mRNA_H-elongata_contig87478.16284.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 191 bits (485), Expect = 7.380e-57 Identity = 105/234 (44.87%), Postives = 139/234 (59.40%), Query Frame = 1
Query: 1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTE---TVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSLF 693
R G+KE++++PHVF RPEFLMI+GVY+ TY AN + TTCE +VD WP+F+ TS VN+ SC+AKD FTRMF + P +P ST T+R T+ +F+ G + +++L QG S Q+ACPAA+Q STPL+L+G+DLYNNP S+A R F+ S+YTSS+ R+ R GPAFGIGGVGNTAFRK + F
Sbjct: 77 RAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMALPLSTYALFTIRD------AGTVGASFNL------------PGPV--SEWLQAQGMSKARADFTA-------------QMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARF 277
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A261XX22_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XX22_9FUNG) HSP 1 Score: 147 bits (372), Expect = 1.690e-40 Identity = 92/228 (40.35%), Postives = 115/228 (50.44%), Query Frame = 1
Query: 1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGR---LQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 675
++G + + LKPH F + +FL I+GVY TYVAAN I TTCE ++D T PKF GT+ N+A C+ KD FTRMF TV P + + + V +FN L Y+ H NI S KH QL CPA +Q STPL+LLG+DLYN N R I EY S + R++R GPAFGIGGVGNT R
Sbjct: 25 KQGFRTLFLKPHRFLASRQFLYIFGVYFGTYVAANTIDTTCEYAEMDSTGPKFFGTTATNMALCILKDRAFTRMFGTVASHSFPLPSYALFAARDSLTV-AASFNAPQLVSHYLQKH-----NI--------------------------STKHTADIVAQLGCPALVQFVSTPLHLLGLDLYNRSNMKLSDRAGLIRREYLKSTLARIARIGPAFGIGGVGNTLLRS 220
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 143 bits (360), Expect = 2.410e-38 Identity = 88/233 (37.77%), Postives = 119/233 (51.07%), Query Frame = 1
Query: 7 GVKEM----ILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSLF 693
G+K++ + P F + EFL+I+G+Y+ TYV+AN I T CE + D+ PKFIGT+ VN++ C+AKD F RMF + P P ++ + + V +FN K + A + PS QL CPAA+Q STPL+LLG+DLYNN SA R F+ EY S+ R+ R GPAFGIGGVGNT FR + F
Sbjct: 58 GLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLASIGLFAVRDSLTV-AASFNAPKFLAKKLEDDAKMQ----------------------------PSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTF 261
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: H6S466_PLAVT (Uncharacterized protein (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S466_PLAVT) HSP 1 Score: 141 bits (355), Expect = 6.410e-38 Identity = 83/225 (36.89%), Postives = 115/225 (51.11%), Query Frame = 1
Query: 1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIP-ASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFR 672
RE E + P F + EF +I+G+YA TY +AN++ + CE T+ D+ PKFIGT+ VN++ C+AKD F RMF + P P AS R + C + N ++ ++ N++ T Q+ CPAA+Q STPL+LLG+DLYNN N S R I E+ S++ R+ R GPAFGIGGVGN FR
Sbjct: 32 RELSVECLKHPLRFIGKREFHLIFGLYAATYASANIVDSVCEYTETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIVPGSFPLASIGLFAMRDSLTCAASFN-------APHVLAEKLQDNNLMKLSSATTFA-----------------------QVLCPAAVQFVSTPLHLLGLDLYNNKNQSVAQRVALIQREFGKSLLARIGRIGPAFGIGGVGNAYFR 226
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD) HSP 1 Score: 142 bits (357), Expect = 6.930e-38 Identity = 86/238 (36.13%), Postives = 119/238 (50.00%), Query Frame = 1
Query: 7 GVKEM----ILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPL-----PSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSLF 693
G+KE+ + P F + EF++++G+Y TY +AN I T CE + D+ PKF+GT+ VN+ C+AKD F +MF V P P I A R+ +T G+S +P + + PS QL CPAA+Q STPL+LLG+DLYNN +S AR +F+ EY S + R+ R GPAFGIGGVGNT R+ + F
Sbjct: 59 GIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSAFPIGA--------------------------IGLFAIRDS--------LTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENLRATF 262
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: H3GH37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH37_PHYRM) HSP 1 Score: 141 bits (355), Expect = 1.340e-37 Identity = 86/226 (38.05%), Postives = 116/226 (51.33%), Query Frame = 1
Query: 1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIP-ASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 675
RE + + P F + EF +I+G+Y TY+AAN+ T CE ++D+ PKFI T+ VN++ C+AKD F RMF + P P S R M C +FN + K I E + G++ + QL CPAA+QL STPL+LLG+DLYNN + R F+ EY S++ R+ R GPAFGIGGVGNT FR
Sbjct: 60 RELSADFVRHPLRFVGKREFHLIFGLYTATYMAANVTDTACEYAEMDNQMPKFISTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTC--GASFNAPKVLAKKIEDKGLMEKS----------GAATFA------------------QLVCPAAVQLLSTPLHLLGLDLYNNQGHAVAKRVSFVKREYVKSVLARIGRIGPAFGIGGVGNTYFRN 255
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG) HSP 1 Score: 142 bits (357), Expect = 2.400e-37 Identity = 81/224 (36.16%), Postives = 123/224 (54.91%), Query Frame = 1
Query: 1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFR 672
R+G++ ++++PH F P+F +I G+Y TY+ AN + TTCE + + + PKF+ T++VN++ C+ KD FTRMF RP+P +T + + T+ +F+ +V T + Y + + + + QLACPAA+Q STP++LLG+DLYN P SA R + EY S I R++R GPAFGIGG+GN FR
Sbjct: 85 RQGLQHLVIRPHRFVVTPQFRLILGLYFSTYLTANAVTTTCEHLERNASAPKFVSTTLVNMSFCIYKDRAFTRMFGLTAARPLPLATYGLFASRDAL---TVAASFNAPEVVSATL-------LRYGAVWDKRSADVVA------------------QLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: G4ZUB7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZUB7_PHYSP) HSP 1 Score: 139 bits (351), Expect = 5.570e-37 Identity = 88/229 (38.43%), Postives = 117/229 (51.09%), Query Frame = 1
Query: 7 GVKEMILK----PHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIP-ASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFRE-GNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 675
G+KE+ ++ P F + EF +I+G+Y TYV AN++ + CE + D+ PKFIGT+ VN++ C+AKD F RMF + P P S R M C +FN + K I + E GN S+ QL CPAA+Q STPL+L+G+DLYNN + R F+ EY S+ RV R GPAFGIGGVGNT FR
Sbjct: 60 GLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAEADNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTC--GASFNAPKVLAKKIEDNGLMEKGN----------ASTFA-------------------QLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFRN 257
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A397V437_9GLOM (Uncharacterized protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397V437_9GLOM) HSP 1 Score: 138 bits (348), Expect = 1.810e-36 Identity = 78/230 (33.91%), Postives = 116/230 (50.43%), Query Frame = 1
Query: 1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSL 690
+ G E+ +PH F P FL+++GVY TY AAN+I T C T D+ PKF+GT++ N+ +C+ KD FTRMF V P+ +P T + + + +FN + + +T I DY +Q + Q+ CPA +Q+ S L+L G+DLYN P S +R + Y + I R++R GPAFGIGGVGN ++ + L
Sbjct: 54 KRGFVELFTRPHRFVCTPAFLLVFGVYFTTYTAANVIDTVCSYTNRDNQTPKFLGTTIANMTTCIYKDRAFTRMFGIVAPKSLPLGTYGLFATRDALTI-AASFNLPSVMARELTDRK------IIVDYEKSQNFA---------------------QMLCPAGIQIISCALHLYGLDLYNRPGVSLSSRLSLLKKNYLKTTITRIARIGPAFGIGGVGNRVIKERVSEL 255
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A0L0FIC5_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FIC5_9EUKA) HSP 1 Score: 137 bits (346), Expect = 3.420e-36 Identity = 83/223 (37.22%), Postives = 117/223 (52.47%), Query Frame = 1
Query: 7 GVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 675
GVK++ P F +F +IWG+Y TYV AN++ T E + D PKF+ T+ VN + C+AKD FTRMF T+ P +P + + M TI +FS L VK H ++++Y + +L + LL CP A+QL STP++LLG+DLYNN ++ R F+ EY S R+SR PAFGIGG+ N FR+
Sbjct: 68 GVKQLTFTPTSFIRGLDFRLIWGLYTATYVVANVVDTVSELNKKDSAMPKFVVTTAVNGSLCIAKDRAFTRMFGTIAPTSLPIGSYGLFAVRDMA---TIGASFS-LPVKVADH--------MHDEYGYDRKRALFAAQLL-----------------CPMAVQLVSTPMHLLGLDLYNNKTATTSQRASFVGREYLKSTAARISRIAPAFGIGGISNRHFRE 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87478.16284.1 >prot_H-elongata_contig87478.16284.1 ID=prot_H-elongata_contig87478.16284.1|Name=mRNA_H-elongata_contig87478.16284.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=228bp MILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTback to top mRNA from alignment at H-elongata_contig87478:1243..2696- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87478.16284.1 ID=mRNA_H-elongata_contig87478.16284.1|Name=mRNA_H-elongata_contig87478.16284.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1454bp|location=Sequence derived from alignment at H-elongata_contig87478:1243..2696- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87478:1243..2696- >mRNA_H-elongata_contig87478.16284.1 ID=mRNA_H-elongata_contig87478.16284.1|Name=mRNA_H-elongata_contig87478.16284.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1368bp|location=Sequence derived from alignment at H-elongata_contig87478:1243..2696- (Himanthalia elongata Himel1 dioecious)back to top |