKENGGPKLAVVANADERLNVTLENMGILPYFDFVLTSHEAGFKVNEVGLYDRALEIAGVESPGDAIHFGSDYDLDVIGPCKAGWDACLVK-PRQSDYEQPEEIYQYHRLMRIGEVLHRFGLPGADMPIL 522
E YE P A++++ + DTL + G +LAV++N D RL L +G+ YFDFVLTS +AG+ + ++ +AL +A +E P H G +Y D GP G + LV P+ D + + + + H L + +L G P L
Sbjct: 99 EQLYEDFSSPCAWQVLDGAE---DTLRGCRTRG-LRLAVISNFDRRLEGILAGLGLREYFDFVLTSEDAGWPKPDPRIFQKALRLAHME-PAVTAHVGDNYLCDYQGPRAVGLHSFLVVGPQALDPKVRDSVPKEHILPTLAHLLPALDRLGGSTPGL 251
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Match: A0A6B2E710_9DIPT (Uncharacterized protein n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2E710_9DIPT) HSP 1 Score: 66.6 bits (161), Expect = 7.320e-10 Identity = 39/123 (31.71%), Postives = 64/123 (52.03%), Query Frame = 1
Query: 139 KENGGP-KLAVVANADERLNVTLENMGILPYFDFVLTSHEAGFKVNEVGLYDRALEIAGVES--PGDAIHFGSDYDLDVIGPCKAGWDACLVK---PRQSDYEQPEEIYQYHRLMRIGEVLHR 489
K G P K+ V++N D RL L NM + YFDFV++S+EAGF ++ +A+E A + P + +H G+ D +G + GW + L+ P++ + EI + H + E+ R
Sbjct: 141 KNEGAPFKIGVISNFDLRLETLLRNMKLFQYFDFVISSYEAGFTKPAPEIFIKAMEAAKFDDLQPDECLHIGNAPRNDYLGAKQVGWRSALIHEHPPKELQAKYGSEIDEKHVFPSLYELHKR 263 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87874.16317.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87874.16317.1 >prot_H-elongata_contig87874.16317.1 ID=prot_H-elongata_contig87874.16317.1|Name=mRNA_H-elongata_contig87874.16317.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=187bp FFVRQKIITDKIDVIANELFYEIMVGPEAFELVPHTKVVLDTLAAWKENGback to top mRNA from alignment at H-elongata_contig87874:615..2555- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87874.16317.1 ID=mRNA_H-elongata_contig87874.16317.1|Name=mRNA_H-elongata_contig87874.16317.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1941bp|location=Sequence derived from alignment at H-elongata_contig87874:615..2555- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87874:615..2555- >mRNA_H-elongata_contig87874.16317.1 ID=mRNA_H-elongata_contig87874.16317.1|Name=mRNA_H-elongata_contig87874.16317.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1122bp|location=Sequence derived from alignment at H-elongata_contig87874:615..2555- (Himanthalia elongata Himel1 dioecious)back to top |