mRNA_H-elongata_contig87310.16272.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE) HSP 1 Score: 251 bits (641), Expect = 2.990e-72 Identity = 165/495 (33.33%), Postives = 262/495 (52.93%), Query Frame = 1
Query: 37 WKRAIAREMDGQTARGVWQVVER-PKGKTVLGTRVVFKHKIDKDGKIEKYKCRLVEQGFRQVKGIHYEESSSPTPAQVSIRMELSMIAALGWEVRQLDVDMAYLEVDVEEEIYIERPEAYRDSRKQVGLLKKAMYGLVHAGLLWSKPFGIELEAKGFQRSQADPCVFRRILHGVVVFVIVVYVDDLLVASATKRVEEQAVKDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTLDQHQYIQTMAERFGVTKTSIIP-SVAGGKALLKSDSPQTNATVEEMRQIPYQEVGGALMWAATMTRPDTLEG---------QPRK-------RCNIY-------------------GALGTSGSPTEGNRGDETNVGGG-GMMAGGAISWFSRVQKVTAAASSESEYVALAEMLNELRFLQRVKEFMTPPIDVA-IKIHEDNEGALKMARNRFSSRGTRHVDIKHHIVRDATEGGLAHVEYVRSGEQLADILTKSVDVKTF 1404
W +A++ E++G G + + + P+G V+ R VFK K D+ GKI K K RLV +GF+Q G+ Y E+ SPT SIR+ +++ E+ LD++ A+ + ++ E+ ++ P ++ L K++YGL A + K +L GF++S +DPCV R ++ V+ +I ++VDD+L A TKR+ E V+ L P K+LGE ++LGC +RDR AGT+ + Q YI+++ ERF + +TS IP S A + D EE +P++EV G LMW A TRP+T +P+K + Y G L + D +V G ++AG +SWFS QK + ++SE+EY+A+ + + E F+ + + + P I + EDNEGA+ +A N SS ++H+D++HH +R+ TE G+ V +V S EQ ADILTK++ F
Sbjct: 228 WDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDILYAG-TKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPASPANDSRSVMED--------EEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLF 713
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY) HSP 1 Score: 258 bits (660), Expect = 3.170e-72 Identity = 173/499 (34.67%), Postives = 264/499 (52.91%), Query Frame = 1
Query: 1 MGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKHKIDKDGKIEKYKCRLVEQGFRQVKGIHYEESSSPTPAQVSIRMELSMIAALGWEVRQLDVDMAYLEVDVEEEIYIERPEAYRDSRKQ--VGLLKKAMYGLVHAGLLWSKPFGIELEAKGFQRSQADPCVF-RRILHGVVVFVIVVYVDDLLVASATKRVEEQAVKDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTLDQHQYIQTMAERFGVTKT-SIIPSVAGGKALLKSDSPQTNATVEEMRQIPYQEVGGALMWAATMTRPDTL------------EGQPR----KRCNIYGALG-----TSGSPTEGNRGDETNVGGGG-----------MMAGGAISWFSRVQKVTAAASSESEYVALAEMLNELRFLQRVKEFMTPP--IDVAIKIHEDNEGALKMARNRFSSRGTRHVDIKHHIVRDATEGGLAHVEYVRSGEQLADILTK 1383
+ EA S+EWP+WK AIA+EM + G + +VE PK ++G++ VF+ K + +G+IE YK RLV QGF QV GI + E+ +P SIR+ L++ A WE+ Q+DV AYL D+EEEIY+ +P + K+ V LK+ +YGL +G + K EL + G RS+ D CVF R V++ +I + VDD +A TK +++ + F + DLGE + LG + RDR+A TL+L Q YI + RF + S+ + G L P T E+M+ IPY+E G+LM+AA TRPD G+P KR Y A T G T+G G G ++ GGA+SW ++ Q V A +S+E+EY+A+ E +L+ + + P + +++H DN+ A+ +A++ T+H+DI+ H +R+ E G ++Y R+ + ADI TK
Sbjct: 925 LNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDGVEGFSDADWGSAEHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADVLHPDILRYPVRLHSDNKSAIALAKDDAYHARTKHIDIRFHFIRETVENGQVILQYRRTEDMPADIFTK 1422
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY) HSP 1 Score: 248 bits (632), Expect = 1.200e-71 Identity = 168/499 (33.67%), Postives = 257/499 (51.50%), Query Frame = 1
Query: 1 MGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKHKIDKDGKIEKYKCRLVEQGFRQVKGIHYEESSSPTPAQVSIRMELSMIAALGWEVRQLDVDMAYLEVDVEEEIYIERPEAYRDSRKQ--VGLLKKAMYGLVHAGLLWSKPFGIELEAKGFQRSQADPCVF-RRILHGVVVFVIVVYVDDLLVASATKRVEEQAVKDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTLDQHQYIQTMAERFGVTKT-SIIPSVAGGKALLKSDSPQTNATVEEMRQIPYQEVGGALMWAATMTRPDTL------------EGQPR----KRCNIYGALG-----TSGSPTEGNRGDETNVGGGG-----------MMAGGAISWFSRVQKVTAAASSESEYVALAEMLNELRFLQRVKEFMTPP--IDVAIKIHEDNEGALKMARNRFSSRGTRHVDIKHHIVRDATEGGLAHVEYVRSGEQLADILTK 1383
+ EA S+EWP+WK AI +EM + G + +VE PK ++G++ VF+ K + + +IE YK RLV QGF QV GI + E+ +P SI + L++ A WE+ Q+DV AYL D+EEEIY+++P + K+ V LK+ +YGL +G + K EL + G RS+ D CVF R V++ +I + VDD +A TK +++ + F + DLGE + LG + RDR+ TL+L QH YI + RF + S+ + G L P T E+M+ IPY+EV G+LM+AA TRPD GQP KR Y A T G T+G G G ++ G A+SW ++ Q V A +S+E+EY+A+ E +L + + P + +++H DN+ + +A++ T+H+DI+ H + E G ++Y + + ADI TK
Sbjct: 115 LNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAG-TKAAVFWFKREISTRFKMSDLGEMHWILGIEVQRDRDVRTLSLSQHVYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREVIGSLMYAALGTRPDIAYAITALSQFMQNPGQPHWEAAKRVFRYLAGTRERWLTFGETTDGVEGFSDADWGSAEHRHSISGYVFLLDGSAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLHSLLADVLHPDILRYPVRLHSDNKSVIALAKDDAYHARTKHIDIRFHFIHKTVENGQVILQYCCTEDMPADIFTK 612
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 254 bits (650), Expect = 4.530e-71 Identity = 165/494 (33.40%), Postives = 259/494 (52.43%), Query Frame = 1
Query: 37 WKRAIAREMDGQTARGVWQVVE-RPKGKTVLGTRVVFKHKIDKDGKIEKYKCRLVEQGFRQVKGIHYEESSSPTPAQVSIRMELSMIAALGWEVRQLDVDMAYLEVDVEEEIYIERPEAYRDSRKQVGLLKKAMYGLVHAGLLWSKPFGIELEAKGFQRSQADPCVFRRILHGVVVFVIVVYVDDLLVASATKRVEEQAVKDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTLDQHQYIQTMAERFGVTKTSIIPSVAGGKALLKSDSPQTNATVEEMRQIPYQEVGGALMWAATMTRPDTLEG---------QPRKRC-----NIYGAL-GTSGSPTEGNRG-----------------DETNVGGGGMMAGGAI-SWFSRVQKVTAAASSESEYVALAEMLNELRFLQRVKEFMTPPID-VAIKIHEDNEGALKMARNRFSSRGTRHVDIKHHIVRDATEGGLAHVEYVRSGEQLADILTKSVDVKTFEKH 1413
W++A+ E +G G + V+ P+G+ + ++ F K +K+GKI+ +K RLV +GF Q+ + Y SSSP P+ SI++ L++ G + DV AY ++EE++++ P D ++ ++A+YGL +G W L GF++ +ADPCVFR+++ VVV +IV+YVDD+LVA + + EE + L FP K+LGE ++ GC I RD AGTL + Q YI +M ERF V TS IP+ G K + EE + P +E G++MW +T +RPD P KR I G L GT RG D +V G GG + S S+ Q + + +S+E+EY+A E + E F++ V F+ P +IK+ EDN+GA+ + +N SS T+H+D+++H +R G V++V + EQ AD+LTK++ + + H
Sbjct: 752 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 1237
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 254 bits (650), Expect = 7.510e-71 Identity = 165/494 (33.40%), Postives = 259/494 (52.43%), Query Frame = 1
Query: 37 WKRAIAREMDGQTARGVWQVVE-RPKGKTVLGTRVVFKHKIDKDGKIEKYKCRLVEQGFRQVKGIHYEESSSPTPAQVSIRMELSMIAALGWEVRQLDVDMAYLEVDVEEEIYIERPEAYRDSRKQVGLLKKAMYGLVHAGLLWSKPFGIELEAKGFQRSQADPCVFRRILHGVVVFVIVVYVDDLLVASATKRVEEQAVKDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTLDQHQYIQTMAERFGVTKTSIIPSVAGGKALLKSDSPQTNATVEEMRQIPYQEVGGALMWAATMTRPDTLEG---------QPRKRC-----NIYGAL-GTSGSPTEGNRG-----------------DETNVGGGGMMAGGAI-SWFSRVQKVTAAASSESEYVALAEMLNELRFLQRVKEFMTPPID-VAIKIHEDNEGALKMARNRFSSRGTRHVDIKHHIVRDATEGGLAHVEYVRSGEQLADILTKSVDVKTFEKH 1413
W++A+ E +G G + V+ P+G+ + ++ F K +K+GKI+ +K RLV +GF Q+ + Y SSSP P+ SI++ L++ G + DV AY ++EE++++ P D ++ ++A+YGL +G W L GF++ +ADPCVFR+++ VVV +IV+YVDD+LVA + + EE + L FP K+LGE ++ GC I RD AGTL + Q YI +M ERF V TS IP+ G K + EE + P +E G++MW +T +RPD P KR I G L GT RG D +V G GG + S S+ Q + + +S+E+EY+A E + E F++ V F+ P +IK+ EDN+GA+ + +N SS T+H+D+++H +R G V++V + EQ AD+LTK++ + + H
Sbjct: 1131 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 1616
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 254 bits (650), Expect = 7.750e-71 Identity = 165/494 (33.40%), Postives = 259/494 (52.43%), Query Frame = 1
Query: 37 WKRAIAREMDGQTARGVWQVVE-RPKGKTVLGTRVVFKHKIDKDGKIEKYKCRLVEQGFRQVKGIHYEESSSPTPAQVSIRMELSMIAALGWEVRQLDVDMAYLEVDVEEEIYIERPEAYRDSRKQVGLLKKAMYGLVHAGLLWSKPFGIELEAKGFQRSQADPCVFRRILHGVVVFVIVVYVDDLLVASATKRVEEQAVKDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTLDQHQYIQTMAERFGVTKTSIIPSVAGGKALLKSDSPQTNATVEEMRQIPYQEVGGALMWAATMTRPDTLEG---------QPRKRC-----NIYGAL-GTSGSPTEGNRG-----------------DETNVGGGGMMAGGAI-SWFSRVQKVTAAASSESEYVALAEMLNELRFLQRVKEFMTPPID-VAIKIHEDNEGALKMARNRFSSRGTRHVDIKHHIVRDATEGGLAHVEYVRSGEQLADILTKSVDVKTFEKH 1413
W++A+ E +G G + V+ P+G+ + ++ F K +K+GKI+ +K RLV +GF Q+ + Y SSSP P+ SI++ L++ G + DV AY ++EE++++ P D ++ ++A+YGL +G W L GF++ +ADPCVFR+++ VVV +IV+YVDD+LVA + + EE + L FP K+LGE ++ GC I RD AGTL + Q YI +M ERF V TS IP+ G K + EE + P +E G++MW +T +RPD P KR I G L GT RG D +V G GG + S S+ Q + + +S+E+EY+A E + E F++ V F+ P +IK+ EDN+GA+ + +N SS T+H+D+++H +R G V++V + EQ AD+LTK++ + + H
Sbjct: 1294 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 1779
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE) HSP 1 Score: 254 bits (648), Expect = 8.460e-71 Identity = 162/496 (32.66%), Postives = 252/496 (50.81%), Query Frame = 1
Query: 34 QWKRAIAREMDGQTARGVWQVVER-PKGKTVLGTRVVFKHKIDKDGKIEKYKCRLVEQGFRQVKGIHYEESSSPTPAQVSIRMELSMIAALGWEVRQLDVDMAYLEVDVEEEIYIERPEAYRDSRKQVGLLKKAMYGLVHAGLLWSKPFGIELEAKGFQRSQADPCVFRRILHGVVVFVIVVYVDDLLVASATKRVEEQAVKDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTLDQHQYIQTMAERFGVTKTSIIPSVAGGKALLKSDSPQTNATVEEMRQIPYQEVGGALMWAATMTRPDTLEGQPRKRCNIYGA--------------------LGTS--------------GSPTEGNRGDETNVGGGGMMAGGAISWFSRVQKVTAAASSESEYVALAEMLNELRFLQRVKEFMTPPIDVA-IKIHEDNEGALKMARNRFSSRGTRHVDIKHHIVRDATEGGLAHVEYVRSGEQLADILTKSVDVKTFEKH 1413
QW AI +EMDG G + +E+ P+G+ + T+ VF +K D+ G I +K RLV +GF QV G Y SSS PA SI++ ++ G R D+ AY ++EE+Y+ + +V +++A+YGL +G W L G+++ +ADPCVFR+I+ G VV +IV+YVDD++ + + EE + L P+KDLGE ++Y GC I RD GT TL Q YI + +RFG+T T+ P+ + K D E P ++ G LMW AT TRPD + N + LG + S + + G + G + G +S S+ Q++ + ++SE+EY+A E + E F++ V F+ P A IK+ EDN+GA+ + +N FSS ++H+D++ H +R+ + G VEY+ + EQ AD+LTK++ E H
Sbjct: 750 QWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNAELGPKRDD-------EPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDH 1237
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 253 bits (646), Expect = 2.590e-70 Identity = 164/486 (33.74%), Postives = 256/486 (52.67%), Query Frame = 1
Query: 37 WKRAIAREMDGQTARGVWQVVE-RPKGKTVLGTRVVFKHKIDKDGKIEKYKCRLVEQGFRQVKGIHYEESSSPTPAQVSIRMELSMIAALGWEVRQLDVDMAYLEVDVEEEIYIERPEAYRDSRKQVGLLKKAMYGLVHAGLLWSKPFGIELEAKGFQRSQADPCVFRRILHGVVVFVIVVYVDDLLVASATKRVEEQAVKDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTLDQHQYIQTMAERFGVTKTSIIPSVAGGKALLKSDSPQTNATVEEMRQIPYQEVGGALMWAATMTRPDTLEG---------QPRKRC-----NIYGAL-GTSGSPTEGNRG-----------------DETNVGGGGMMAGGAI-SWFSRVQKVTAAASSESEYVALAEMLNELRFLQRVKEFMTPPID-VAIKIHEDNEGALKMARNRFSSRGTRHVDIKHHIVRDATEGGLAHVEYVRSGEQLADILTKSV 1389
W++A+ E +G G + V+ P+G+ + ++ F K +K+GKI+ +K RLV +GF Q+ + Y SSSP P+ SI++ L++ G + DV AY ++EE++++ P D ++ ++A+YGL +G W L GF++ +ADPCVFR+++ VVV +IV+YVDD+LVA + + EE + L FP K+LGE ++ GC I RD AGTL + Q YI +M ERF V TS IP+ G K + EE + P +E G++MW +T +RPD P KR I G L GT RG D +V G GG + S S+ Q + + +S+E+EY+A E + E F++ V F+ P +IK+ EDN+GA+ + +N SS T+H+D+++H +R G V++V + EQ AD+LTK++
Sbjct: 1151 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKRED-------EEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 253 bits (646), Expect = 2.630e-70 Identity = 162/496 (32.66%), Postives = 251/496 (50.60%), Query Frame = 1
Query: 34 QWKRAIAREMDGQTARGVWQVVER-PKGKTVLGTRVVFKHKIDKDGKIEKYKCRLVEQGFRQVKGIHYEESSSPTPAQVSIRMELSMIAALGWEVRQLDVDMAYLEVDVEEEIYIERPEAYRDSRKQVGLLKKAMYGLVHAGLLWSKPFGIELEAKGFQRSQADPCVFRRILHGVVVFVIVVYVDDLLVASATKRVEEQAVKDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTLDQHQYIQTMAERFGVTKTSIIPSVAGGKALLKSDSPQTNATVEEMRQIPYQEVGGALMWAATMTRPDTLEGQPRKRCNIYGA--------------------LGTS--------------GSPTEGNRGDETNVGGGGMMAGGAISWFSRVQKVTAAASSESEYVALAEMLNELRFLQRVKEFMTPPIDVA-IKIHEDNEGALKMARNRFSSRGTRHVDIKHHIVRDATEGGLAHVEYVRSGEQLADILTKSVDVKTFEKH 1413
QW AI +EMDG G + +E+ P+G+ + T+ VF +K D+ G I +K RLV +GF QV G Y SSS PA SI++ ++ G R D+ AY ++EE+Y+ + +V +++A+YGL +G W L G+++ +ADPCVFR+I+ G VV +IV+YVDD++ + + EE + L P+KDLGE ++Y GC I RD GT TL Q YI + +RFG+T T+ P+ K D E P ++ G LMW AT TRPD + N + LG + S + + G + G + G +S S+ Q++ + ++SE+EY+A E + E F++ V F+ P A IK+ EDN+GA+ + +N FSS ++H+D++ H +R+ + G VEY+ + EQ AD+LTK++ E H
Sbjct: 1303 QWDEAIKKEMDGHEKTGTFSKIEKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDSGYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEE-LLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDD-------EPGVDKPVRQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGRISVEYIPTDEQHADLLTKALGRTKLEDH 1790
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 241 bits (614), Expect = 8.650e-70 Identity = 164/504 (32.54%), Postives = 246/504 (48.81%), Query Frame = 1
Query: 7 EAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKHKIDKDGKIEKYKCRLVEQGFRQVKGIHYEESSSPTPAQVSIRMELSMIAALGWEVRQLDVDMAYLEVDVEEEIYIERPEAYRD--SRKQVGLLKKAMYGLVHAGLLWSKPFGIELEAKGFQRSQADPCVFRRILHGVVVFVIVVYVDDLLVASATKRVEEQAVKDLCSCFPIKDLGEASYYLGCHITRDRNAGTLTLDQHQYIQTMAERFGVTKT-SIIPSVAGGKALLKSDSPQTNATVEEMRQIPYQEVGGALMWAATMTRPDTL------------EGQP---------------RKRCNIYGALGTSG----SPTEGNRGDETNVGGGG--MMAGGAISWFSRVQKVTAAASSESEYVALAEMLNELRFLQRVKEFMTPPIDVAIKIHEDNEGALKMARNRFSSRGTRHVDIKHHIVRDATEGGLAHVEYVRSGEQLADILTKSVDVKTFEK 1410
EA+AS EWPQW+ AI E+ G W++ E+P G V+G+ VFK K D G I KYK RLV QGF Q+ G+ Y ++ +P SIR+ ++ A WE+ Q+DV AYL D+EEEI++++P + ++V L K +YGL AG W K GF RS D VF R + ++ V VDDL +A+ + L F + DLGE + LG I RDR T+++ Q YI T+ RF + S+ ++ +L SP T ++MR I Y+E G+LM+AA TRPD G P ++ YG +G S + D G ++ GGA+SW S+ Q + A +S+E+EYVA+ E+ + + + P D ++ DN+ A+ +A++ T+H+ I+ H +RD E G + Y + + AD+LTK + EK
Sbjct: 35 EAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPPGANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGFPTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAIVAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGGDNANGMEGFSDADWGSSDHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTKPLTRPKMEK 538 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87310.16272.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87310.16272.1 >prot_H-elongata_contig87310.16272.1 ID=prot_H-elongata_contig87310.16272.1|Name=mRNA_H-elongata_contig87310.16272.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=471bp MGEAQASSEWPQWKRAIAREMDGQTARGVWQVVERPKGKTVLGTRVVFKHback to top mRNA from alignment at H-elongata_contig87310:946..2414+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87310.16272.1 ID=mRNA_H-elongata_contig87310.16272.1|Name=mRNA_H-elongata_contig87310.16272.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1469bp|location=Sequence derived from alignment at H-elongata_contig87310:946..2414+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87310:946..2414+ >mRNA_H-elongata_contig87310.16272.1 ID=mRNA_H-elongata_contig87310.16272.1|Name=mRNA_H-elongata_contig87310.16272.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2826bp|location=Sequence derived from alignment at H-elongata_contig87310:946..2414+ (Himanthalia elongata Himel1 dioecious)back to top |