mRNA_H-elongata_contig87132.16260.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: D8LS39_ECTSI (Utp12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS39_ECTSI) HSP 1 Score: 392 bits (1008), Expect = 9.000e-126 Identity = 224/299 (74.92%), Postives = 251/299 (83.95%), Query Frame = 1
Query: 1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVA--GAAGFAPPS---KPVGEVEGDEGVEAANGGA--QAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMMESEEDRLVKKMRQ 876
+AW LEVS DGSFVLSGGHDRSLR+WRRT+EMVFLEEEREKE+EGLFE+ELDRDDVA GA G A P+ KP G EG +G A+GG QAESGPATKRS+ESVKAGERLMDALELA E KLMR +E+AAA+A+++GEPAP RRPNP+LLNL PLRY+LRTLQ MIKTPELEQALLVLPFSQVE+LA FLVRLLAAGLEVELCARCA+FLLRVHQARIVS+GSMV VLDALR NLRRQLEASRD VG NMAGLR+LGR+ E+++ AY+MESEEDRL K+MRQ
Sbjct: 755 EAWTLEVSPDGSFVLSGGHDRSLRLWRRTEEMVFLEEEREKEMEGLFESELDRDDVAAPGADGLALPAPQRKPEGTEEGGDGDGGASGGGAQQAESGPATKRSLESVKAGERLMDALELAELELKLMREEERAAAKARRRGEPAPPARRPNPILLNLSPLRYVLRTLQ-------------MIKTPELEQALLVLPFSQVESLANFLVRLLAAGLEVELCARCAVFLLRVHQARIVSTGSMVVVLDALRNNLRRQLEASRDVVGRNMAGLRILGRLAEEDKNAYLMESEEDRLAKRMRQ 1040
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A7S3XPK1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPK1_HETAK) HSP 1 Score: 206 bits (524), Expect = 1.400e-61 Identity = 133/278 (47.84%), Postives = 169/278 (60.79%), Query Frame = 1
Query: 1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYM 834
+ W+L VS DGSF++SG HDRSLR+W RTDE VFLEEEREKE+E +FE G P + E EG ES A+KR+IESV++GERLMDA+E+A EE+ + EK + +KG+P R+PNP++L PL YIL TLQ I+ ELEQALLVL ++ E L FL RLLA G EVEL AR AIFLLR HQA+I++ S+V L ALR LRR+LE +D +G N+AGL L R +E + Y+
Sbjct: 33 EVWSLAVSNDGSFLISGSHDRSLRVWERTDEPVFLEEEREKEMEAMFEE-----------GLGQPDRDA--EENQEG----------ESALASKRTIESVRSGERLMDAIEIAVSEEEAIEEHEKKNKKLDKKGQPRLKDRQPNPLMLGKSPLAYILFTLQ-------------QIRPAELEQALLVLSYTFAEPLISFLQRLLARGAEVELAARAAIFLLRTHQAQIIAHHSLVGELTALRWALRRRLEGQKDLLGTNLAGLAYLRRKIEADSNTYL 274
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A7S3XPJ0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XPJ0_HETAK) HSP 1 Score: 201 bits (511), Expect = 1.990e-59 Identity = 130/266 (48.87%), Postives = 164/266 (61.65%), Query Frame = 1
Query: 1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRML 798
+ W+L VS DGSF++SG HDRSLR+W RTDE VFLEEEREKE+E +FE G P + E EG ES A+KR+IESV++GERLMDA+E+A EE+ + EK + +KG+P R+PNP++L PL YIL TLQ I+ ELEQALLVL ++ E L FL RLLA G EVEL AR AIFLLR HQA+I++ S+V L ALR LRR+LE +D +G N+AGL M+
Sbjct: 33 EVWSLAVSNDGSFLISGSHDRSLRVWERTDEPVFLEEEREKEMEAMFEE-----------GLGQPDRDA--EENQEG----------ESALASKRTIESVRSGERLMDAIEIAVSEEEAIEEHEKKNKKLDKKGQPRLKDRQPNPLMLGKSPLAYILFTLQ-------------QIRPAELEQALLVLSYTFAEPLISFLQRLLARGAEVELAARAAIFLLRTHQAQIIAHHSLVGELTALRWALRRRLEGQKDLLGTNLAGLVMI 262
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A5D6Y6H3_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6H3_9STRA) HSP 1 Score: 174 bits (441), Expect = 2.050e-45 Identity = 121/285 (42.46%), Postives = 166/285 (58.25%), Query Frame = 1
Query: 1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDD----VAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELA-AQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMME 840
+ W L VSADGSFV+S DRSL + RT++ VFLEEEREKE+E LFE EL + G G A S GE E EG GGA A A KR++ESVKAGE LM+A+ELA A+ + +++AA +AK PA R PN +LL PL+Y+L L+ ++ E+E+AL+VLPF VE L L++L+++ LEVE C ++LL++H I + + L+ L LRRQL ++ +G N+AGLR L R V+ ERT ++ E
Sbjct: 677 EVWGLAVSADGSFVVSCSQDRSLVKYVRTEDQVFLEEEREKEMEQLFEDELSKSSRGAPALGGKGLATDSSKAGEGEDAEG-----GGASAS---AAKRTVESVKAGESLMEAVELADAELAAIAEYEKRAAKKAKDPKAPALAPRTPNILLLGYSPLKYVLNALRR-------------VRPHEMEEALIVLPFEHVEKLIGLLLQLISSHLEVEFCCNVLLYLLKLHHTAICNRKQLFNELELLWQRLRRQLVDKKNRIGFNLAGLRYLKRQVDDERTGFVQE 940
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A1V9ZSC5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSC5_9STRA) HSP 1 Score: 166 bits (421), Expect = 8.940e-43 Identity = 110/281 (39.15%), Postives = 170/281 (60.50%), Query Frame = 1
Query: 1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMMES 843
+ WA+ V+ DGSFV+S DRSL + R+D+ VF+EEE+EKELE +FEA+L+ + A AP + AN +AES A+K+++++VK+GERL++A++LA + K AD+ PG N ++L PL+++LR L+ I+ +LE+ALLVLPF VE L KFL++L+AAGLEVELC +FL++VH +IV++ S++ LDAL +LR L A ++ +G N+AG++ + R V+ +TA+ E+
Sbjct: 651 EVWAIAVARDGSFVVSASQDRSLVKYARSDDQVFIEEEKEKELEAMFEADLNPTNTA-----APT------------LNGANAVVEAESATASKKTVQTVKSGERLIEAIDLAEHDRK---ADK-------------PGT---NILMLGYSPLKFVLRALRE-------------IRAQDLEEALLVLPFDYVEKLIKFLLQLIAAGLEVELCCSSVLFLVKVHHNQIVANTSLLGELDALWHSLRTSLVAGKNRIGFNLAGMKYIKRQVDASKTAFFEEA 882
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: T0QHH9_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QHH9_SAPDV) HSP 1 Score: 163 bits (412), Expect = 1.500e-41 Identity = 107/280 (38.21%), Postives = 165/280 (58.93%), Query Frame = 1
Query: 1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMME 840
+ WA+ V+ DGSF++S DRSL + R+D+ VF+EEE+EKELE +FEA+L+ + + AP + AN +AES ATK++I++VK+GERL++A++LA E K PG N +LL PL+Y+LR+L+ I+ +LE+ALLVLPF V+ L K+L++L+AA LEVELC +FL++VH +IV++ S++ LD L +LR L ++++ +G N+AG++ + R VE +T Y E
Sbjct: 666 EVWAIAVARDGSFLISASQDRSLVKYARSDDQVFIEEEKEKELEAMFEADLNPSNTS-----APT------------LNGANTVLEAESATATKKTIQTVKSGERLIEAIDLAEHEAKAA----------------TPGG---NILLLGFSPLKYVLRSLRE-------------IRAQDLEEALLVLPFDYVQKLIKYLLQLIAAELEVELCCNSILFLVKVHHNQIVANASLLGELDTLWHSLRTNLVSAKNQIGFNLAGMKFIKRQVEANKTGYFEE 896
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A024UV74_9STRA (Utp12 domain-containing protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UV74_9STRA) HSP 1 Score: 158 bits (400), Expect = 6.140e-40 Identity = 107/295 (36.27%), Postives = 169/295 (57.29%), Query Frame = 1
Query: 1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMMESEEDRLVKKMRQPSV 885
+ WA+ VS DGSFV+S DRSL + R D+ VF+EEE+EKEL+ +FE++L + A AP E D AA KR++++VK+GERL++A+++A +E QK P V N +LL PL+++LR+++ I+ E+E+AL+VLPF V+ L +L++L+AA +EVE+C C +FLLRVH +IV++ ++ LD + G+LR QL +S++ +G N+AG++ + R V+Q +T Y+ E KK ++ SV
Sbjct: 657 EVWAVAVSRDGSFVVSASQDRSLVKYTRGDDQVFVEEEKEKELDAMFESDLQPTNTA-----APTLGGTNVKEMDSSTTAA------------KRTVQTVKSGERLIEAIDIADREILA------------QKNSSNPDVVSTNFMLLGYAPLKFVLRSVRE-------------IRANEMEEALMVLPFEYVKKLLSYLLQLIAAEMEVEICCNCILFLLRVHHHQIVTNTILLGELDTMWGSLRAQLVSSKNRIGFNLAGMKYIKRQVDQTKTGYIEELGAAPATKKTKKQSV 909
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A485L7V7_9STRA (Aste57867_17075 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7V7_9STRA) HSP 1 Score: 156 bits (395), Expect = 2.890e-39 Identity = 99/280 (35.36%), Postives = 168/280 (60.00%), Query Frame = 1
Query: 1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMME 840
+ WAL V+ DGSFV+S DRSL + R ++ VF+EEE+EKELE +FE++L+ P+ G V+A ES A+KR++++VK+GERL++A+++A +E K ++ E + N +LL PL+++LR+++ I+ E+E+AL+VLPF V+ L +L++L+AA +EVE+C C +FLLR+H +IV+S +++ LD++ +LR QL S++ +G N+AG++ + R ++Q +TA++ E
Sbjct: 671 EVWALAVAHDGSFVVSASQDRSLVKYARGEDQVFVEEEKEKELEAMFESDLN------------PTNTAAPTLGGLNVKAPE-----ESTTASKRTVQTVKSGERLIEAIDVADRELKQNKSGEASTT---------------NFMLLGFTPLKFVLRSVRE-------------IRANEMEEALMVLPFEYVKKLLSYLLQLIAAEMEVEICCNCVLFLLRLHHHQIVASTTLLGELDSMWSSLRNQLVTSKNRIGFNLAGMKYIKRQIDQHKTAFVEE 905
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: W7T9A4_9STRA (Beta transducin trp-asp domain-containing n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9A4_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.620e-39 Identity = 107/283 (37.81%), Postives = 152/283 (53.71%), Query Frame = 1
Query: 1 QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQK-GEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMMESE 846
+ WA+ V G + +GG DRS+R+W R+D+ VF+EEER++ELE +FE D G G G+E + +ESVK GERL +ALE+ + L K A+QK G P P R PNP++LNL P R++L L+ ++K P+LEQALLVLP + L + L RLL +EVELC RC +FL R H ++ S ++ +L LRG LR +L+ RD V N+ GLR+L R VE+ + A+++ E
Sbjct: 41 EVWAMGVEGGGEVLATGGADRSVRVWERSDDQVFVEEERQRELEEMFE------DGVGKEG-----------RGEEXXXXXX------XXXXXXQHLESVKQGERLSEALEVMRADNGLEEEHLKFLKAARQKPGAPLPPPRAPNPLMLNLPPHRFLLFHLR-------------LLKGPDLEQALLVLPLDLMHLLLRGLCRLLREDMEVELCWRCLLFLFRTHHRLLLHSRDLMPLLMDLRGGLRERLKGFRDGVAMNVEGLRLLKREVEEGKQAFLVPGE 287
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Match: A0A1Z5JEM4_FISSO (U3 small nucleolar RNA-associated protein 12 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEM4_FISSO) HSP 1 Score: 152 bits (383), Expect = 1.240e-37 Identity = 103/281 (36.65%), Postives = 167/281 (59.43%), Query Frame = 1
Query: 10 ALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAELDRDDVAGAAGFAPPSKPVGEVEGDEGVEAANGGAQAESGPATKRSIESVKAGERLMDALELAAQEEKLMRADEKAAARAKQKGEPAPGVRRPNPVLLNLFPLRYILRTLQARGDSGSRYPSCSMIKTPELEQALLVLPFSQVENLAKFLVRLLAAGLEVELCARCAIFLLRVHQARIVSSGSMVAVLDALRGNLRRQLEASRDAVGCNMAGLRMLGRIVEQERTAYMMESEED 852
+L VS G+FVLSGG DR +R+W RT ++VF+EEERE+E+E +F+ DRD+ AA S+ G E +E +N Q+E+ A ++S+ SV +G+R+M+ALE A QE K + +K A R+PNP++LN+ P Y+L L+ +++ ELEQ+LLVLP S +E L +++ LL G VELC++ A+F+++ HQ +I+++ S+ L L+ +R++L RD +G ++A ++++ R+ ER M +ED
Sbjct: 777 SLAVSRTGAFVLSGGMDRQVRVWERTKDIVFIEEEREREMEQMFDRVNDRDEGGTAAIL---SRKRGNDEDEESESGSNDEPQSEA--AVRKSVLSVSSGDRIMEALEQADQETKNIALF--------RKTHGADATRQPNPLMLNMEPANYVLWVLKT-------------VRSAELEQSLLVLPVSHLERLLYYMIVLLRNGRGVELCSKVAVFMVKSHQNQIIANKSLAVPLRELKRLIRQRLGELRDMIGYDIAAMKVIARVAH-ERKLAMAPIQED 1030 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87132.16260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87132.16260.1 >prot_H-elongata_contig87132.16260.1 ID=prot_H-elongata_contig87132.16260.1|Name=mRNA_H-elongata_contig87132.16260.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=298bp QAWALEVSADGSFVLSGGHDRSLRIWRRTDEMVFLEEEREKELEGLFEAEback to top mRNA from alignment at H-elongata_contig87132:390..1815+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87132.16260.1 ID=mRNA_H-elongata_contig87132.16260.1|Name=mRNA_H-elongata_contig87132.16260.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1426bp|location=Sequence derived from alignment at H-elongata_contig87132:390..1815+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87132:390..1815+ >mRNA_H-elongata_contig87132.16260.1 ID=mRNA_H-elongata_contig87132.16260.1|Name=mRNA_H-elongata_contig87132.16260.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1788bp|location=Sequence derived from alignment at H-elongata_contig87132:390..1815+ (Himanthalia elongata Himel1 dioecious)back to top |