mRNA_H-elongata_contig87.16247.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Match: D8LNY1_ECTSI (Probable extracellular nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNY1_ECTSI) HSP 1 Score: 525 bits (1352), Expect = 2.000e-166 Identity = 440/1005 (43.78%), Postives = 585/1005 (58.21%), Query Frame = 1
Query: 40 LLTGGQVSAIYCNASVDEFVAHSVVNNTTGALLLAEAVHCMGGSFDVEWVGFVTLTAPIVVLENTTLNVNGLASSSSWIDGANQHQHFQIHGGTLKLSYLTLSRGTEYDGGSIYADRYSTIMIANCSFANNNAMIGGALLLSSSTLVMNDAXXXXXIAES--VGAIYADRYSDVTIANCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYADEYSAXXIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYADEYSAVMIANCSFANNNAAYRGALFLASSTFAINDAS-FYSNFAANSGGAIYAHHGADV---VVNGSAVWEANEARFGGAIRLYTMKAESETRVEITGEVTMSGNSAQSSGGAMYCVATAILNVYKTHFVSNYAGSSGGAATILSSGI---RGDYWSIISTTSFDDNTAGDAGGAIFIAGGFLSIKNSIXXXXXXXXXXXDIRSWGVATLSHCLLENNGAYTGPAILNALTISLSRTELDGNALLCDDG-YFLDFTNVSAYDTACYDCPPEANCEHCNVSNPDEVQVCEPVFAHTSSVRADGTLRSLNVQPGFWRSSFASKEVRECYEVEACVGGEDSYCAAGYMGPFCAVCTDGYARGLGHICNECSSERRNLIITIVVFMFVALVAVFLYGIRYRTSTSEAESVLPRQAYIMSQSPFKVARASQALKIVIVSWQIITQASASFATVASVTYPKVYDKFLKYIDVANLDLDWMLSTGCLVTTNFYVSLLVSTIGPLALASIVLMSYHVSIQRCRMDDEEAHARTKTRHGSILFWISFFFYTTVSSSIFHSFACDDIDDGKSYLRADHSLECYTTEHKYFMAYAGVMSIAYPFGIPFFYGLILHRHRATLQMEEAREAV-TNIVSFKDLWSPYRTEAYFYEVVECLRRVVLSGIVVFVFPNTAGQLATTFLFALFFFAVLMALNPYNNKWDSWLAKIGHAIVMMSMFVALLDKVDTSEDDMFR*EVFAGVLVAAN 3021
LL G + +A+ C +S VA SVV +T GAL LAEAV C G+F+V WVG V + I V + T L++ GL SS +DGA + F+++ G L+LS L+L GT GGSI+A S + ++ C F N A XXXXX+A+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +A GA+F + S ++ S F N A SGG ++ G+ + V +G A++ N GA T +++ V + G VA V F N A ++GGA ++S G G+Y + I +SF +N AG+ GGA++IAGGF+ S + + G A L C+L N A G A+ + ++ L ++ NALLCDD +FLD+TNVSAYD AC C E CE C + NPD+ +CE F +T S+ ADGTL SLN+ PG+WRSS S+++R C +C GG + CA GY G CA C + Y+ G G+ C+EC +RR V + VA + Y + +E ES R ++ + F + SQ KI+IVSWQI++Q FA+VASVTYP +Y F+ +ID +LD+ W LS C V TNFYV+LL TIGP+ ++ +VL S+ + + C DD + +R RH ++ ISF Y++VSS++F +F CDDID G+S+LR D+ ++C T EH+ +M YAG M + YP GIP Y L++ R + EE EA+ T+I + LW PYR Y+YEVVEC RRV LSG+V+F+ PNTAGQ+ T FL ++ FFA+ L+PY ++ D+WLA+IGHAIVMMS+FVA+ KVD + DD F +VFAG LVAAN
Sbjct: 14 LLAGRRSAAVPCASST--LVAPSVVEDTAGALGLAEAVDCSDGTFEVSWVGNVAVEQTIRVPDGTFLSIVGLPDGSSTVDGAGEVGLFEVNRGALQLSGLSLVNGTSAVGGSIFASD-SVVSVSECVFTGNAATQXXXXXXXXXXXXXXXXXXXXXVADGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADIGGAVFGSRSEVNVSGNSVFEDNIAGTSGGGVFLQSGSHLAFPVHDGGALFSGNRVEGAGAGVYVT----TDSTVSLEGPTXXXXXXXXXXXXXXXXVAVNDFRVENATFSFNSAQANGGAMALVSVGTAEANGEY-AQIRNSSFGENEAGNTGGAVYIAGGFVEFNRS-DFEGNTAGAGGALYAAGTAKLDDCVLSKNRAALGSAVSSVVSFVLQDSDFRDNALLCDDDRFFLDWTNVSAYDIACDQCDLE--CEGCTIMNPDKALLCEDAFPNTDSLTADGTLESLNLAPGYWRSSNKSRDIRACPRATSCPGGTEGSCAVGYDGTLCAECAEDYSLGPGYTCSECDEDRRKWTTAAAVILXVAAAVAVTVSVGYLGAPTE-ESAAARIPSLVRER-FGRSWVSQGFKIIIVSWQIVSQ----FASVASVTYPDLYATFVGFIDFLDLDVAWTLSVDCWVGTNFYVTLLTMTIGPVVVSVLVLGSWWIRTRHCPADDPDRFSRINQRHAKFIYLISFLVYSSVSSTVFQTFPCDDIDTGESFLRVDYRIQCSTAEHRGYMVYAGFMCLVYPIGIPVAYLFFLYKARKGFKSEE--EAMRTDIAVLRPLWQPYRQSVYYYEVVECFRRVTLSGLVIFILPNTAGQVMTGFLLSVAFFALFTVLDPYAHRRDTWLARIGHAIVMMSLFVAMAVKVDVTADDGFSQDVFAGALVAAN 999
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 399 bits (1026), Expect = 1.060e-114 Identity = 241/641 (37.60%), Postives = 366/641 (57.10%), Query Frame = 1
Query: 1144 NSAQSSGGAMYCVATAILNVYKTHFVSNYAGSSGGAATILSSGIR----GDYWSIISTTS--FDDNTAGDAGGAIFIAGGFLSIKNSIXXXXXXXXXXXDIRSWGVATLSHC-LLENNGAYTGPAILNALTISLSRTE-LDGNALLCDDGYFLDFTNVSAYDTACYDCPPEANCEHCNVSNPDEVQVCEPVFAHTSSVRADGTLRSLNVQPGFWRSSFASKEVRECYEVEACVGG---EDSYCAAGYMGPFCAVCTDGYARGLGHICNECSSERRNLIITIVVFMFV--ALVAVFLYGIRYRTSTSEAESVLPRQAYIMSQSPFKVARASQALKIVIVSWQIITQASASFATVASVTYPKVYDKFLKYIDVANLDLDWMLSTGCLVTTNFYVSLLVSTIGPLALASIVLMSYHVSIQRCRMDDEEAHARTKTRHGSILFWISFFFYTTVSSSIFHSFACDDIDDGKSYLRADHSLECYTTEHKYFMAYAGVMSIAYPFGIPFFYGLILHRHRATLQMEEA--REAVTNIVSFKDLWSPYRTEAYFYEVVECLRRVVLSGIVVFVFPNTAGQLATTFLFALFFFAVLMALNPYNNKWDSWLAKIGHAIVMMSMFVALLDKVDTSEDDMFR*EVFAGVLVAAN 3021
N+A + G M + +F +N A GGA +SSGI GD + F DN A GGAI A G+ NS+ +R G A L++C ++N GPA+ N + L T GN L C++G +LD + Y T C CP + +V N D V +C HT S D T+ +L + G+WR++ S V CY +ACVGG + ++C GY GP+C+VC++GY+ L C EC + + I +VV +FV A +A+ ++ + + V+ R ++ + P Q++KIV+V WQI+TQ F++VA+VTYP VY +FL +++ N D+ W+ S GCLV +F+ LLV+TIGPL +++ ++Y V+ +R E A + + +H S++ I+F Y++VS+++F SFAC+D+DD K YLRAD+ +EC ++EH+ F +AG+M + YP GIP FYG +L++HR L+ E+A R+ + DLW PY+ ++YEV+EC+RR+ L+G+VVF++PNTA Q+A T + A F + L PY +KWD+ ++ +GH IV SM+ ALL KVD S++ EVFAGVLVAA+
Sbjct: 1115 NTAGAGGAVMLSGVVIGPEFIQINFTANRA-PRGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEASVTGGAIETAAGYDFAINSVFEANAAGVGGA-LRLGGSAILTNCTFIDNTAEDEGPAVSNLGVLDLEGTSRFSGNVLSCENGMYLDSVDGDRYQTVCDGCPVNNSDWIVSVENGDRVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYEGPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCMHLVSGEMEGAR-RGVIHR---VVKRLPL------QSIKIVVVVWQILTQ----FSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVEVDFHGRLLVATIGPLVALALLAITYTVAKRRSS-GSEAALQKIRHKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAH 1738
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 386 bits (991), Expect = 3.540e-111 Identity = 231/652 (35.43%), Postives = 364/652 (55.83%), Query Frame = 1
Query: 1120 TGEVTMSGNSAQSSGGAMYCVATAILNVYK-THFVSNYAGSSGGAATILSSGIRGDYWSIISTTSFD-----DNTAGDAGGAIFIAGGFLSIKNSIXXXXXXXXXXXDIRSWGVATLSHCLLEN--NGAYTGPAILN-ALTISLSRTELDGNALLCDDGYFLDF--TNVSAYDTACYDCPPEANCEHCNVSNPDEVQVCEPVFAHTSSVRADGTLRSLNVQPGFWRSSFASKEVRECYEVEACVGGEDS---YCAAGYMGPFCAVCTDGYARGLGHICNECSSERRNLIITI---VVFMFVALVAVFLYGIRYRTSTSEAESVLPRQAYIMSQSPFKVARASQALKIVIVSWQIITQASASFATVASVTYPKVYDKFLKYIDVANLDLDWMLSTGCLVTTNFYVSLLVSTIGPLALASIVLMSYHVSIQRCRMDDEEAHARTKTRHGSILFWISFFFYTTVSSSIFHSFACDDIDDGKSYLRADHSLECYTTEHKYFMAYAGVMSIAYPFGIPFFYGLILHRHRATLQMEEA-REAVTNIVSFKDLWSPYRTEAYFYEVVECLRRVVLSGIVVFVFPNTAGQLATTFLFALFFFAVLMALNPYNNKWDSWLAKIGHAIVMMSMFVALLDKVDTSEDDMFR*EVFAGVLVAAN 3021
T +V+ +GNSA +GGA++ I + F+SN+A GGAA++ SG S I T FD DN A +GGA+ A G + NS+ +R G +G G A+ N L +++ + GN C FL++ T+ ++ C C C+ C+ P V C V H +S TL +L++ PG+WR++ +SKE+ CY +AC+GG YC Y GP+C++C+DGYA LG+ C++C S ++ + V+ +FVA+V + Y S E R+ Y++ + + V Q++KIVIVSWQI+TQ FA+ A+V YP VY +FL + V DL W++S GC++ F+ LL +TIGP+ A ++L + + R + E +H + ++F Y++VSS++F +FACD+++DGK+YLR D+ +EC +++HK F YAG M + YP GIP Y ++L + R L+ ++A R+ + S +LW PY+ ++YEV+EC RR++L+GIVVF++PNTA QLA T + A FF + A++PY+++W++W+ ++GH +V +SM+VALL KVD S++ VF VLV +
Sbjct: 758 TADVSFTGNSAGFAGGAVFVSGAGIGPTFSDVSFISNFA-QVGGAASVFGSGNDRGMLSPIIPTKFDRCRFIDNVATTSGGAVDSAAGQDIVVNSVFKGNSAEVGGA-LRLAGXXXXXXXXXXXXVSGRQEGAAVSNIGLVSTMANSSFTGNGFTCGPDLFLEYDATDNGTFEAVCDGC--RVACDGCSFDEPPAVPTCSDVMDHGTSTGGKVTLETLSIDPGYWRATSSSKEILPCYNADACLGGVTGTAGYCLESYEGPYCSICSDGYASNLGYSCSKCFSRSGGIVFAVGMAVLALFVAVVVIM-----YIMSGEAGE----RRMYVLERLGWYVPL--QSVKIVIVSWQILTQ----FASAANVVYPGVYQQFLDGLKVFGFDLGWLMSAGCVLDMGFHGRLLAATIGPI-FAVLLLAGTYAAATRINREANEKLRIIWDKHVFVFLLLTFLVYSSVSSTLFKTFACDELEDGKNYLRTDYRIECDSSKHKVFQVYAGFMILLYPLGIPMLYSILLFKDREVLKKDKADRDDSARVKSTSELWQPYKPSVFYYEVIECGRRILLTGIVVFIYPNTAAQLAITLMMAFFFALLSEAISPYSSRWETWVNRMGHVVVAVSMYVALLLKVDVSDERADSQSVFEAVLVTVH 1389
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 377 bits (968), Expect = 1.800e-110 Identity = 238/652 (36.50%), Postives = 358/652 (54.91%), Query Frame = 1
Query: 1120 TGEVTMSGNSAQSSGGAMYCVATAILNVYKTHFVSNYAGSSGGAATILSSGI--RGDYWSIISTT----SFDDNTAGDAGGAIFIAGGFLSIKNSIXXXXXXXXXXXDIRSWGVATLSHCLLENNGAYTGP--AILNALTIS-LSRTELDGNALLCDDGYFLDFTNVSAYDTACYDCPPEANCEHCNVSNPDEVQVCEPVFAHTSSVRADGTLRSLNVQPGFWRSSFASKEVRECYEVEACVGG---EDSYCAAGYMGPFCAVCTDGYARGLGHICNECSSERRNLIIT-----IVVFMFVALVAVFLYGIRYRTSTSEAESVLPRQAYIMSQSPFKVARASQALKIVIVSWQIITQASASFATVASVTYPKVYDKFLKYIDVANLDLDWMLSTGCLVTTNFYVSLLVSTIGPLALASIVLMSYHVSIQRCRMDDEEAHARTKTRHGSILFWISFFFYTTVSSSIFHSFACDDIDDGKSYLRADHSLECYTTEHKYFMAYAGVMSIAYPFGIPFFYGLILHRHRATLQME-EAREAVTNIVSFKDLWSPYRTEAYFYEVVECLRRVVLSGIVVFVFPNTAGQLATTFLFALFFFAVLMALNPYNNKWDSWLAKIGHAIVMMSMFVALLDKVDTSEDDMFR*EVFAGVLVAAN 3021
TGE + NSA +GGA+Y TAI + + + GGA + L SG G+ ++ TT F N A GGA+ A G ++++ +R G A+L +C N + G A+ N IS +S T GN C FL++T+ A D AC C + C+ C P V +C V H+ S TL +L++ PG+WR++ +S EV CY V+ACVGG YC GY GP+CA+C+D Y+ LG C++C + +++ I +F VA+V+ + + T + A ++ P Q LKI++V+WQI+TQ F + A+VTYP VY +FL +DV N D+ W+LS GC++ +F+ LL+STIGP+ +A + L + + + R + RH S++ + F Y+ VSS +F +FACD ++ G YLRAD+ +EC +++H+ F YAG M + YP GIP FYG +L R R L+ + + RE + S +LW PYR Y+YEV+EC RR++L+G+VVF++PNTA Q+A T + + F + AL PY WD+W++++ HA+V MS++VALL KVD S + +VF VLVAA+
Sbjct: 351 TGETSFVDNSANLAGGAVYVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGA-LRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFLNYTSGDALDEACSGC--QTTCDGC--VQPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYEGPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVVAVVSYVAWRVDPNTGCAMA-------GHLKRYLPL------QTLKILVVAWQIVTQ----FTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMDLDFHDRLLLSTIGPI-MALLFLAATYRAGSRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAH 979
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 380 bits (976), Expect = 9.900e-109 Identity = 246/678 (36.28%), Postives = 370/678 (54.57%), Query Frame = 1
Query: 1021 VNGSAVWEANEARF-GGAIRLYTMKAESETRVEITGEVTMSGNSAQSSGGAMYCVATAILNVYKTHFVSNYAGSSGGAATILSSGI--RGDYWSIISTTSFDDNTAGDAGGAIFIAGGFLSIKNSIXXXXXXXXXXXDIRSWGVATLSHCLLENNGAYTGP--AILNALTIS-LSRTELDGNALLCDDGYFLDFT-NVSAYDTACYDCPPEANCEHCNVSNPDEVQVCEPVFAHTSSVRADGTLRSLNVQPGFWRSSFASKEVRECYEVEACVGG---EDSYCAAGYMGPFCAVCTDGYARGLGHICNECSSERRNLIITIVVFMFVALVAVFLYGIRYRTSTSEAESVLPRQAYIMSQSPFKVARASQALKIVIVSWQIITQASASFATVASVTYPKVYDKFLKYIDVANLDLDWMLSTGCLVTTNFYVSLLVSTIGPLALASIVLMSYHVSIQRCRMDDEEAHARTKTRHGSILFWISFFFYTTVSSSIFHSFACDDIDDGKSYLRADHSLECYTTEHKYFMAYAGVMSIAYPFGIPFFYGLILHRHRATLQMEEA-REAVTNIVSFKDLWSPYRTEAYFYEVVECLRRVVLSGIVVFVFPNTAGQLATTFLFALFFFAVLMALNPYNNKWDSWLAKIGHAIVMMSMFVALLDKVDTSEDDMFR*EVFAGVLVAAN 3021
+NG+ ++ N A GG + L+ A + V+++ GNSA +G AM+ + +I + +I SG GD + T F N A GGAI A G +I+NS+ +R G A +S+C N + G A+ N IS ++ DGN C G F + T +V ++ C C E C+ C + +C V H++S + TL++L++ GFWR+S +S EV CY +AC+GG YC GY GP+C +C+DGY L C++CS I VV +AL+ VFL + + + E + R+ I+ + Q+LKIVIVSWQI+TQ F +VA+VTYP VY L +DV N DL W+LS GC+V NF+ LLVSTI P+ ++ +Y + + R + E+ + +H +++ ++FF Y++VSS++F +FACDD+D K YLRAD+S+EC ++EH+ YAG M + Y GIP Y +L + R L+ E+ RE + S +LW PY+ ++YEV+EC RRV+L+G+VVF++PNTA Q+A T L A F + L PY ++WD+W++++GH +V +SM+VALL KVD S++ EVF VLVA +
Sbjct: 815 INGTTIFSDNSAGGNGGGMALFVDVALNIGTVDVS----FLGNSAGVAGXAMFVSSVSIGPRFNXXXXXXXXXXXXXXISIFGSGTDESGDLPTTFDTCQFIGNQAISTGGAINSAAGEDAIENSVFEGNSAGTGGA-LRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFRNVTGSVDHFEAICNGC--ETTCDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYEGPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVV---LALLIVFL-AVAVVSYVTSGEVGMGRKGGIVELVTRYIPL--QSLKIVIVSWQILTQ----FTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCVVDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLNI-IWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVH 1474
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 370 bits (951), Expect = 4.610e-108 Identity = 232/646 (35.91%), Postives = 348/646 (53.87%), Query Frame = 1
Query: 1141 GNSAQSSGGAMYCVATAILNVYKTHFVSNYAGSSGGAATILSSGIR---GDYWSIISTTS---FDDNTAGDAGGAIFIAGGFLSIKNSIXXXXXXXXXXXDIRSWGVATLSHCLLENNGAYTG--PAILN-ALTISLSRTELDGNALLCDDGYFLDFTNVSA-YDTACYDCPPEANCEHCNVSNPDEVQVCEPVFAHTSSVRADGTLRSLNVQPGFWRSSFASKEVRECYEVEACVGG---EDSYCAAGYMGPFCAVCTDGYARGLGHICNECSSERRNLIITIVV-----FMFVALVAVFLYGIRYRTSTSEAESVLPRQAYIMSQSPFKVARASQALKIVIVSWQIITQASASFATVASVTYPKVYDKFLKYIDVANLDLDWMLSTGCLVTTNFYVSLLVSTIGPLALASIVLMSYHVSIQRCRMDDEEAHARTKTRHGSILFWISFFFYTTVSSSIFHSFACDDIDDGKSYLRADHSLECYTTEHKYFMAYAGVMSIAYPFGIPFFYGLILHRHRATLQMEEA-REAVTNIVSFKDLWSPYRTEAYFYEVVECLRRVVLSGIVVFVFPNTAGQLATTFLFALFFFAVLMALNPYNNKWDSWLAKIGHAIVMMSMFVALLDKVDTSEDDMFR*EVFAGVLVAAN 3021
GN+A +GGA++ TA+ + + + + GGA +++ SG DY +T F N A GGA+ A G NS+ +R G A +++C N + G A+ N S+S N C +G FL+ Y+ C CP E CE C+ P V C H++S TL +L ++PG+WR++ +S+ V ECY +AC+GG +SYC GY GP+CAVC+ GY LG C++CS ++ + + V VALV+ + G S A V+ R + Q++KIVIV+WQI+TQ F +VA++ +P VY +FL +++ N DL W+LS GC+ +F+ LLVSTI P+ + Y + + E+ R +H S++ ++F Y +VS+ +F +FAC+++DD K+YLRAD+ +EC + +H F YAG M + Y GIP YG L R L+ +EA RE + I DLW PYR ++YEV+EC RRV+L+G+VVF++PNTA Q+A L A+ F + AL PY ++WD+WL ++GHA+V +SM+VALL KVD S++ VF +LVAA+
Sbjct: 315 GNTAAVAGGAIFVSGTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGA-LRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEESGTLYEAICDGCPVE--CEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYEGPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFTVALVSYAVSG----ESEGRARGVVERTGRFVPL---------QSVKIVIVAWQILTQ----FTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFDVDFHDRLLVSTIAPIVGLLFLAAVYAAAARNSHRSSEDLQ-RVWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAH 939
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE) HSP 1 Score: 367 bits (941), Expect = 1.370e-105 Identity = 251/730 (34.38%), Postives = 375/730 (51.37%), Query Frame = 1
Query: 907 GALFLASST--FAINDASFYSNFAANSGGAIYA--HHGADVVVNGSAVWEANEARF-GGAIRLYTMKAESETRVEITGEVTMSGNSAQSSGGAMYCVATAILNVYKTHFVSNYAGSSGGAATILSSGIRGDYWSIISTT----SFDDNTAGDAGGAIFIAGGFLSIKNSIXXXXXXXXXXXDIRSWGVATLSHC-LLENNGAYTGPAILNALTISLSRTELDGNALLCDDGYFLDFT-----NVSAYDTACYDCPPEANCEHCNVSNPDEVQVCEPVFAHTSSVRADGTLRSLNVQPGFWRSSFASKEVRECYEVEACVGGE---DSYCAAGYMGPFCAVCTDGYARGLGHICNECSSERRNLIITIVVFMFVALVAVFLYGIRYRTSTSEAE-SVLPRQAYIMSQSPFKVARASQALKIVIVSWQIITQASASFATVASVTYPKVYDKFLKYIDVANLDLDWMLSTGCLVTTN--FYVSLLVSTIGPLALASIVLMSYHVSIQRCRMDDEEAHARTKT---RHGSILFWISFFFYTTVSSSIFHSFACDDIDDGKSYLRADHSLECYTTEHKYFMAYAGVMSIAYPFGIPFFYGLILHRHRATLQMEEAREAVTNIVSFKDLWSPYRTEAYFYEVVECLRRVVLSGIVVFVFPNTAGQLATTFLFALFFFAVLMALNPYNNKWDSWLAKIGHAIVMMSMFVALLDKVDTSEDDMFR*EVFAGVLVAANC 3024
GA+F+ +S ++ + +F N A + GGA+YA H + + W A GGA+ LY A S + V I+G+VT + NSA +GG ++ A ++ + + GGA +G GD + + + F N A + GG + A G + +S ++ G + C + N+ + G AI +++S T +GN C G F++ + YDT C+DCP + C C+V C +T S A +L +L++ G+WR+S +S + CY EAC+GG+ D+ C GY GP+CAVC GYA L H C +CSS RRN + V + S +E S L R+ + + P Q+ KI+IV WQI+TQ FA+ A++++P VY F+ +DV N DL ++++GC N F+ LLVST+GPL + + +Y V+ +R + A + +H S ++F Y++VS+++F FACD +DDG +YLRAD+ + C + +H+ YA M YP GIP Y +LH R L A +A S DLW PYR E ++YEV+EC RRV+L+G+VVF++PNTA Q+A T L A FF V L PY + D WL++ GH IV +SMF LL KVD S++ VFAGV+VA +C
Sbjct: 405 GAMFVWASEVLWSAGNTTFAHNLAYDDGGALYATLDHRIECSGGRTTFWNNTAAAGDGGALGLYGSMALSSSVVNISGDVTFTNNSAFGNGGGVFSSANTAGQYFEGVTFQYNSAAVGGAVATYGTG-NGDEVTPVPASFVGCRFMSNAATETGGGVESAFGQENFVSS-HFQDNYADVGGALQLGGKTNVDGCAFVANSASSRGLAIAAVGFVNISDTLFEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECYSCSVQEAAGRPTCSVALDNTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQGPYCAVCESGYASSLAHTCTQCSSSRRNGFVVAAAIAVVXXXXXXXXXCAHLISGEVSEQSCLHRR--LSAMLPL------QSFKIIIVVWQILTQ----FASAANISFPDVYQDFINALDVVNFDLGSLVASGCWADINVDFHDRLLVSTLGPLLVVGGLASTYAVAQRRNSSASGGSQAGVEAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHHRRDVLMDPTADKASAQ--STADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHC 1118
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 363 bits (931), Expect = 4.350e-105 Identity = 238/685 (34.74%), Postives = 365/685 (53.28%), Query Frame = 1
Query: 1009 ADVVVNGSAVWEANEAR-FGGAIRLYTMKAESETRVEITGEVTMSGNSAQSSGGAMYCVATAI-LNVYKTHFVSNYAGSSGGAATILSSGIRGDYWSIISTTS----FDDNTAGDAGGAIFIAGGFLSIKNSIXXXXXXXXXXXDIRSWGVATLSHCLLENNGAYT---GPAILNALTISLSRTELDGNALLCDDGYFLDF--TNVSAYDTACYDCPPEANCEHCNVSNPDEVQVCEPVFAHTSSVRADGTLRSLNVQPGFWRSSFASKEVRECYEVEACVGG---EDSYCAAGYMGPFCAVCTDGYARGLGHICNECSSERRNLIITIVVFMFVALVAVFLYGIRYRTSTSEAESVLPRQAYIMSQSPFKVARASQALKIVIVSWQIITQASASFATVASVTYPKVYDKFLKYIDVANLDLDWMLSTGCLVTTNFYVSLLVSTIGPLALASIVLMSYHVSIQRCRMDDEEAHARTKTRHGSILFWISFFFYTTVSSSIFHSFACDDIDDGKSYLRADHSLECYTTEHKYFMAYAGVMSIAYPFGIPFFYGLILHRHRATLQMEEAREAVTNIVSFKDLWSPYRTEAYFYEVVECLRRVVLSGIVVFVFPNTAGQLATTFLFALFFFAVLMALNPYNNKWDSWLAKIGHAIVMMSMFVALLDKVDTSEDDMFR*EVFAGVLVAAN 3021
A +VVNGS + N GGAI K + + +V +GNSAQS GGA+Y TA+ + F N A +GGA + +SG+ + TT F DN A +GGAI + G SI++S + ++ +C + N A T GPA+ N + + + N + C G F+D+ + Y+ C CP + V N V C +T S A+ ++ + + PG+WR++ + V CY +AC+GG E YC GY GP+CA+CT+ Y R + C +CSS V +FV+ +AV + ++E E ++ + KV+ S LKIV+V WQI+TQ F+ VA+VTYP +Y +FL IDV N D+ W++S GC+V +F+ LL +TIGP+ + ++ +Y + R R DE A AR +H S + ++F Y++VSS++F F CD + D SYLRAD+S++C +T+H+ +A M + YP GIP FYG++L+ R L+ R+A + LW PY + Y+ EVVEC RR++L+G+VVF++PN+A Q+A + L F + L P+ + WD W+++ GH ++ ++MFVALL KVD S++ +FAG+LV N
Sbjct: 343 ASLVVNGSTAFVDNTCEGSGGAI-----KTSGAVSLALE-DVVFTGNSAQSRGGALYISNTAVGPTLVGLTFTGNTA-HTGGAVYVTASGVDAVFGDGYPTTFAGCYFADNFADLSGGAIDSSSGDDSIESSDFISNKAVIGGALRLAGNDVSIKYCTFDGNAAGTVDGGPAVSNVGDLDVWNSVFRRNYIECPPGSFVDYYESEGGRYEAVCDGCPAADDGITMGVEN--LVPTCTETLENTRSDGANTSIEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGYYGPYCAICTENYGRTMAFECTKCSSGEG----VAVGVIFVSALAVGGAALVAYLVSNEREGXXXXXLIVLVKD--KVSFRS--LKIVVVVWQILTQ----FSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCVVDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGSDE-AIARVFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALKDGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTN 1005
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 360 bits (923), Expect = 1.020e-103 Identity = 219/586 (37.37%), Postives = 320/586 (54.61%), Query Frame = 1
Query: 1312 FDDNTAGDAGGAIFIAGGFLSIKNSIXXXXXXXXXXXDIRSWGVATLSHC-LLENNGAYTGPAILNALTISLSRTELDGNALLCDDGYFLDFTN---VSAYDTACYDCPPEANCEHCNVSNPDEVQVCEPVFAHTSSVRADGTLRSLNVQPGFWRSSFASKEVRECYEVEACVGGE---DSYCAAGYMGPF-----CAVCTDGYARGLGHICNECSSERRNLIITIVVFMFVALVAVFLYG--IRYRTSTSEAESVLPRQAYIMSQSPFKVARASQALKIVIVSWQIITQASASFATVASVTYPKVYDKFLKYIDVANLDLDWMLSTGCL-VTTNFYVSLLVSTIGPLALASIVLMSYHVSIQRCRMDDEEAHA-RTKTRHGSILFWISFFFYTTVSSSIFHSFACDDIDDGKSYLRADHSLECYTTEHKYFMAYAGVMSIAYPFGIPFFYGLILHRHRATLQMEEAREAVTNIVSFKDLWSPYRTEAYFYEVVECLRRVVLSGIVVFVFPNTAGQLATTFLFALFFFAVLMALNPYNNKWDSWLAKIGHAIVMMSMFVALLDKVDTSEDDMFR*EVFAGVLVAAN 3021
FD+ +G GGA+ G S +R G + +C L N+ G AI ++S D N L C+ G + + T + ++T C DCP C+ C+V+ CE HT++V TL +L++ G+WR++ S ++ CY +AC GG+ DS+CA+GYMGP C+VC G+A L H C CSS RR ++ + V ALVAVF +Y ST E A + + Q LKI++V WQI+TQ FA VA++TYP+ Y FL IDV N DL L+ GCL +F+ LL+ T+GPL ++M+Y V+++R + A T+ +H S L ++F Y++VSS++F +FAC+ +DDG YLR D+++ C +HK F YAG+M + YP GIP Y ++L + R L A + V ++ LW PYR E ++YEV+EC RR++L+G+V F+FPN A Q+A T L A FF V ++PY ++ D+WL++ GH IV +SMF ALL KVD S + +VFAGV VA +
Sbjct: 450 FDNKASGGTGGAVETLSGRQEFI-SCDFEGNSAYVGGAMRLGGTVDVRNCSFLSNSATSRGLAIAVVAFANISGASFDRNELYCEAGLYREDTEGEPSARFETVCLDCP---ECDDCHVTRSSVTPACELPLEHTTAVEPGLTLETLDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGPCEEGEDCSVCETGFAPSLAHTCTRCSSSRRQGLLAVAVI--AALVAVFAIVTIFKYLLSTEVDEG----NAGCFHRRILRAVPV-QTLKIIVVVWQILTQ----FADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQTPADNTRHKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVLGDARADKTVAQPIA--GLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGH 1018
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 363 bits (931), Expect = 1.110e-103 Identity = 249/693 (35.93%), Postives = 366/693 (52.81%), Query Frame = 1
Query: 1000 HHGADVVVNGSAVWEANEARF-GGAIRLYTMKAESETRVEI-TGEVTMSGNSAQSSGGAMYCVATAILNVYK-THFVSNYAGSSGGAATILSSGIRGDY-WSIISTTSFD-----DNTAGDAGGAIFIAGGFLSIKNSIXXXXXXXXXXXDIRSWGVATLSHCLLENNGA--YTGPAILN-ALTISLSRTELDGNALLCDDGYFLDFT-NVSAYDTACYDCPPEANCEHCNVSNPDEVQVCEPVFAHTSSVRADGTLRSLNVQPGFWRSSFASKEVRECYEVEACVGG---EDSYCAAGYMGPFCAVCTDGYARGLGHICNECSSERRNLIITIVVFMFVALVA--VFLYGIRYRTSTSEAESVLPRQAYIMSQSPFKVARASQALKIVIVSWQIITQASASFATVASVTYPKVYDKFLKYIDVANLDLDWMLSTGCLVTTNFYVSLLVSTIGPLALASIVLMSYHVSIQRCRMDDEEAHARTKTRHGSILFWISFFFYTTVSSSIFHSFACDDIDDGKSYLRADHSLECYTTEHKYFMAYAGVMSIAYPFGIPFFYGLILHRHRATLQMEEA-REAVTNIVSFKDLWSPYRTEAYFYEVVECLRRVVLSGIVVFVFPNTAGQLATTFLFALFFFAVLMALNPYNNKWDSWLAKIGHAIVMMSMFVALLDKVDTSEDDMFR*EVFAGVLVAAN 3021
+ G+ +V+NG+ + N GGA+ L A V I T V+ GN+A+ +GGA++ T ++ F+SN A G +T+ S ++ + S + T+FD DN A GGAI A G + NS +R G A+L C +N + G A+ N +S+ GN CD G +LD+ + + Y+ AC C E C+ C P C V H +S TL L V+ G+WR+S +S+EV CY +AC+GG YC GY GP+CAVC+DGY L C CS + + V+ + V VA V Y + R + V YI QS +KIVIV+WQI+TQ F +VA+VTYP VY +FL +DV N DL W+LS GC+ +F+ LL ST+ P+ + +Y ++ R E +H S++ ++F Y++VS+++F +F C++++DG +YLRAD++++C +++HK F YAG M + Y GIP Y +L R R L+ A RE S DLW PY+ ++YEV+EC RRV+L+G+VVF+FPNTA Q+A T + A F V L P+ +KWD+WL + GH +V +SM++ALL KVD S + V+ VLVAA+
Sbjct: 550 NQGSTLVMNGTTAFVNNTCGANGGALALLGGLA-----VNIGTENVSFIGNAAEVAGGAVFVSGTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGG-LRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDYNASGNPYEAACGGC--ETACDGC-FFEPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYEGPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAFAVASYAMSGRVGDVRSGVVARLGQYIPLQS----------VKIVIVAWQILTQ----FTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFDIDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNRGKAESLQV-IWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAH 1218 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig87.16247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig87.16247.1 >prot_H-elongata_contig87.16247.1 ID=prot_H-elongata_contig87.16247.1|Name=mRNA_H-elongata_contig87.16247.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=993bp MMALLGCYIMLLTGGQVSAIYCNASVDEFVAHSVVNNTTGALLLAEAVHCback to top mRNA from alignment at H-elongata_contig87:13785..18514+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig87.16247.1 ID=mRNA_H-elongata_contig87.16247.1|Name=mRNA_H-elongata_contig87.16247.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4730bp|location=Sequence derived from alignment at H-elongata_contig87:13785..18514+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig87:13785..18514+ >mRNA_H-elongata_contig87.16247.1 ID=mRNA_H-elongata_contig87.16247.1|Name=mRNA_H-elongata_contig87.16247.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=5958bp|location=Sequence derived from alignment at H-elongata_contig87:13785..18514+ (Himanthalia elongata Himel1 dioecious)back to top |