mRNA_H-elongata_contig8780.16310.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8780.16310.1
Unique NamemRNA_H-elongata_contig8780.16310.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Match: D7FW35_ECTSI (Aldehyde Dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW35_ECTSI)

HSP 1 Score: 531 bits (1369), Expect = 7.990e-186
Identity = 262/347 (75.50%), Postives = 308/347 (88.76%), Query Frame = 1 
Query:    1 QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALARLWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKLLAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIAPNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVAGFVRDALEKGAESVVGGETLEHEMGPNFFPPSLLAGCTLDMRISTQEIFGPVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVGMVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVGGI 1041
            +PVGVCALLTPWNFPAAMFTRKAAPALMAGC+IV+KPAEDTPL  LALA LWE+AGGP+GV+NVV TPRELV+EVG+VLT    VRKISFTGSTAVGK LL Q+A T+K+TSMELGGNAPFVVFDDANL+LAV+GAM AKFRFGGQVCIAPNRF+VQ GI++ FV++M+E+IR LRVG+GLDSRTN+GPLINLAARDKVAG V+DA++KGA+ V GG+  +HEMG NFF P+LL GCTLDMRIS +EIFGPVV VMKF D DEAL + N    +RSGLAGY+Y+QD+SR +RFA  LEVGMVG+NE+SIS+ V+PFGGVKESG+GREGS +G++E+MEVK IC+GGI
Sbjct:  156 EPVGVCALLTPWNFPAAMFTRKAAPALMAGCTIVLKPAEDTPLTALALAWLWERAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKHLLKQAAGTVKKTSMELGGNAPFVVFDDANLELAVNGAMTAKFRFGGQVCIAPNRFLVQEGIYEAFVAKMAEQIRALRVGDGLDSRTNMGPLINLAARDKVAGLVKDAIDKGADVVCGGQLEQHEMGNNFFAPTLLGGCTLDMRISHEEIFGPVVAVMKFKDVDEALTISNS---SRSGLAGYVYTQDYSRGMRFAGKLEVGMVGMNESSISSCVVPFGGVKESGMGREGSVMGMDEFMEVKSICLGGI 499
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BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Match: X2KY60_SCYLO (Succinate semialdehyde dehydrogenase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=X2KY60_SCYLO)

HSP 1 Score: 524 bits (1349), Expect = 8.420e-183
Identity = 259/347 (74.64%), Postives = 306/347 (88.18%), Query Frame = 1 
Query:    1 QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALARLWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKLLAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIAPNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVAGFVRDALEKGAESVVGGETLEHEMGPNFFPPSLLAGCTLDMRISTQEIFGPVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVGMVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVGGI 1041
            +P+GVC+LLTPWNFPAAMF RKAAPA+MAGC+IV+KPAEDTPL  LALA LWEKAGGP+GV+NVV TPRELV+EVG+VLT    VRKISFTGSTAVGK+LL Q+A T+KRTSMELGGNAPFVVFDDA+LD AV+GAM AKFRFGGQVCIAPNRFM+Q GI++ FV++M+ERIRGLRVG+GL+  TN+GPLINLAAR+KVA  V DA++KGAE V GG  + HEMG NFF P+LL GCTLDMRIS +EIFGPVV  +KF DA+EALAM N    +RSGLAGY+Y+QD+SR +RFA  LEVGMVG+NE+SIS++V+PFGGVKESG+GREGS LG++E+MEVKHIC+GGI
Sbjct:  156 EPIGVCSLLTPWNFPAAMFARKAAPAIMAGCTIVLKPAEDTPLTALALAWLWEKAGGPKGVVNVVPTPRELVQEVGNVLTTDEAVRKISFTGSTAVGKQLLKQAASTVKRTSMELGGNAPFVVFDDADLDRAVNGAMAAKFRFGGQVCIAPNRFMIQEGIYEAFVAKMAERIRGLRVGDGLELSTNMGPLINLAAREKVASLVNDAVDKGAEVVCGG-AVGHEMGANFFAPTLLVGCTLDMRISHEEIFGPVVACVKFQDAEEALAMSNS---SRSGLAGYVYTQDYSRGMRFAGKLEVGMVGINESSISSSVVPFGGVKESGMGREGSELGMDEFMEVKHICLGGI 498
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BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Match: A0A835ZAJ4_9STRA (Succinate-semialdehyde dehydrogenase [NADP+] GabD n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAJ4_9STRA)

HSP 1 Score: 412 bits (1059), Expect = 6.330e-139
Identity = 209/346 (60.40%), Postives = 255/346 (73.70%), Query Frame = 1 
Query:    1 QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALARLWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKLLAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIAPNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVAGFVRDALEKGAESVVGGETLEH-EMGPNFFPPSLLAGCTLDMRISTQEIFGPVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVGMVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVG 1035
            Q +GVC+LLTPWNFPAAM TRKAAPAL AGC++V+KPAEDTPL  LALA L E+AG P GV+N+VTTPR  V  VG+ +  HPDV K+SFTGSTAVGK LL  +A  +K+ SMELGGNAPF+VFDDA+LD A DG M +KFRFGGQ C+  NR MVQ G+ + F  ++  R+  L+VG+ L S TN+GPLIN AA  KV G V+DAL KGA+++VGG+  E  E G  F  P LL  C + M + +QEIFGPVV +M F+  DEA+ + N       GLAGY YSQ+  R  R AE LEVGMVGVNET IS   IPFGGVKE+GLGREGS  G++++ME+KHIC+G
Sbjct:  148 QAIGVCSLLTPWNFPAAMITRKAAPALAAGCTVVIKPAEDTPLTALALAALAEQAGFPPGVINIVTTPRAEVASVGEAMCTHPDVAKVSFTGSTAVGKILLTHAAKGVKKVSMELGGNAPFIVFDDADLDKAADGLMASKFRFGGQTCVCTNRVMVQSGVMEAFTEKVRARVEALKVGDPLVSGTNLGPLINAAAVTKVRGMVKDALSKGAQALVGGDQGEDGEPGSCFVKPVLLGNCDMSMSVCSQEIFGPVVPLMSFETEDEAVRIAND---VPGGLAGYFYSQNVGRIFRVAERLEVGMVGVNETVISKETIPFGGVKEAGLGREGSVYGMDDFMELKHICLG 490
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BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Match: UPI00100BB686 (NAD-dependent succinate-semialdehyde dehydrogenase n=1 Tax=Halomonadaceae TaxID=28256 RepID=UPI00100BB686)

HSP 1 Score: 399 bits (1024), Expect = 9.670e-134
Identity = 206/347 (59.37%), Postives = 252/347 (72.62%), Query Frame = 1 
Query:    1 QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALARLWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKLLAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIAPNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVAGFVRDALEKGAESVVGGETLEHEMGPNFFPPSLLAGCTLDMRISTQEIFGPVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVGMVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVGGI 1041
            +P+GV A +TPWNFP AM TRK APAL AGC++V+KPAE TPL  LALARL E+AG P GV+NVVT        +G+VLT  P VRK+SFTGST VGK+LLAQ ADT+K+T++ELGGNAPF+VFDDA+LD AV+GA+ AKFR  GQ C+  NRF+VQ GIHD FV R++ R+R LRVG+GL+    IGPLIN AA DKV   V DAL KGA  V GGE   H +G NFF P++L   T +M ++ +E FGP+  V +FD  DEA+A+ N    T  GLA Y YS+D+ R     E LE GMVGVNE  IS  + PFGGVKESGLGREGS  GLEE+ E+K+ C+GG+
Sbjct:  144 EPIGVVAAITPWNFPLAMITRKCAPALAAGCTVVIKPAEATPLTALALARLAEQAGIPAGVINVVTASSPAA--IGEVLTTDPRVRKVSFTGSTPVGKRLLAQCADTVKKTALELGGNAPFIVFDDADLDAAVEGAIAAKFRNAGQTCVCTNRFLVQSGIHDAFVDRLTARVRELRVGSGLEDGVQIGPLINAAAVDKVQRHVDDALAKGARLVCGGEP--HPLGGNFFTPTVLVDATREMALADEETFGPLAPVFRFDSDDEAIALAND---TPFGLAAYFYSRDYRRIFHTLEALEYGMVGVNEGLISTELAPFGGVKESGLGREGSHHGLEEFTELKYACLGGL 483
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BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Match: A0A1D9GPP8_9GAMM (Succinate-semialdehyde dehydrogenase (NADP(+)) n=1 Tax=Marinobacter salinus TaxID=1874317 RepID=A0A1D9GPP8_9GAMM)

HSP 1 Score: 399 bits (1024), Expect = 1.140e-133
Identity = 204/347 (58.79%), Postives = 259/347 (74.64%), Query Frame = 1 
Query:    1 QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALARLWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKLLAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIAPNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVAGFVRDALEKGAESVVGGETLEHEMGPNFFPPSLLAGCTLDMRISTQEIFGPVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVGMVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVGGI 1041
            +PVGV A +TPWNFP AM TRK APA+ AGC++V+KPAE TPL  LALARL  +AG P GV++VVT    +   VG+VL+  P VRK+SFTGSTAVGKKLLAQ A T+K+T+MELGGNAPF+VFDDA+LD AV+GA+ +KFR  GQ C+  NRF+VQ G+++EFVS+++ ++ GL+VGNGLD   +IGPLIN  A DKV G V DA+ KGA    GG+   HE+GPNFF P++LA  T DM ++ +E FGP+  V +F  A+EA+AM N    T SGLA YLY+ D+ R     E LE GMVGVNE  IS  + PFGGVKESGLGREGS  GL+E+ E+K++C+GG+
Sbjct:  149 EPVGVVAAITPWNFPLAMITRKCAPAIAAGCTVVIKPAEATPLTALALARLALEAGVPAGVISVVTASSPVA--VGEVLSTDPLVRKLSFTGSTAVGKKLLAQCASTVKKTAMELGGNAPFIVFDDADLDAAVEGAIASKFRNAGQTCVCTNRFLVQDGVYEEFVSKLTAKVAGLKVGNGLDDGISIGPLINRGAIDKVRGHVEDAIGKGARVASGGQP--HELGPNFFTPTVLADVTPDMAVAGEETFGPLAPVFRFHTAEEAVAMAND---TPSGLAAYLYATDYRRIWHTLEALEYGMVGVNEGLISTELAPFGGVKESGLGREGSHHGLDEFTELKYVCLGGL 488
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BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Match: A0A2G1VE65_9GAMM (Succinate-semialdehyde dehydrogenase (NADP(+)) n=2 Tax=Marinobacter TaxID=2742 RepID=A0A2G1VE65_9GAMM)

HSP 1 Score: 398 bits (1022), Expect = 2.280e-133
Identity = 203/347 (58.50%), Postives = 259/347 (74.64%), Query Frame = 1 
Query:    1 QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALARLWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKLLAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIAPNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVAGFVRDALEKGAESVVGGETLEHEMGPNFFPPSLLAGCTLDMRISTQEIFGPVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVGMVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVGGI 1041
            +PVGV A +TPWNFP AM TRK APA+ AGC++V+KPAE TPL  LALARL  +AG P+GV+NVVT    +   VG+VL+  P VRK+SFTGSTAVGKKLLAQ A T+K+T+MELGGNAPF+VFDDA+LD AVDGA+ +KFR  GQ C+  NRF+VQ G++D F+ +++ R+  L+VGNGL+    +GPLIN +A DKV   V DA+ KGA    GG+   HE+GPNFF P++LA  T DM ++T+E FGP+  V +F  A+EA+AM N    T SGLA YLY+ D+ R     EGLE GMVGVNE  IS+ + PFGGVKESGLGREGS  GL+E+ E+K++C+GG+
Sbjct:  149 EPVGVVAAITPWNFPMAMITRKCAPAIAAGCTVVIKPAEATPLTALALARLALEAGVPKGVINVVTASEPVA--VGEVLSTDPRVRKLSFTGSTAVGKKLLAQCASTVKKTAMELGGNAPFIVFDDADLDAAVDGAIASKFRNAGQTCVCTNRFLVQDGVYDAFLEKLTTRVAELKVGNGLEDGIAVGPLINRSAIDKVQRHVDDAVAKGARVTGGGQP--HELGPNFFTPTVLADVTPDMAVATEETFGPLAPVFRFHTAEEAIAMAND---TPSGLAAYLYATDYRRIWHTLEGLEYGMVGVNEGLISSELAPFGGVKESGLGREGSHHGLDEFTELKYVCLGGL 488
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BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Match: A0A8J1XFA4_OWEFU (Succinate-semialdehyde dehydrogenase n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XFA4_OWEFU)

HSP 1 Score: 395 bits (1016), Expect = 2.460e-132
Identity = 197/347 (56.77%), Postives = 251/347 (72.33%), Query Frame = 1 
Query:    1 QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALARLWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKLLAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIAPNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVAGFVRDALEKGAESVVGGETLEHEMGPNFFPPSLLAGCTLDMRISTQEIFGPVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVGMVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVGGI 1041
            QPVGV  ++TPWNFP+AM TRKAA A+ AGC++V+KPAE+TP + LAL  L E+AG P GVLN+VT  R    +VG +L  HP V KISFTGSTA GK LL Q+A+ +KR SMELGGNAPF+VFD AN+D AV GAMG KFR  GQ C+  NR +VQ GIHD+FV +++  I GL++G+G  + T  GPLIN+ A DKV G V+DA+ KGA  V GG+    + G NFF P+LL G   DMR+S +E FGPV  ++KF+  +EA+ + N    + SGLAGY +SQD S+  R AE +EVGMVG+NE  +S    PFGGVKESG+GREGS  G++EY E+K++C GGI
Sbjct:  154 QPVGVATMITPWNFPSAMITRKAAAAIAAGCTVVVKPAEETPYSALALCELAEEAGLPAGVLNIVTCSRSNAPKVGKLLCEHPLVAKISFTGSTATGKILLKQAANGVKRVSMELGGNAPFIVFDSANVDAAVAGAMGCKFRVSGQTCVCANRILVQSGIHDKFVEKLAAAINGLKIGDGFQADTTQGPLININAVDKVEGHVKDAVSKGATVVTGGQ--RSDQGCNFFQPTLLTGVNTDMRVSKEETFGPVAPILKFNTEEEAVTIANS---STSGLAGYFFSQDMSQIWRVAEAMEVGMVGINEGIMSTVEAPFGGVKESGIGREGSRYGIDEYTEIKYLCFGGI 495
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BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Match: A0A2N7TNZ4_9GAMM (Succinate-semialdehyde dehydrogenase (NADP(+)) n=3 Tax=Halomonas TaxID=2745 RepID=A0A2N7TNZ4_9GAMM)

HSP 1 Score: 394 bits (1012), Expect = 5.380e-132
Identity = 201/347 (57.93%), Postives = 250/347 (72.05%), Query Frame = 1 
Query:    1 QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALARLWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKLLAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIAPNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVAGFVRDALEKGAESVVGGETLEHEMGPNFFPPSLLAGCTLDMRISTQEIFGPVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVGMVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVGGI 1041
            +P+GV A +TPWNFP AM TRK APAL AGC +V+KPAE TPL  LALARL E+AG P GVLNVVT  +    E+G+VLT  P VRKISFTGST VGKKLLAQ A T+K+ SMELGGNAPF+VFDDA+LD AV+GA+ +K+R  GQ C+  NR +VQ G++D F+ +++ R+  L+VGNGLD     GPLIN AA DKV   + DAL KG   V GGE   H +G  FF P+++A  T +MR++T+E FGP+  V +FD  DEA+AM N    T  GLA Y Y++D+ R     EGLE GMV VNE  +S  + PFGGVKESGLGREGS  GL+EY E+K++CVGG+
Sbjct:  139 EPIGVVAAITPWNFPLAMITRKCAPALAAGCPVVIKPAEATPLTALALARLAEQAGFPAGVLNVVTAAKPA--EIGEVLTSDPRVRKISFTGSTPVGKKLLAQCAGTVKKASMELGGNAPFIVFDDADLDAAVEGAVASKYRNSGQTCVCTNRLLVQAGVYDAFLEKLTRRVAELKVGNGLDDGVMQGPLINQAAVDKVQSHIADALAKGGRLVCGGEP--HSLGGTFFQPTVIADVTDEMRVATEETFGPLAPVFRFDTVDEAIAMANA---TEFGLAAYFYARDYRRIWHVMEGLEYGMVAVNEGILSTELAPFGGVKESGLGREGSRHGLDEYTELKYVCVGGL 478
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BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Match: A0A4R3HUZ4_PAULE (Succinate semialdehyde dehydrogenase n=1 Tax=Paucimonas lemoignei TaxID=29443 RepID=A0A4R3HUZ4_PAULE)

HSP 1 Score: 394 bits (1012), Expect = 6.530e-132
Identity = 198/347 (57.06%), Postives = 259/347 (74.64%), Query Frame = 1 
Query:    1 QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALARLWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKLLAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIAPNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVAGFVRDALEKGAESVVGGETLEHEMGPNFFPPSLLAGCTLDMRISTQEIFGPVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVGMVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVGGI 1041
            QPVGVCA +TPWNFP AM TRKAAPAL AGC++V+KPAE TPL+ LA+A L  +AG P GVLN+VTT R     VG  LT +P VRK+SFTGST VGK+L+AQ ADT+KR S+ELGGNAPF+VF+DA++D AV GA+ +K+R  GQ C+  NRF+VQ G++DEF  +++  +  + VG+GL++ T IGPLIN AA  KV G V DA+ KGA++V+GG   +H +G NF+ P++L G T +M ++ +EIFGPV  + +F   +EA+A+ N    TR GLA Y YS+D  R  R AE LE GMVG+NE  ISN V PFGGVKESG+GREGS  G++EY+ +K++C+GGI
Sbjct:  145 QPVGVCAAITPWNFPIAMITRKAAPALAAGCTMVVKPAEATPLSALAVAELGARAGIPAGVLNIVTTARPAA--VGGELTANPTVRKLSFTGSTPVGKRLMAQCADTVKRVSLELGGNAPFIVFNDADIDAAVKGAIASKYRNAGQTCVCVNRFIVQDGVYDEFAEKLAIAVAEMTVGDGLENGTVIGPLINQAAVTKVDGLVADAVGKGAKAVIGGA--QHALGGNFYAPTVLTGVTSEMAVAQEEIFGPVAPLFRFKTDEEAVALANN---TRYGLAAYFYSRDIGRVWRVAEQLEYGMVGINEGLISNEVAPFGGVKESGIGREGSHYGIDEYLSIKYMCMGGI 484
[Close]
BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Match: A0A5P9H8Z8_9GAMM (Glutarate-semialdehyde dehydrogenase DavD n=5 Tax=Halomonas TaxID=2745 RepID=A0A5P9H8Z8_9GAMM)

HSP 1 Score: 392 bits (1008), Expect = 2.390e-131
Identity = 201/347 (57.93%), Postives = 249/347 (71.76%), Query Frame = 1 
Query:    1 QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALARLWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKLLAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIAPNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVAGFVRDALEKGAESVVGGETLEHEMGPNFFPPSLLAGCTLDMRISTQEIFGPVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVGMVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVGGI 1041
            +P+GV A +TPWNFP AM TRK APAL AGC +V+KPAE TPL  LALARL E AG P GV+NVVT  R    E+G+VLT  P VRK+SFTGST VGK LLAQ A T+K+ SMELGGNAPF+VFDDA+LD AVDGA+ +KFR  GQ C+  NRF+VQ G++D F+ +++ R+  L+VGNGL+     GPLIN AA DKV   + DALE G   V GGE   H +G  FF P+L+A  T  M+++T+E FGP+  V +F D +EA+AM N    T  GLA Y Y++D+ R  R  EGLE GMV VNE  +S  + PFGGVKESGLGREGS  GL+EY E+K++CVGG+
Sbjct:  142 EPIGVMAAITPWNFPLAMITRKCAPALAAGCPVVIKPAEATPLTALALARLAEDAGFPAGVINVVTAARPA--EIGEVLTTDPRVRKVSFTGSTPVGKTLLAQCAGTVKKASMELGGNAPFIVFDDADLDAAVDGAIASKFRNAGQTCVCTNRFLVQDGVYDAFIEKLAARMAELKVGNGLEEGVLQGPLINAAAVDKVQSHISDALEHGGRLVCGGEP--HALGGTFFQPTLIADVTAAMKVATEETFGPLAPVFRFHDDEEAIAMANA---TEFGLAAYFYARDYQRIWRTMEGLEYGMVAVNEGLLSTELAPFGGVKESGLGREGSRHGLDEYTELKYVCVGGL 481
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8780.16310.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW35_ECTSI7.990e-18675.50Aldehyde Dehydrogenase n=2 Tax=Ectocarpus TaxID=28... [more]
X2KY60_SCYLO8.420e-18374.64Succinate semialdehyde dehydrogenase n=1 Tax=Scyto... [more]
A0A835ZAJ4_9STRA6.330e-13960.40Succinate-semialdehyde dehydrogenase [NADP+] GabD ... [more]
UPI00100BB6869.670e-13459.37NAD-dependent succinate-semialdehyde dehydrogenase... [more]
A0A1D9GPP8_9GAMM1.140e-13358.79Succinate-semialdehyde dehydrogenase (NADP(+)) n=1... [more]
A0A2G1VE65_9GAMM2.280e-13358.50Succinate-semialdehyde dehydrogenase (NADP(+)) n=2... [more]
A0A8J1XFA4_OWEFU2.460e-13256.77Succinate-semialdehyde dehydrogenase n=1 Tax=Oweni... [more]
A0A2N7TNZ4_9GAMM5.380e-13257.93Succinate-semialdehyde dehydrogenase (NADP(+)) n=3... [more]
A0A4R3HUZ4_PAULE6.530e-13257.06Succinate semialdehyde dehydrogenase n=1 Tax=Pauci... [more]
A0A5P9H8Z8_9GAMM2.390e-13157.93Glutarate-semialdehyde dehydrogenase DavD n=5 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8780contigH-elongata_contig8780:220..2351 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score534.3
Seed ortholog evalue4.4e-149
Seed eggNOG ortholog2880.D7FW35
Preferred nameALDH5A1
KEGG rclassRC00080
KEGG koko:K00135,ko:K00139
KEGG ReactionR00713,R00714,R02401
KEGG Pathwayko00250,ko00310,ko00350,ko00650,ko00760,ko01100,ko01120,map00250,map00310,map00350,map00650,map00760,map01100,map01120
KEGG ModuleM00027
GOsGO:0000166,GO:0001505,GO:0003674,GO:0003824,GO:0004777,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006083,GO:0006091,GO:0006105,GO:0006518,GO:0006520,GO:0006536,GO:0006538,GO:0006540,GO:0006541,GO:0006575,GO:0006629,GO:0006631,GO:0006643,GO:0006644,GO:0006650,GO:0006664,GO:0006665,GO:0006672,GO:0006677,GO:0006678,GO:0006681,GO:0006687,GO:0006749,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007275,GO:0007399,GO:0007417,GO:0008150,GO:0008152,GO:0009013,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009448,GO:0009450,GO:0009791,GO:0009987,GO:0015980,GO:0016043,GO:0016054,GO:0016491,GO:0016620,GO:0016903,GO:0016999,GO:0017144,GO:0019318,GO:0019374,GO:0019637,GO:0019752,GO:0022607,GO:0022900,GO:0022904,GO:0031406,GO:0031974,GO:0032501,GO:0032502,GO:0032787,GO:0033554,GO:0034599,GO:0034641,GO:0036094,GO:0042133,GO:0042135,GO:0042221,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043177,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043603,GO:0043648,GO:0043649,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045333,GO:0046395,GO:0046459,GO:0046486,GO:0046983,GO:0048037,GO:0048731,GO:0048856,GO:0050662,GO:0050896,GO:0051186,GO:0051259,GO:0051260,GO:0051262,GO:0051287,GO:0051289,GO:0051716,GO:0055114,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070887,GO:0071704,GO:0071840,GO:0072329,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1903509
EggNOG free text desc.succinate-semialdehyde dehydrogenase (NAD ) activity
EggNOG OGsCOG1012@1,KOG2451@2759
EC1.2.1.16,1.2.1.20,1.2.1.24,1.2.1.79
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAldehyde dehydrogenase
Ec32 orthologEc-01_003210.1
Exons5
Model size1044
Cds size1044
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8780.16310.1prot_H-elongata_contig8780.16310.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8780 220..2351 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931278.9212408-CDS-H-elongata_contig8780:219..3311622931278.9212408-CDS-H-elongata_contig8780:219..331Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8780 220..331 +
1691679771.0017717-CDS-H-elongata_contig8780:219..3311691679771.0017717-CDS-H-elongata_contig8780:219..331Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8780 220..331 +
1622931278.9723632-CDS-H-elongata_contig8780:541..7951622931278.9723632-CDS-H-elongata_contig8780:541..795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8780 542..795 +
1691679771.0140057-CDS-H-elongata_contig8780:541..7951691679771.0140057-CDS-H-elongata_contig8780:541..795Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8780 542..795 +
1622931279.00981-CDS-H-elongata_contig8780:1001..12291622931279.00981-CDS-H-elongata_contig8780:1001..1229Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8780 1002..1229 +
1691679771.0233593-CDS-H-elongata_contig8780:1001..12291691679771.0233593-CDS-H-elongata_contig8780:1001..1229Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8780 1002..1229 +
1622931279.0299714-CDS-H-elongata_contig8780:1439..16631622931279.0299714-CDS-H-elongata_contig8780:1439..1663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8780 1440..1663 +
1691679771.032864-CDS-H-elongata_contig8780:1439..16631691679771.032864-CDS-H-elongata_contig8780:1439..1663Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8780 1440..1663 +
1622931279.047581-CDS-H-elongata_contig8780:2125..23511622931279.047581-CDS-H-elongata_contig8780:2125..2351Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8780 2126..2351 +
1691679771.0424237-CDS-H-elongata_contig8780:2125..23511691679771.0424237-CDS-H-elongata_contig8780:2125..2351Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8780 2126..2351 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8780.16310.1

>prot_H-elongata_contig8780.16310.1 ID=prot_H-elongata_contig8780.16310.1|Name=mRNA_H-elongata_contig8780.16310.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=348bp
QPVGVCALLTPWNFPAAMFTRKAAPALMAGCSIVMKPAEDTPLATLALAR
LWEKAGGPRGVLNVVTTPRELVEEVGDVLTRHPDVRKISFTGSTAVGKKL
LAQSADTIKRTSMELGGNAPFVVFDDANLDLAVDGAMGAKFRFGGQVCIA
PNRFMVQRGIHDEFVSRMSERIRGLRVGNGLDSRTNIGPLINLAARDKVA
GFVRDALEKGAESVVGGETLEHEMGPNFFPPSLLAGCTLDMRISTQEIFG
PVVGVMKFDDADEALAMCNRRVLTRSGLAGYLYSQDFSRALRFAEGLEVG
MVGVNETSISNAVIPFGGVKESGLGREGSALGLEEYMEVKHICVGGI*
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mRNA from alignment at H-elongata_contig8780:220..2351+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8780.16310.1 ID=mRNA_H-elongata_contig8780.16310.1|Name=mRNA_H-elongata_contig8780.16310.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2132bp|location=Sequence derived from alignment at H-elongata_contig8780:220..2351+ (Himanthalia elongata Himel1 dioecious)
CAGCCTGTCGGAGTGTGCGCTCTCCTGACCCCTTGGAACTTCCCAGCGGC
AATGTTCACCCGTAAGGCGGCTCCAGCGTTGATGGCCGGATGCTCCATCG
TCATGAAGCCAGGTGTTGTTGGCCTTATAATTTACCCTTGAATGCATCCA
ACGCCATGCGAGAAGATTTTCCTGAAGCACTAACTGATGCATTTCCGCTG
TTAACCTTACCGGTAACATAATAATATCAAAACCGTTCTTCCGCTCTGCC
GATCGACGGCGCGAGTTTCAAATTCCGCTCGTATTTTTTTGCTGTTGTTG
CTACGCACCGAACGCTTTCCAGCTGAAGACACTCCCCTCGCCACGCTAGC
ATTGGCGCGGCTGTGGGAGAAGGCTGGTGGACCGCGCGGCGTGTTGAATG
TCGTGACTACACCGCGAGAGCTTGTGGAGGAGGTGGGCGACGTGCTCACT
CGTCACCCGGACGTTAGAAAGATATCGTTCACGGGATCGACCGCCGTGGG
GAAAAAACTGCTTGCACAGTCCGCGGACACGATCAAACGCACGTCCATGG
AGCTGGGGGGCAATGCACCCTTTGTGGTGAGTAAAATCCGCGTACAATAG
GGGATCTGGGTAGAGTTATAACGAGGCTTTTGCTTGTCAATGAGAGCAAG
CGTTCCGCAGATGCGGTATGTATACTATTTCATTTTCGTGATAACCCGCA
TTTCGTAAACGTCAAAGATGTCTCTGTTGTATCGAGAGAGCTTGTTAAAA
ATACGTTTTTCGTACGCCGACCTCCACTCCAGGTGTTCGACGACGCGAAT
CTGGATTTGGCAGTTGATGGGGCGATGGGGGCGAAATTTCGTTTTGGCGG
ACAAGTTTGCATAGCACCGAACCGGTTCATGGTGCAGCGAGGGATCCATG
ACGAGTTTGTCTCGAGAATGTCCGAACGGATCCGCGGCCTCCGAGTGGGG
AACGGACTCGACAGTCGCACCAACATAGGTCCACTCATAAACCTCGCTGC
AAGGGACAAAGTGAGAGCTTATTCTTCGCTTAGAAAAAGCCTTCCCCGAA
AAGCGACGCCGCCTTTTGTCCTCCGTTCGAACGTTTCACTTGGCATTTTG
TCCCTCTAGGGACATGAAGCGTTCAGCCTGCTCCGCATGTTTCCTGCTTG
TCTTGTGACCATCTCATCTTGCACGTGAAAACCCTCTCTGTTGGTGTATG
ATTTTCCTGAAATGTGTTAGGTGGCCGGGTTTGTGCGGGACGCGCTTGAG
AAGGGAGCGGAGTCAGTGGTTGGAGGGGAGACCCTCGAGCACGAGATGGG
TCCCAATTTTTTCCCACCGTCGCTGCTCGCCGGGTGCACGCTCGACATGC
GCATCAGCACCCAAGAAATCTTCGGTCCGGTGGTGGGCGTGATGAAGTTT
GACGACGCGGACGAGGCCCTCGCGATGTGTAACAGGCGAGTCTTGTGACG
CCTCGCGGCCTTTTCGCAGCGTGGTTTCCGCGCATGCTGTTGCGACAACA
GATACATCTTGTACACATACTACAACATGTAGACTGACTGGAGCTAGATG
TAGAGCTGGCATGGCTTGTCTCGGTGAAACGTGGCGAAGCGCTTACAGCT
AAGTCGTCACGAATGATGATGATATCATTCGCCGCGAGGGTAGTGTCGGG
CGTACGTCTTAACGGATACTTCACGTAGATATTATAAGGCGACGCTTCAG
CTGCGACATGCCCCAGGTTTCTCGTGACATACAGCACGCAGATACGATAT
TCTCTTTTCCAAGTCCATAACTCTATTATAATCATATTCTTCGCATGTAC
TGGTACTTCATTCAAATAAAATAAGCGTGTGGTTTTACTTCCAGATTCTT
CACTCAACGACAATCAAACCGTACGAACACCCACACCTTTACACCGGCTT
GTGCAGGACTCGAAGCGGATTGGCGGGTTACCTCTACAGCCAGGACTTTT
CCCGCGCCTTGCGATTCGCGGAGGGGCTTGAGGTTGGCATGGTAGGGGTC
AACGAGACCTCCATCTCAAACGCGGTGATTCCTTTCGGAGGCGTGAAGGA
ATCGGGTTTGGGCCGGGAGGGTTCGGCCTTGGGGCTCGAAGAGTACATGG
AAGTGAAGCACATCTGTGTTGGGGGTATCTAG
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Coding sequence (CDS) from alignment at H-elongata_contig8780:220..2351+

>mRNA_H-elongata_contig8780.16310.1 ID=mRNA_H-elongata_contig8780.16310.1|Name=mRNA_H-elongata_contig8780.16310.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2088bp|location=Sequence derived from alignment at H-elongata_contig8780:220..2351+ (Himanthalia elongata Himel1 dioecious)
CAGCCTGTCGGAGTGTGCGCTCTCCTGACCCCTTGGAACTTCCCAGCGGC
AATGTTCACCCGTAAGGCGGCTCCAGCGTTGATGGCCGGATGCTCCATCG
TCATGAAGCCAGCAGCCTGTCGGAGTGTGCGCTCTCCTGACCCCTTGGAA
CTTCCCAGCGGCAATGTTCACCCGTAAGGCGGCTCCAGCGTTGATGGCCG
GATGCTCCATCGTCATGAAGCCAGCTGAAGACACTCCCCTCGCCACGCTA
GCATTGGCGCGGCTGTGGGAGAAGGCTGGTGGACCGCGCGGCGTGTTGAA
TGTCGTGACTACACCGCGAGAGCTTGTGGAGGAGGTGGGCGACGTGCTCA
CTCGTCACCCGGACGTTAGAAAGATATCGTTCACGGGATCGACCGCCGTG
GGGAAAAAACTGCTTGCACAGTCCGCGGACACGATCAAACGCACGTCCAT
GGAGCTGGGGGGCAATGCACCCTTTGTGCTGAAGACACTCCCCTCGCCAC
GCTAGCATTGGCGCGGCTGTGGGAGAAGGCTGGTGGACCGCGCGGCGTGT
TGAATGTCGTGACTACACCGCGAGAGCTTGTGGAGGAGGTGGGCGACGTG
CTCACTCGTCACCCGGACGTTAGAAAGATATCGTTCACGGGATCGACCGC
CGTGGGGAAAAAACTGCTTGCACAGTCCGCGGACACGATCAAACGCACGT
CCATGGAGCTGGGGGGCAATGCACCCTTTGTGGTGTTCGACGACGCGAAT
CTGGATTTGGCAGTTGATGGGGCGATGGGGGCGAAATTTCGTTTTGGCGG
ACAAGTTTGCATAGCACCGAACCGGTTCATGGTGCAGCGAGGGATCCATG
ACGAGTTTGTCTCGAGAATGTCCGAACGGATCCGCGGCCTCCGAGTGGGG
AACGGACTCGACAGTCGCACCAACATAGGTCCACTCATAAACCTCGCTGC
AAGGGACAAAGTGTTCGACGACGCGAATCTGGATTTGGCAGTTGATGGGG
CGATGGGGGCGAAATTTCGTTTTGGCGGACAAGTTTGCATAGCACCGAAC
CGGTTCATGGTGCAGCGAGGGATCCATGACGAGTTTGTCTCGAGAATGTC
CGAACGGATCCGCGGCCTCCGAGTGGGGAACGGACTCGACAGTCGCACCA
ACATAGGTCCACTCATAAACCTCGCTGCAAGGGACAAAGTGGCCGGGTTT
GTGCGGGACGCGCTTGAGAAGGGAGCGGAGTCAGTGGTTGGAGGGGAGAC
CCTCGAGCACGAGATGGGTCCCAATTTTTTCCCACCGTCGCTGCTCGCCG
GGTGCACGCTCGACATGCGCATCAGCACCCAAGAAATCTTCGGTCCGGTG
GTGGGCGTGATGAAGTTTGACGACGCGGACGAGGCCCTCGCGATGTGTAA
CAGGCGAGTCTTGTGGCCGGGTTTGTGCGGGACGCGCTTGAGAAGGGAGC
GGAGTCAGTGGTTGGAGGGGAGACCCTCGAGCACGAGATGGGTCCCAATT
TTTTCCCACCGTCGCTGCTCGCCGGGTGCACGCTCGACATGCGCATCAGC
ACCCAAGAAATCTTCGGTCCGGTGGTGGGCGTGATGAAGTTTGACGACGC
GGACGAGGCCCTCGCGATGTGTAACAGGCGAGTCTTGACTCGAAGCGGAT
TGGCGGGTTACCTCTACAGCCAGGACTTTTCCCGCGCCTTGCGATTCGCG
GAGGGGCTTGAGGTTGGCATGGTAGGGGTCAACGAGACCTCCATCTCAAA
CGCGGTGATTCCTTTCGGAGGCGTGAAGGAATCGGGTTTGGGCCGGGAGG
GTTCGGCCTTGGGGCTCGAAGAGTACATGGAAGTGAAGCACATCTGTGTT
GGGGGTATCTAGGACTCGAAGCGGATTGGCGGGTTACCTCTACAGCCAGG
ACTTTTCCCGCGCCTTGCGATTCGCGGAGGGGCTTGAGGTTGGCATGGTA
GGGGTCAACGAGACCTCCATCTCAAACGCGGTGATTCCTTTCGGAGGCGT
GAAGGAATCGGGTTTGGGCCGGGAGGGTTCGGCCTTGGGGCTCGAAGAGT
ACATGGAAGTGAAGCACATCTGTGTTGGGGGTATCTAG
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