mRNA_H-elongata_contig8763.16297.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Match: D8LBC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBC4_ECTSI) HSP 1 Score: 186 bits (471), Expect = 4.200e-55 Identity = 106/157 (67.52%), Postives = 120/157 (76.43%), Query Frame = 1
Query: 382 RRRLGEPKRALHLLRRAADVGWNSSTSFENLEVTHLNACAVLSELGRHEEALEHARSAVFHAQECEEIGT---LSIDEPSGEERPEGSK-----SRCARLATLAVSYYNLAVELEYTHRYEASLCWYREAVKLACDPDMRNEELVKTFQRAYVGARK 828
+RRLGEPKRAL LRRAA++G S S E+LEVTHLNACAVLSELGRHEEALEHARSAV+H QE E GT ++ + +E S SR ARLATLAVSYYNLAVELEYTHRYEA L WY EAV+LA D D+ NEEL+KTFQR++ GARK
Sbjct: 25 QRRLGEPKRALRCLRRAAELGRRSCGS-EHLEVTHLNACAVLSELGRHEEALEHARSAVYHGQELEGAGTHAGVAAETGRNQEGRASSSAGVGGSRKARLATLAVSYYNLAVELEYTHRYEACLRWYGEAVQLARDQDVHNEELLKTFQRSFAGARK 180
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Match: A0A2P4XJ43_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4XJ43_9STRA) HSP 1 Score: 154 bits (388), Expect = 4.890e-41 Identity = 95/247 (38.46%), Postives = 153/247 (61.94%), Query Frame = 1
Query: 109 LKTRMFGPENSMTRRALKDTIVACNSLAMFALGRGDTSRCDELLVRALEMTSSAKWRDKDSDRASYGSERCASGGIPSLEILTFNNMACLHRRRLGEPKRALHLLRRAADVGWNSSTSFENLEVTHLNACAVLSELGRHEEALEHARSAVFHAQECEEIGTLSI----DEPSGEERPEGS---KSRCARLATLAVSYYNLAVELEYTHRYEASLCWYREAVKLACDPDMRNEELVKTFQRAYVGARK 828
LK RMFG +NS+ +AL + +++ NS+AM L +G +C +L +A +T+ ++ RC + L+ILTFNN+ C +R+ LG+ K AL L+ AA +G + S +NL +THLN CA+ S+LGRH+ ALEHA++A+FH QE E+ +L DE + + + + + +R ++ +LAV+Y+NLAVELE+ R EASL WY++A++L NE L ++F++ ++ A+K
Sbjct: 28 LKRRMFGVDNSVVHKALNEVMLSYNSMAMQYLAQGQFDQCLAMLRKAEAITAPGNFK------------RCQA-----LQILTFNNIGCCYRK-LGKLKSALKYLKEAAQIG-SGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE--ELVSLEDGGERDEDNSDNKDQDALDPTTREEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRETNEALCESFKKIFLDAKK 253
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Match: K3WL64_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL64_GLOUD) HSP 1 Score: 153 bits (386), Expect = 1.750e-40 Identity = 103/289 (35.64%), Postives = 165/289 (57.09%), Query Frame = 1
Query: 1 NDFEVLQLLEETLKKCSATGRRPSTAHVDLLERRAALKTRMFGPENSMTRRALKDTIVACNSLAMFALGRGDTSRCDELLVRALEMTSSAKWRDKDSDRASYGSERCASGGIPSLEILTFNNMACLHRRRLGEPKRALHLLRRAADVGWNSSTSFENLEVTHLNACAVLSELGRHEEALEHARSAVFHAQECEEIGTLSI----DEPSGEERPEGS---------KSRCARLATLAVSYYNLAVELEYTHRYEASLCWYREAVKLACDPDMRNEELVKTFQRAYVGARK 828
+D +L++L T+ + + LE+ LK RMFG +NS+ RRAL + +++ NS+AM L + +C +L +A +T+ ++ +C S L+ILTFNN+ C +R+ LG+ K AL L+ AA +G ++ +NL +THLN CA+ S+LGRH+ ALEHA++A+FH QE E+ ++ DE +E G+ KSR ++ +LAV+Y+NLAVELE+ R EASL WY++A++L N L +F++ ++ A+K
Sbjct: 3 SDQSLLEMLSSTV--ACLKQKNMDLEALGCLEQSLWLKRRMFGVDNSVVRRALHEVVLSYNSVAMQYLAQAQFDQCLAMLRKAEAITAPGNFK------------KCQS-----LQILTFNNIGCCYRK-LGKLKSALKYLKEAAQIG-STCAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE--ELVSMDAKGHQDERDEDEDYSGTGETTDLLDAKSREEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYKDTNSALCDSFKKIFMDAKK 268
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Match: A0A662XMZ8_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XMZ8_9STRA) HSP 1 Score: 157 bits (398), Expect = 6.120e-40 Identity = 99/263 (37.64%), Postives = 158/263 (60.08%), Query Frame = 1
Query: 91 LERRAALKTRMFGPENSMTRRALKDTIVACNSLAMFALGRGDTSRCDELLVRALEMTSSAKWRDKDSDRASYGSERCASGGIPSLEILTFNNMACLHRRRLGEPKRALHLLRRAADVGWNSSTSFENLEVTHLNACAVLSELGRHEEALEHARSAVFHAQECEEIGTLSIDEPSGEERPE-----------------GSKSRCARLATLAVSYYNLAVELEYTHRYEASLCWYREAVKLACDPDMRNEELVKTFQRAYVGARK 828
LE+ LK RMFG +NS+ RAL + +++ NS+AM L +G +C +L +A +T+ ++ +C + L+ILTFNN+ C +R+ L + K AL L+ AA +G +SS +NL +THLN CA+ S+LGRH+ ALEHA++A+FH QE +S+++ +G++R E +K+R ++ +LAV+Y+NLAVELE+ R EASL WY++A++L NE L ++F++ ++ ARK
Sbjct: 103 LEQSLWLKRRMFGVDNSVVHRALNEVMLSYNSVAMQYLSQGQFDQCLAMLRKAEAITAPGNFK------------KCQA-----LQILTFNNIGCCYRK-LSKLKSALKYLKEAAQLG-SSSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE----ELVSLEDRAGDDREEEAAESESGEQAGLMDALDAKTREEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRETNEALCESFKKIFLDARK 342
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Match: A0A662XH76_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XH76_9STRA) HSP 1 Score: 156 bits (395), Expect = 1.770e-39 Identity = 101/261 (38.70%), Postives = 157/261 (60.15%), Query Frame = 1
Query: 91 LERRAALKTRMFGPENSMTRRALKDTIVACNSLAMFALGRGDTSRCDELLVRALEMTSSAKWRDKDSDRASYGSERCASGGIPSLEILTFNNMACLHRRRLGEPKRALHLLRRAADVGWNSSTSFENLEVTHLNACAVLSELGRHEEALEHARSAVFHAQECEEIGTLS--IDEPSGEERPEG-------------SKSRCARLATLAVSYYNLAVELEYTHRYEASLCWYREAVKLACDPDMRNEELVKTFQRAYVGARK 828
LE+ LK RMFG +NS+ +AL + +++ NS+AM L +G +C +L +A +T+ +R +C + L+ILTFNN+ C +R+ LG+ K AL L+ AA +G + ST +NL +THLN CA+ S+LGRH+ ALEHA++A+FH QE E+ +L D+ EE E +K+R ++ +LAV+Y+NLAVELE+ R EASL WY++A++L NE L ++F++ ++ A+K
Sbjct: 712 LEQSLWLKRRMFGVDNSVVHKALNEVMLSYNSVAMQYLSQGQFDQCLAMLRKAEAVTAPGNFR------------KCQA-----LQILTFNNIGCCYRK-LGKLKSALKYLKEAAQLG-SGSTHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE--ELVSLEDRADDDREEEAAESEGGEQAGLMDALDAKTREEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRETNEALCESFKKIFLDAKK 951
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Match: G4Z6V2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z6V2_PHYSP) HSP 1 Score: 155 bits (392), Expect = 2.730e-39 Identity = 100/260 (38.46%), Postives = 156/260 (60.00%), Query Frame = 1
Query: 91 LERRAALKTRMFGPENSMTRRALKDTIVACNSLAMFALGRGDTSRCDELLVRALEMTSSAKWRDKDSDRASYGSERCASGGIPSLEILTFNNMACLHRRRLGEPKRALHLLRRAADVGWNSSTSFENLEVTHLNACAVLSELGRHEEALEHARSAVFHAQE----CEEIGTLSIDEPS---GEERPEGS-------KSRCARLATLAVSYYNLAVELEYTHRYEASLCWYREAVKLACDPDMRNEELVKTFQRAYVGARK 828
LE+ LK RMFG +NS+ +AL + +++ NS+AM L +G +C +L +A +T+ ++ RC + L+ILTFNN+ C +R+ LG+ K AL L+ AA +G + S +NL +THLN CA+ S+LGRH+ ALEHA++A+FH QE E+ DE G+ER + + K+R ++ +LAV+Y+NLAVELE+ R EASL WY++A++L NE L ++F++ ++ A+K
Sbjct: 22 LEQSLWLKRRMFGVDNSVVHKALNEVMLSYNSVAMQYLSQGQFDQCLAMLRKAEAITAPGNFK------------RCQA-----LQILTFNNIGCCYRK-LGKLKSALKYLKEAAQIG-SGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQEELVSLEDGAMNERDEDGKCDGDERDQTALVDALDPKTREEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRETNEALCESFKKIFLDAKK 262
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Match: A0A6A4G548_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G548_9STRA) HSP 1 Score: 146 bits (369), Expect = 3.370e-39 Identity = 96/247 (38.87%), Postives = 147/247 (59.51%), Query Frame = 1
Query: 91 LERRAALKTRMFGPENSMTRRALKDTIVACNSLAMFALGRGDTSRCDELLVRALEMTSSAKWRDKDSDRASYGSERCASGGIPSLEILTFNNMACLHRRRLGEPKRALHLLRRAADVGWNSSTSFENLEVTHLNACAVLSELGRHEEALEHARSAVFHAQE---CEEIGTLSIDEPSGE----ERPEGS-------KSRCARLATLAVSYYNLAVELEYTHRYEASLCWYREAVKLACDPDMRNEEL 789
LE+ LK RMFG +NS+ +AL + +++ NS+AM L +G +C +L +A +T+ ++ RC + L+ILTFNN+ C +R+ LG+ K AL L+ AA +G + S +NL +THLN CA+ S+LGRH+ ALEHA++A+FH QE E G ++ + GE +R + + K+R ++ +LAV+Y+NLAVELE+ R EASL WY++A++L NE L
Sbjct: 22 LEQSLWLKRRMFGVDNSVVHKALNEVMLSYNSVAMQYLAQGQFDQCLAMLRKAEAITAPGNFK------------RCQA-----LQILTFNNIGCCYRK-LGKLKSALKYLKEAAQIG-SGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQEELVSLEDGAMNERDEDGECDGDDRDQAALVDALDPKTREEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRETNEAL 249
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Match: A0A6A3ZRF6_9STRA (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZRF6_9STRA) HSP 1 Score: 155 bits (392), Expect = 4.050e-39 Identity = 99/260 (38.08%), Postives = 156/260 (60.00%), Query Frame = 1
Query: 91 LERRAALKTRMFGPENSMTRRALKDTIVACNSLAMFALGRGDTSRCDELLVRALEMTSSAKWRDKDSDRASYGSERCASGGIPSLEILTFNNMACLHRRRLGEPKRALHLLRRAADVGWNSSTSFENLEVTHLNACAVLSELGRHEEALEHARSAVFHAQE----CEEIGTLSIDEPS---GEERPEGS-------KSRCARLATLAVSYYNLAVELEYTHRYEASLCWYREAVKLACDPDMRNEELVKTFQRAYVGARK 828
LE+ LK RMFG +NS+ +AL + +++ NS+AM L +G +C +L +A +T+ ++ RC + L+ILTFNN+ C +R+ LG+ K AL L+ AA +G + S +NL +THLN CA+ S+LGRH+ ALEHA++A+FH QE E+ DE G++R + + K+R ++ +LAV+Y+NLAVELE+ R EASL WY++A++L NE L ++F++ ++ A+K
Sbjct: 22 LEQSLWLKRRMFGVDNSVVHKALNEVMLSYNSVAMQYLAQGQFDQCLAMLRKAEAITAPGNFK------------RCQA-----LQILTFNNIGCCYRK-LGKLKSALKYLKEAAQIG-SGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQEELVSLEDEAMNERDEDGECDGDDRDQAALVDALDPKTREEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRETNEALCESFKKIFLDAKK 262
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Match: A0A0W8CMP5_PHYNI (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CMP5_PHYNI) HSP 1 Score: 154 bits (390), Expect = 4.350e-39 Identity = 100/279 (35.84%), Postives = 165/279 (59.14%), Query Frame = 1
Query: 1 NDFEVLQLLEETLKKCSATGRRPSTAHVDLLERRAALKTRMFGPENSMTRRALKDTIVACNSLAMFALGRGDTSRCDELLVRALEMTSSAKWRDKDSDRASYGSERCASGGIPSLEILTFNNMACLHRRRLGEPKRALHLLRRAADVGWNSSTSFENLEVTHLNACAVLSELGRHEEALEHARSAVFHAQECEEIGTL---SIDEPSGEERPEGSKSRCARLATLAVSYYNLAVELEYTHRYEASLCWYREAVKLACDPDMRNEELVKTFQRAYVGARK 828
+D +L++L T+ ++ + LE+ LK RMFG ++S +AL + +++ NS+AM L +G +C +L +A + + ++ RC + L+ILTFNN+ C +R+ LG+ K AL L+ AA +G + S +NL +THLN CA+ S+LGRH+ ALEHA++A+FH QE E+ +L + DE ++ K+R ++ +LAV+Y+NLAVELE+ R EASL WY++A++L NE L ++F++ ++ A+K
Sbjct: 53 SDQSLLEMLNSTV--ACLKQKKMDLEALGCLEQSLWLKRRMFGVDSSAVYKALNEVMLSYNSVAMQYLAQGQFDQCLAMLRKAEAIVAPGNFK------------RCQA-----LQILTFNNIGCCYRK-LGKLKSALKYLKEAAQIG-SGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE--ELVSLEDGARDEDDRDQDALDPKTREEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYKETNEALCESFKKIFLDAKK 308
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Match: A0A8J5IVD3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5IVD3_9STRA) HSP 1 Score: 153 bits (387), Expect = 5.350e-39 Identity = 96/248 (38.71%), Postives = 152/248 (61.29%), Query Frame = 1
Query: 91 LERRAALKTRMFGPENSMTRRALKDTIVACNSLAMFALGRGDTSRCDELLVRALEMTSSAKWRDKDSDRASYGSERCASGGIPSLEILTFNNMACLHRRRLGEPKRALHLLRRAADVGWNSSTSFENLEVTHLNACAVLSELGRHEEALEHARSAVFHAQECEEIGTL--SIDEPSGEERPEGSKSRCARLATLAVSYYNLAVELEYTHRYEASLCWYREAVKLACDPDMRNEELVKTFQRAYVGARK 828
LE+ LK RMFG ++S +AL + +++ NS+AM L +G +C +L +A + + ++ RC + L+ILTFNN+ C +R+ LG+ K AL L+ AA +G + S +NL +THLN CA+ S+LGRH+ ALEHA++A+FH QE E +G + DE ++ K+R ++ +LAV+Y+NLAVELE+ R EASL WY++A++L NE L ++F++ ++ A+K
Sbjct: 74 LEQSLWLKRRMFGVDSSAVLKALNEVMLSYNSVAMQYLAQGQFDQCLAMLRKAEAIVAPGNFK------------RCQA-----LQILTFNNIGCCYRK-LGKLKSALKYLKEAAQIG-SGSAHVKNLSITHLNLCAIQSQLGRHDLALEHAQAAIFHTQE-ELVGLEDGARDEDDSDQDALDPKTREEKIISLAVAYHNLAVELEFNGRGEASLQWYKKALQLVWKYRESNEALCESFKKIFLDAKK 301 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8763.16297.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8763.16297.1 >prot_H-elongata_contig8763.16297.1 ID=prot_H-elongata_contig8763.16297.1|Name=mRNA_H-elongata_contig8763.16297.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=276bp NDFEVLQLLEETLKKCSATGRRPSTAHVDLLERRAALKTRMFGPENSMTRback to top mRNA from alignment at H-elongata_contig8763:1631..4321+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8763.16297.1 ID=mRNA_H-elongata_contig8763.16297.1|Name=mRNA_H-elongata_contig8763.16297.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2691bp|location=Sequence derived from alignment at H-elongata_contig8763:1631..4321+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8763:1631..4321+ >mRNA_H-elongata_contig8763.16297.1 ID=mRNA_H-elongata_contig8763.16297.1|Name=mRNA_H-elongata_contig8763.16297.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1656bp|location=Sequence derived from alignment at H-elongata_contig8763:1631..4321+ (Himanthalia elongata Himel1 dioecious)back to top |