mRNA_H-elongata_contig87379.16275.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D8LD47_ECTSI (DOMON domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD47_ECTSI) HSP 1 Score: 361 bits (927), Expect = 4.560e-118 Identity = 185/303 (61.06%), Postives = 219/303 (72.28%), Query Frame = 1
Query: 7 KNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVS---TENGGEIPSFCDYDFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
KNFT+P +RT YE++CI SELPA +E+H IGFE I+Q STS+YVHHL L A+TGT +CGQDC ++ + D + S+ S S T N IP FC FA I AW PG AD QLP +VGFRFG+ S YTSL ++THYNN DGD G DSSGVRVYYT+ +R MDMGV+ LGDP V L G + EGKSS+ F+CPG+CTE FE E+VTV+SHFLHMHENGQRM TRQYR + GNE LV + EVEYYSFLQAGG+V N IQKGDRFE C YDT+LSS+ +V FG GSE EM
Sbjct: 218 KNFTVPTNRTHYENSCIPRSELPA-EEFHAIGFEGIIQTSTSKYVHHLTLTAFTGTHDCGQDCIDWVLANLPDDDEPSSQSAYSDPYTFNNMTIPDFCYQQFANIFAWAPGSADVQLPGNVGFRFGNDS--YTSLRVETHYNNPDGDAGEVDSSGVRVYYTEDIREMDMGVITLGDPSVDLIGTKLPEGKSSVEFDCPGACTETYFEAESVTVYSHFLHMHENGQRMETRQYRNDSDGNEQLVDATEVEYYSFLQAGGHVTAHNGSDIIQKGDRFETTCYYDTSLSSVDSTNVTFGEGSEQEM 517
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D7G217_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G217_ECTSI) HSP 1 Score: 340 bits (872), Expect = 8.560e-112 Identity = 178/337 (52.82%), Postives = 217/337 (64.39%), Query Frame = 1
Query: 7 KNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSY---------------------------------YDTNSSSAPSYVST-ENGG-EIPSFCDY--DFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
KNF+IP RTWYEDTCI+ASELP LDEYHVI FE +LQ T+EYVHHLVL + G +CG C E+ + + Y ++ SS+ S+ EN +PSFC DFA I W PG ++ +LP+DVGF FG+ SGG+ SL +QTHYNN DG G DSSGVRVYYT+ LR + MGVL LGDP V L + + EGKSS SF CPG+C+E NFE E VT+F+H LHMHENGQRM+T QYR + GNE L+H+ EV YYSFLQAG +V N TI+KGD F C+YDT+LSS+ P +V FG GSE EM
Sbjct: 31 KNFSIPTVRTWYEDTCITASELPDLDEYHVIAFEGLLQADTAEYVHHLVLTGFYGASDCGNACNEWLDEMFGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPSDDSSSVSFTEYFENLNITVPSFCSNYGDFADIFLWAPGTSNLELPDDVGFLFGNESGGFNSLNIQTHYNNPDGVSGKNDSSGVRVYYTEELRPIQMGVLKLGDPFVALYDQPLPEGKSSFSFGCPGTCSETNFEEEEVTIFNHVLHMHENGQRMVTHQYRDDGEGNEELIHTTEVGYYSFLQAGAHVVTVNGSATIKKGDSFTTQCMYDTSLSSVDPANVTFGEGSEQEM 367
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D7G337_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G337_ECTSI) HSP 1 Score: 345 bits (884), Expect = 1.240e-111 Identity = 180/335 (53.73%), Postives = 223/335 (66.57%), Query Frame = 1
Query: 7 KNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSY-------------------------------YDTNSSSAPSYVST-ENGG-EIPSFCDY--DFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
KNF+IP RTWYEDTCI+ASELP LDEYHVI FE +LQ T+EYVHHLVL + G +CG C E+ + + Y ++ SS+ S+ EN +P+FC + A I W PG ++ +LP+DVGF FG+ SGG+ SL +QTHYNN DG G DSSGVRVYYT+ LR + MG++ LGDP V L + + EGKSS SF CPGSC+E NFE E VTVF H LHMHENGQRM+TRQYR + GNEVL+H+AEVEYYS LQAGG++ N +TI+KGDRF +C+YDT+LSS+S +V FGLGSE EM
Sbjct: 187 KNFSIPTVRTWYEDTCITASELPDLDEYHVIAFEGLLQADTAEYVHHLVLTGFYGASDCGHACNEWLDEIFGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXSYPSDDSSSVSFTEYFENLNITVPTFCSNYGEQADIFLWAPGTSNLELPDDVGFLFGNESGGFNSLNIQTHYNNPDGVSGKNDSSGVRVYYTEELRPIQMGLMKLGDPFVALYDQPLPEGKSSFSFGCPGSCSETNFEEEEVTVFIHMLHMHENGQRMVTRQYRNDSDGNEVLIHTAEVEYYSVLQAGGHLVTNNETITIRKGDRFTTECMYDTSLSSVSSANVTFGLGSEQEM 521
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D7FP38_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP38_ECTSI) HSP 1 Score: 335 bits (860), Expect = 3.100e-108 Identity = 170/302 (56.29%), Postives = 211/302 (69.87%), Query Frame = 1
Query: 7 KNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVSTENGGEIPSFCD--YDFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
KNF+IP RTWYE+TCI ASELP LDEYH IGFE +LQ+ T+E+VHHLVL + G +CG C E+ + + D SS + S ++ +P FC+ D A I W PG+ LP+DVGF FG+ SGG SL +Q HYNN DG G DSSGVRVYYT+ LR M+MG++ LGDP L + + +GKS SF CPG+CTE FE E VTVFSH LHMHENGQR+ TRQYR + GNEVL+H+AEVEYYSFLQAG +V N+ TI+KGD F +C YDT+ SS+ +V +GLGSE+EM
Sbjct: 210 KNFSIPTVRTWYENTCIPASELPKLDEYHAIGFEGVLQDDTAEFVHHLVLTGFYGPPDCGNACFEWMDEMFGDGGSSYSSSDMTNIT---LPWFCNDLEDAADIFIWAPGMQSLDLPDDVGFLFGNESGGLNSLRVQVHYNNADGVSGKNDSSGVRVYYTEELRPMNMGLVKLGDPQGALHPQPLPDGKSVYSFGCPGTCTETYFEEEEVTVFSHLLHMHENGQRISTRQYRNDGDGNEVLIHTAEVEYYSFLQAGVHVVTVNDSTTIKKGDVFTTECYYDTSYSSVGSPNVTWGLGSENEM 508
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D7G216_ECTSI (DOMON domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G216_ECTSI) HSP 1 Score: 328 bits (841), Expect = 5.450e-105 Identity = 171/332 (51.51%), Postives = 215/332 (64.76%), Query Frame = 1
Query: 7 KNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAE-----FFSDSYYDTNSS-------------SAPSYVSTENGG------------EIPSFCDY--DFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
KNF+IP RTWYE+TCI+ASELP LDEYH I FE +LQ T+EYVHHL+L + G +CG+ C+E F S+ D++S+ S SY S ++ +PSFC + A I W PG ++ +LP DVGF G+ SGG+ SL +QTHYNN DG G DSSGVRVYYT+ LR + MGVL LGDP + L + + +GKSS SF CPG+C+E NFE E VT+F+H LHMHENGQRM+T QYR + GNE L+H+ EV YYS LQAG +V N TI+KGD F C+YDT+LSS+ +V FGLGSE EM
Sbjct: 208 KNFSIPTVRTWYENTCITASELPDLDEYHAIAFEGLLQADTAEYVHHLILTGFYGASDCGKACSEWLDEMFASEDGSDSSSTVEGGXXXXXXXXXSGSSYPSDDSSSVSFTEYFENLNITVPSFCSNYGEQADIFVWAPGTSNLELPGDVGFLLGNESGGFNSLNIQTHYNNPDGVSGKNDSSGVRVYYTEELRPIQMGVLKLGDPFIALSDQPLPDGKSSFSFGCPGTCSETNFEEEEVTIFNHVLHMHENGQRMVTHQYRDDGEGNEELIHTTEVWYYSSLQAGAHVVTVNGSATIKKGDSFTTQCMYDTSLSSVGSANVTFGLGSEQEM 539
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: A0A6H5K5A3_9PHAE (Cu2_monoox_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A3_9PHAE) HSP 1 Score: 216 bits (550), Expect = 6.810e-65 Identity = 117/208 (56.25%), Postives = 136/208 (65.38%), Query Frame = 1
Query: 358 VGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTI-------------------------QKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
VGFRFG+ S YTSL ++TH NN DGD G DSS VRVYYT+ +R MDMGV+ LGDP V L G + EGKSS+ F+CPG CTE E E+VTV+SHFLHMH NGQRM TRQYR + GNE LV + EVEYYSFLQAGG+V A+NG I QKGD FE C YDT+LSS+ +V FG GSE+ M
Sbjct: 19 VGFRFGNDS--YTSLRVETHNNNPDGDAGEVDSSSVRVYYTEGIREMDMGVITLGDPNVDLTGTKLPEGKSSVEFDCPGVCTETYLEAESVTVYSHFLHMHGNGQRMETRQYRSDSDGNEQLVDATEVEYYSFLQAGGHV-TAHNGSDIIQYIHYLLPPNAFVLPCLAFVSVFLQKGDSFETTCYYDTSLSSVDSTNVTFGEGSEEGM 223
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: D7FP36_ECTSI (Cu2_monoox_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP36_ECTSI) HSP 1 Score: 179 bits (455), Expect = 4.510e-52 Identity = 84/135 (62.22%), Postives = 105/135 (77.78%), Query Frame = 1
Query: 502 MGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
MGV+ LGDP V LE +++ +GKS+ SF CP +CTE +FE E VTVFSH LHMHENGQRM+TRQYR + GNEVL+H+A+VEYYSFLQAG +V N+ TI+KGD F +C YDT+ SS+ +V FGLGSE+EM
Sbjct: 1 MGVIKLGDPYVALESQTLPDGKSTFSFGCPSTCTETHFEEEEVTVFSHLLHMHENGQRMLTRQYRTDSDGNEVLLHTADVEYYSFLQAGAHVVSVNDSTTIKKGDVFTTECFYDTSYSSVDSSNVTFGLGSENEM 135
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: A0A6U4MP62_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4MP62_HEMAN) HSP 1 Score: 156 bits (394), Expect = 4.780e-40 Identity = 104/312 (33.33%), Postives = 153/312 (49.04%), Query Frame = 1
Query: 1 MQKNFTIPADR-TWYEDTCISASEL-PA---LDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVSTENGGEIPSFCDYDFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISE----GKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANN-GMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
+Q + IP DR T Y + C ++ PA E+H++GFE L T +++HH V+ A G DC EN + + W PGI P + G R +GG+ ++ +Q HY+N G+ DSSG ++YT+ LR D G+L LGDP + L + I E G S ++ P +EV+ VTVF F+HMH+ G+RM+TRQYR E LV + +YY F Q+GG+ ++ G I+KGD F+++C Y + I +FGL S+DEM
Sbjct: 207 LQSDHPIPDDRSTQYHEECYILKDIMPAGSEAGEFHIVGFEPFLDPRTKKHIHHYVVSA-------GNDC----------------------ENSEGM--------TVVWLWGPGIPGYVFPPEAGVRI--MTGGFQAIHIQIHYDNPTLISGLVDSSGFSIFYTNQLRQFDAGILQLGDPNILLFKQPIKEKDGSGYSHLTLTNPARDCTGKWEVDEVTVFERFMHMHKAGERMVTRQYRDGE-----LVRTDFCDYYDFFQSGGFSPRSTAAGFKIKKGDTFDVECFYYSNDKMI-----RFGLASDDEM 469
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: A0A7S0ASV8_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ASV8_9STRA) HSP 1 Score: 152 bits (383), Expect = 3.270e-38 Identity = 104/305 (34.10%), Postives = 144/305 (47.21%), Query Frame = 1
Query: 10 NFTIPADRTWYEDTCISASEL-----PALDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVSTENGGEIPSFCDYDFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNG-MTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
N I D T Y D C S +L PA H+IGFE ++ ++ +++HHLV+ +G D D + S +GG A + PG ++P++ G G Y L HY+N D G+TDSSGVR+YYT R D G+L LGDP V L G+ I +G F CP SCT NF E VTV+ LHMHE G+ M R E ++ A V+Y+ F QAG +++ G TI+ GD C ++T S +++G GS+DEM
Sbjct: 229 NHPISLDETEYVDLCFSHEDLINLGMPADVPLHIIGFEPLIDSA--KHLHHLVMFG-SGFDG--------------DLTNGSCDQTAVAMSGG---------LALTWGYAPGGVPWEMPDEAGVPLGPGEDSYKMFYLNYHYDNRWQDTGITDSSGVRIYYTSRKRQYDAGILQLGDPIVQLAGEPIGQGLVRHDFNCPSSCTSFNFR-EEVTVYKEVLHMHEKGEFMFNEIIRDGE-----VMRRASVDYFDFEQAG--LHEVQQGTFTIKPGDSIRTSCSFNTTSSKKG---IEYGYGSQDEM 496
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Match: A0A1Z5JSD8_FISSO (DOMON domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JSD8_FISSO) HSP 1 Score: 136 bits (342), Expect = 1.400e-32 Identity = 100/303 (33.00%), Postives = 142/303 (46.86%), Query Frame = 1
Query: 10 NFTIPADRTWYEDTCISASELPA----LDEYHVIGFEAILQNSTSEYVHHLVLIAYTGTDNCGQDCAEFFSDSYYDTNSSSAPSYVSTENGGEIPSFCDYDFAYIHAWTPGIADEQLPEDVGFRFGSASGGYTSLVLQTHYNNIDGDEGVTDSSGVRVYYTDTLRSMDMGVLALGDPGVYLEGKSISEGKSSISFECPGSCTEANFEVENVTVFSHFLHMHENGQRMITRQYRKNESGNEVLVHSAEVEYYSFLQAGGYVYKANNGMTIQKGDRFEIDCLYDTALSSISPDDVKFGLGSEDEM 906
N IP T Y D C S +L A +++ V+GFE IL E++HH L SY NG ++ D+ I+ W G LP DVG G G Y S L+ HY+N EGV DSSGVR YY++ +R +++G+L LGDP + LEG+ + +G + F+CP +CTE + E VTV +LHMH G M R E ++H+ V+Y+ F Q G + K T++KGD + C YD + + FG S++EM
Sbjct: 228 NHPIPNVDTEYFDYCYSWDDLLAQGVPAEKFSVVGFEPILD--AIEHLHHFTLFG----------------------------SYEPM-NGEPCSAYADH-LDLIYGWAKGEDPAALPLDVGLYIGP--GTYQSFRLEIHYDNPQLKEGVLDSSGVRFYYSEKMRPVELGLLRLGDPIISLEGQPVGDGLTQHIFDCPSTCTETMLKQE-VTVLREYLHMHYAGATMQNELIRDGE-----VIHTGTVDYFRFDQQGNQLVK-QMPYTVKKGDAYRTICNYDDKGRNAT-----FGFSSQEEM 484 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87379.16275.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87379.16275.1 >prot_H-elongata_contig87379.16275.1 ID=prot_H-elongata_contig87379.16275.1|Name=mRNA_H-elongata_contig87379.16275.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=303bp MQKNFTIPADRTWYEDTCISASELPALDEYHVIGFEAILQNSTSEYVHHLback to top mRNA from alignment at H-elongata_contig87379:229..2363+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87379.16275.1 ID=mRNA_H-elongata_contig87379.16275.1|Name=mRNA_H-elongata_contig87379.16275.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2135bp|location=Sequence derived from alignment at H-elongata_contig87379:229..2363+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87379:229..2363+ >mRNA_H-elongata_contig87379.16275.1 ID=mRNA_H-elongata_contig87379.16275.1|Name=mRNA_H-elongata_contig87379.16275.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1818bp|location=Sequence derived from alignment at H-elongata_contig87379:229..2363+ (Himanthalia elongata Himel1 dioecious)back to top |