mRNA_H-elongata_contig87478.16284.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig87478.16284.1
Unique NamemRNA_H-elongata_contig87478.16284.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA)

HSP 1 Score: 191 bits (485), Expect = 7.380e-57
Identity = 105/234 (44.87%), Postives = 139/234 (59.40%), Query Frame = 1
Query:    1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTE---TVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSLF 693
            R G+KE++++PHVF  RPEFLMI+GVY+ TY  AN + TTCE  +VD  WP+F+ TS VN+ SC+AKD  FTRMF +  P  +P ST    T+R         T+  +F+              G +  +++L  QG S                     Q+ACPAA+Q  STPL+L+G+DLYNNP S+A  R  F+ S+YTSS+  R+ R GPAFGIGGVGNTAFRK   + F
Sbjct:   77 RAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMALPLSTYALFTIRD------AGTVGASFNL------------PGPV--SEWLQAQGMSKARADFTA-------------QMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARF 277          
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A261XX22_9FUNG (Uncharacterized protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261XX22_9FUNG)

HSP 1 Score: 147 bits (372), Expect = 1.690e-40
Identity = 92/228 (40.35%), Postives = 115/228 (50.44%), Query Frame = 1
Query:    1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGR---LQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 675
            ++G + + LKPH F +  +FL I+GVY  TYVAAN I TTCE  ++D T PKF GT+  N+A C+ KD  FTRMF TV     P  +  +      + V   +FN   L   Y+  H     NI                          S KH      QL CPA +Q  STPL+LLG+DLYN  N     R   I  EY  S + R++R GPAFGIGGVGNT  R 
Sbjct:   25 KQGFRTLFLKPHRFLASRQFLYIFGVYFGTYVAANTIDTTCEYAEMDSTGPKFFGTTATNMALCILKDRAFTRMFGTVASHSFPLPSYALFAARDSLTV-AASFNAPQLVSHYLQKH-----NI--------------------------STKHTADIVAQLGCPALVQFVSTPLHLLGLDLYNRSNMKLSDRAGLIRREYLKSTLARIARIGPAFGIGGVGNTLLRS 220          
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA)

HSP 1 Score: 143 bits (360), Expect = 2.410e-38
Identity = 88/233 (37.77%), Postives = 119/233 (51.07%), Query Frame = 1
Query:    7 GVKEM----ILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSLF 693
            G+K++    +  P  F  + EFL+I+G+Y+ TYV+AN I T CE  + D+  PKFIGT+ VN++ C+AKD  F RMF  + P   P ++  +      + V   +FN      K +   A  +                            PS      QL CPAA+Q  STPL+LLG+DLYNN   SA  R  F+  EY  S+  R+ R GPAFGIGGVGNT FR    + F
Sbjct:   58 GLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLASIGLFAVRDSLTV-AASFNAPKFLAKKLEDDAKMQ----------------------------PSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTF 261          
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: H6S466_PLAVT (Uncharacterized protein (Fragment) n=1 Tax=Plasmopara viticola TaxID=143451 RepID=H6S466_PLAVT)

HSP 1 Score: 141 bits (355), Expect = 6.410e-38
Identity = 83/225 (36.89%), Postives = 115/225 (51.11%), Query Frame = 1
Query:    1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIP-ASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFR 672
            RE   E +  P  F  + EF +I+G+YA TY +AN++ + CE T+ D+  PKFIGT+ VN++ C+AKD  F RMF  + P   P AS      R  + C  + N         ++     ++ N++      T                         Q+ CPAA+Q  STPL+LLG+DLYNN N S   R   I  E+  S++ R+ R GPAFGIGGVGN  FR
Sbjct:   32 RELSVECLKHPLRFIGKREFHLIFGLYAATYASANIVDSVCEYTETDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIVPGSFPLASIGLFAMRDSLTCAASFN-------APHVLAEKLQDNNLMKLSSATTFA-----------------------QVLCPAAVQFVSTPLHLLGLDLYNNKNQSVAQRVALIQREFGKSLLARIGRIGPAFGIGGVGNAYFR 226          
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD)

HSP 1 Score: 142 bits (357), Expect = 6.930e-38
Identity = 86/238 (36.13%), Postives = 119/238 (50.00%), Query Frame = 1
Query:    7 GVKEM----ILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPL-----PSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSLF 693
            G+KE+    +  P  F  + EF++++G+Y  TY +AN I T CE  + D+  PKF+GT+ VN+  C+AKD  F +MF  V P   P                             I   A R+         +T G+S  +P  +     +     PS      QL CPAA+Q  STPL+LLG+DLYNN  +S  AR +F+  EY  S + R+ R GPAFGIGGVGNT  R+   + F
Sbjct:   59 GIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSAFPIGA--------------------------IGLFAIRDS--------LTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENLRATF 262          
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: H3GH37_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GH37_PHYRM)

HSP 1 Score: 141 bits (355), Expect = 1.340e-37
Identity = 86/226 (38.05%), Postives = 116/226 (51.33%), Query Frame = 1
Query:    1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIP-ASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 675
            RE   + +  P  F  + EF +I+G+Y  TY+AAN+  T CE  ++D+  PKFI T+ VN++ C+AKD  F RMF  + P   P  S      R  M C    +FN   +  K I      E +          G++  +                  QL CPAA+QL STPL+LLG+DLYNN   +   R  F+  EY  S++ R+ R GPAFGIGGVGNT FR 
Sbjct:   60 RELSADFVRHPLRFVGKREFHLIFGLYTATYMAANVTDTACEYAEMDNQMPKFISTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTC--GASFNAPKVLAKKIEDKGLMEKS----------GAATFA------------------QLVCPAAVQLLSTPLHLLGLDLYNNQGHAVAKRVSFVKREYVKSVLARIGRIGPAFGIGGVGNTYFRN 255          
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG)

HSP 1 Score: 142 bits (357), Expect = 2.400e-37
Identity = 81/224 (36.16%), Postives = 123/224 (54.91%), Query Frame = 1
Query:    1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFR 672
            R+G++ ++++PH F   P+F +I G+Y  TY+ AN + TTCE  + + + PKF+ T++VN++ C+ KD  FTRMF     RP+P +T  +      +   T+  +F+  +V   T        + Y      + + + +                  QLACPAA+Q  STP++LLG+DLYN P  SA  R   +  EY  S I R++R GPAFGIGG+GN  FR
Sbjct:   85 RQGLQHLVIRPHRFVVTPQFRLILGLYFSTYLTANAVTTTCEHLERNASAPKFVSTTLVNMSFCIYKDRAFTRMFGLTAARPLPLATYGLFASRDAL---TVAASFNAPEVVSATL-------LRYGAVWDKRSADVVA------------------QLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280          
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: G4ZUB7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZUB7_PHYSP)

HSP 1 Score: 139 bits (351), Expect = 5.570e-37
Identity = 88/229 (38.43%), Postives = 117/229 (51.09%), Query Frame = 1
Query:    7 GVKEMILK----PHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIP-ASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFRE-GNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 675
            G+KE+ ++    P  F  + EF +I+G+Y  TYV AN++ + CE  + D+  PKFIGT+ VN++ C+AKD  F RMF  + P   P  S      R  M C    +FN   +  K I  +   E GN           S+                     QL CPAA+Q  STPL+L+G+DLYNN   +   R  F+  EY  S+  RV R GPAFGIGGVGNT FR 
Sbjct:   60 GLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAEADNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAAFPLTSIGLFAVRDSMTC--GASFNAPKVLAKKIEDNGLMEKGN----------ASTFA-------------------QLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFRN 257          
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A397V437_9GLOM (Uncharacterized protein n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397V437_9GLOM)

HSP 1 Score: 138 bits (348), Expect = 1.810e-36
Identity = 78/230 (33.91%), Postives = 116/230 (50.43%), Query Frame = 1
Query:    1 REGVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRKYFTSL 690
            + G  E+  +PH F   P FL+++GVY  TY AAN+I T C  T  D+  PKF+GT++ N+ +C+ KD  FTRMF  V P+ +P  T  +      + +   +FN   +  + +T         I  DY  +Q  +                     Q+ CPA +Q+ S  L+L G+DLYN P  S  +R   +   Y  + I R++R GPAFGIGGVGN   ++  + L
Sbjct:   54 KRGFVELFTRPHRFVCTPAFLLVFGVYFTTYTAANVIDTVCSYTNRDNQTPKFLGTTIANMTTCIYKDRAFTRMFGIVAPKSLPLGTYGLFATRDALTI-AASFNLPSVMARELTDRK------IIVDYEKSQNFA---------------------QMLCPAGIQIISCALHLYGLDLYNRPGVSLSSRLSLLKKNYLKTTITRIARIGPAFGIGGVGNRVIKERVSEL 255          
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Match: A0A0L0FIC5_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FIC5_9EUKA)

HSP 1 Score: 137 bits (346), Expect = 3.420e-36
Identity = 83/223 (37.22%), Postives = 117/223 (52.47%), Query Frame = 1
Query:    7 GVKEMILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGTSVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNFSCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGRLQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRVSRTGPAFGIGGVGNTAFRK 675
            GVK++   P  F    +F +IWG+Y  TYV AN++ T  E  + D   PKF+ T+ VN + C+AKD  FTRMF T+ P  +P  +  +     M    TI  +FS L VK   H        ++++Y   +  +L +  LL                 CP A+QL STP++LLG+DLYNN  ++   R  F+  EY  S   R+SR  PAFGIGG+ N  FR+
Sbjct:   68 GVKQLTFTPTSFIRGLDFRLIWGLYTATYVVANVVDTVSELNKKDSAMPKFVVTTAVNGSLCIAKDRAFTRMFGTIAPTSLPIGSYGLFAVRDMA---TIGASFS-LPVKVADH--------MHDEYGYDRKRALFAAQLL-----------------CPMAVQLVSTPMHLLGLDLYNNKTATTSQRASFVGREYLKSTAARISRIAPAFGIGGISNRHFRE 261          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87478.16284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5G8_9STRA7.380e-5744.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A261XX22_9FUNG1.690e-4040.35Uncharacterized protein n=1 Tax=Bifiguratus adelai... [more]
A0A662XCZ4_9STRA2.410e-3837.77Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
H6S466_PLAVT6.410e-3836.89Uncharacterized protein (Fragment) n=1 Tax=Plasmop... [more]
K3WSU5_GLOUD6.930e-3836.13Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
H3GH37_PHYRM1.340e-3738.05Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A433PI02_9FUNG2.400e-3736.16Uncharacterized protein n=1 Tax=Endogone sp. FLAS-... [more]
G4ZUB7_PHYSP5.570e-3738.43Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A397V437_9GLOM1.810e-3633.91Uncharacterized protein n=2 Tax=Gigaspora TaxID=48... [more]
A0A0L0FIC5_9EUKA3.420e-3637.22Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig87478contigH-elongata_contig87478:1243..2696 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score143.3
Seed ortholog evalue1.4e-31
Seed eggNOG ortholog42099.EPrPV00000018360
EggNOG free text desc.Pc13g06010 protein. Source PGD
EggNOG OGs1MEHD@121069,28PN9@1,2QWAD@2759
COG Functional cat.S
Best tax levelPythiales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons3
Model size702
Cds size684
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig87478.16284.1prot_H-elongata_contig87478.16284.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig87478 1243..2678 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931275.280384-CDS-H-elongata_contig87478:1242..16841622931275.280384-CDS-H-elongata_contig87478:1242..1684Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87478 1243..1684 -
1691679769.3666446-CDS-H-elongata_contig87478:1242..16841691679769.3666446-CDS-H-elongata_contig87478:1242..1684Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87478 1243..1684 -
1622931275.2979815-CDS-H-elongata_contig87478:1942..20011622931275.2979815-CDS-H-elongata_contig87478:1942..2001Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87478 1943..2001 -
1691679769.3803153-CDS-H-elongata_contig87478:1942..20011691679769.3803153-CDS-H-elongata_contig87478:1942..2001Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87478 1943..2001 -
1622931275.3172805-CDS-H-elongata_contig87478:2495..26781622931275.3172805-CDS-H-elongata_contig87478:2495..2678Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87478 2496..2678 -
1691679769.3898337-CDS-H-elongata_contig87478:2495..26781691679769.3898337-CDS-H-elongata_contig87478:2495..2678Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig87478 2496..2678 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931275.3407192-UTR-H-elongata_contig87478:2678..26961622931275.3407192-UTR-H-elongata_contig87478:2678..2696Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig87478 2679..2696 -
1691679769.3989322-UTR-H-elongata_contig87478:2678..26961691679769.3989322-UTR-H-elongata_contig87478:2678..2696Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig87478 2679..2696 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig87478.16284.1

>prot_H-elongata_contig87478.16284.1 ID=prot_H-elongata_contig87478.16284.1|Name=mRNA_H-elongata_contig87478.16284.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=228bp
MILKPHVFHSRPEFLMIWGVYAVTYVAANMIITTCERTQVDDTWPKFIGT
SVVNIASCVAKDLQFTRMFATVKPRPIPASTETVRQRPPMICVPTINFNF
SCLKVKYITHHAFREGNIIYNDYLITQGSSLCSPPLLLFVYPLPSPKHGR
LQLACPAAMQLFSTPLNLLGMDLYNNPNSSAMARGKFIVSEYTSSMILRV
SRTGPAFGIGGVGNTAFRKYFTSLFTS*
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mRNA from alignment at H-elongata_contig87478:1243..2696-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig87478.16284.1 ID=mRNA_H-elongata_contig87478.16284.1|Name=mRNA_H-elongata_contig87478.16284.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1454bp|location=Sequence derived from alignment at H-elongata_contig87478:1243..2696- (Himanthalia elongata Himel1 dioecious)
AGGGAAGGAGTCAAGGAAATGATTCTCAAGCCTCACGTTTTCCACAGCCG CCCGGAGTTTTTGATGATCTGGGGTGTCTACGCGGTAACGTACGTTGCCG CAAACATGATCATCACGACTTGTGAGCGAACTCAGGTGGACGACACATGG CCCAAGTTCATCGGTACCAGCGTGGTCAACATCGCCAGTTGTGTCGCAAA GGTAACCACGCTTAACAGGTTCGGGGAGAAACATACAACACATAACTTTA CAATAGCGCCGAGGTCCTGCGTATATAATTTATCTATTCTTGTCTTGTGT AAGTTGTTGTATACACACAACGTGAGTAATGAATACCACGGTTAGCACTG TAAACTAGAAGCAGCGACTGGAGTTCTCATCTCCAGCATCTTCCCCGACG CTATTCGTCGCCGACGTCAAACGACTCGCCCTTGCCGATAAGCCTCTGTG GGATAAAATTGAGCCCATTTATTATTCTTATTGTCTTAAAACGCCATCTA CCTCTCTTTCTCTTCATTCATCCCAGGGTCTCACAATGATTTGTGTTTGT GTTTGTGTGTGTTGTCATTTGTATTCGTGCGCTTGATCGCAAGCTTTTCT CCCATGTAAATATCCCGAAACGTATATAATATGGTCATGTCCCCAATACT TATTTTACCCTTTTGCATGAACATTACTTTTCTTCGTTGGACCAGGACCT CCAATTCACGCGCATGTTCGCAACGGTGAAGCCGAGACCAATTCCAGCCT CGACGTACCTTCTATTCACGGCTCGTGACGGCATGACAGTCGCAGCGTCG TTCAACATGCCGGATCCAGCGTCGCAATACCTCCAGGAGCGGCTGGGAAT GTCGAAGAAGACTGCTGACGTCACTGCCCAGGTATGGAAGCCAGCGGCAA CCAGGGGTGTTCAGTTTACTTGCAGAATTGGTGGTTGGGTTGTTTCTAGT GGAGGAAGCCAATCGAAAGTGGGGCCCTAGGTACATAAACCAAAACAGGA TGCTTTGTGTAGGGAAACTGTAAGGCAACGTCCTCCGATGATCTGTGTAC CCACCATCAACTTTAACTTCAGTTGCCTTAAGGTGAAATATATTACTCAC CATGCCTTCCGCGAGGGTAACATAATATATAATGACTACCTGATAACCCA AGGATCTTCACTGTGCTCTCCGCCGTTGCTCCTCTTCGTGTACCCCCTCC CGTCCCCGAAACATGGCCGTTTGCAGCTTGCGTGCCCAGCCGCCATGCAG CTTTTCTCGACTCCATTGAATCTTCTCGGGATGGATCTTTACAACAACCC GAACAGCAGTGCAATGGCTCGCGGGAAATTCATCGTGTCCGAATATACCT CATCCATGATTTTGCGGGTCAGCCGTACGGGTCCCGCCTTCGGTATCGGG GGTGTAGGTAACACGGCGTTCCGAAAGTACTTCACCTCCTTGTTCACTTC TTAG
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Coding sequence (CDS) from alignment at H-elongata_contig87478:1243..2696-

>mRNA_H-elongata_contig87478.16284.1 ID=mRNA_H-elongata_contig87478.16284.1|Name=mRNA_H-elongata_contig87478.16284.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1368bp|location=Sequence derived from alignment at H-elongata_contig87478:1243..2696- (Himanthalia elongata Himel1 dioecious)
ATGATTCTCAAGCCTCACGTTTTCCACAGCCGCCCGGAGTTTTTGATGAT
CTGGGGTGTCTACGCGGTAACGTACGTTGCCGCAAACATGATCATCACGA
CTTGTGAGCGAACTCAGGTGGACGACACATGGCCCAAGTTCATCGGTACC
AGCGTGGTCAACATCGCCAGTTGTGTCGCAAAGATGATTCTCAAGCCTCA
CGTTTTCCACAGCCGCCCGGAGTTTTTGATGATCTGGGGTGTCTACGCGG
TAACGTACGTTGCCGCAAACATGATCATCACGACTTGTGAGCGAACTCAG
GTGGACGACACATGGCCCAAGTTCATCGGTACCAGCGTGGTCAACATCGC
CAGTTGTGTCGCAAAGGACCTCCAATTCACGCGCATGTTCGCAACGGTGA
AGCCGAGACCAATTCCAGCCTCGACGACCTCCAATTCACGCGCATGTTCG
CAACGGTGAAGCCGAGACCAATTCCAGCCTCGACGGAAACTGTAAGGCAA
CGTCCTCCGATGATCTGTGTACCCACCATCAACTTTAACTTCAGTTGCCT
TAAGGTGAAATATATTACTCACCATGCCTTCCGCGAGGGTAACATAATAT
ATAATGACTACCTGATAACCCAAGGATCTTCACTGTGCTCTCCGCCGTTG
CTCCTCTTCGTGTACCCCCTCCCGTCCCCGAAACATGGCCGTTTGCAGCT
TGCGTGCCCAGCCGCCATGCAGCTTTTCTCGACTCCATTGAATCTTCTCG
GGATGGATCTTTACAACAACCCGAACAGCAGTGCAATGGCTCGCGGGAAA
TTCATCGTGTCCGAATATACCTCATCCATGATTTTGCGGGTCAGCCGTAC
GGGTCCCGCCTTCGGTATCGGGGGTGTAGGTAACACGGCGTTCCGAAAGT
ACTTCACCTCCTTGTTCACTTCTTAGGGAAACTGTAAGGCAACGTCCTCC
GATGATCTGTGTACCCACCATCAACTTTAACTTCAGTTGCCTTAAGGTGA
AATATATTACTCACCATGCCTTCCGCGAGGGTAACATAATATATAATGAC
TACCTGATAACCCAAGGATCTTCACTGTGCTCTCCGCCGTTGCTCCTCTT
CGTGTACCCCCTCCCGTCCCCGAAACATGGCCGTTTGCAGCTTGCGTGCC
CAGCCGCCATGCAGCTTTTCTCGACTCCATTGAATCTTCTCGGGATGGAT
CTTTACAACAACCCGAACAGCAGTGCAATGGCTCGCGGGAAATTCATCGT
GTCCGAATATACCTCATCCATGATTTTGCGGGTCAGCCGTACGGGTCCCG
CCTTCGGTATCGGGGGTGTAGGTAACACGGCGTTCCGAAAGTACTTCACC
TCCTTGTTCACTTCTTAG
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