mRNA_H-elongata_contig8675.16235.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8675.16235.1
Unique NamemRNA_H-elongata_contig8675.16235.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
[Close]
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Match: A0A6H5JZI7_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZI7_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 3.050e-48
Identity = 92/152 (60.53%), Postives = 105/152 (69.08%), Query Frame = 2 
Query:    8 DMQTLLDLHNEARCKHNADSLAYSETVESTAQAYAEVLASDCGS-FEHSAAADRNYYGENLYMCWGASGCYSPEYAMAQLYDAEVEADDVLEYGGHATQILWKSTTKLGCAVESCTLDGVPYEILVCHYDPAGNIIGQYEEEVELP-SDESC 457
            DM  L+DLHNEARC HNAD L +S TV S+A  +AE L + C S   HS    R  YGENLYMCWG+  CYS E AM  LY  EV++D VL+YGGHATQILWKST ++GC V  CT  G PY  LVC YDP GN  GQYEE+V LP S +SC
Sbjct:  240 DMTELVDLHNEARCVHNADPLTWSSTVASSAAEHAERLTAQCSSNLFHSTQEQRYGYGENLYMCWGSDSCYSHERAMEGLYYDEVQSDSVLQYGGHATQILWKSTEQVGCVVARCTNGGTPYMFLVCQYDPPGNYGGQYEEQVGLPDSGKSC 391
[Close]
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Match: D8LJX3_ECTSI (Pathogenesis-related protein, class 1 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX3_ECTSI)

HSP 1 Score: 177 bits (449), Expect = 1.380e-46
Identity = 91/152 (59.87%), Postives = 104/152 (68.42%), Query Frame = 2 
Query:    8 DMQTLLDLHNEARCKHNADSLAYSETVESTAQAYAEVLASDCGS-FEHSAAADRNYYGENLYMCWGASGCYSPEYAMAQLYDAEVEADDVLEYGGHATQILWKSTTKLGCAVESCTLDGVPYEILVCHYDPAGNIIGQYEEEVELP-SDESC 457
            DM  L+DLHNEARC HNAD L +S TV S+A  +AE L + C S   HS    R  YGENLYMCWG+  CYS E AM  LY  EV+ D VL+YGGHATQILWK+T ++GC V  CT  G PY  LVC YDP GN  GQYEE+V LP S +SC
Sbjct:  341 DMTELVDLHNEARCVHNADPLTWSSTVASSAAEHAERLTAQCSSSLFHSTQEQRYGYGENLYMCWGSDSCYSHEKAMEGLYYDEVQFDSVLQYGGHATQILWKATEQVGCVVARCTNGGTPYTFLVCQYDPPGNYGGQYEEQVGLPDSGKSC 492
[Close]
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Match: A0A6H5KK50_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK50_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 1.220e-43
Identity = 85/153 (55.56%), Postives = 100/153 (65.36%), Query Frame = 2 
Query:    5 DDMQTLLDLHNEARCKHNADSLAYSETVESTAQAYAEVLASDC-GSFEHSAAADRNYYGENLYMCWGASGCYSPEYAMAQLYDAEVEADDVLEYGGHATQILWKSTTKLGCAVESCTLDGVPYEILVCHYDPAGNIIG--QYEEEVELPSDES 454
            DDM  LLDLHNEARC H AD L +S+ V S+A  +A  L   C  S  HS    R  YGENL+MCWG   CY+ EYAM +LY  EV+   V +Y GHATQILWKST K+GC +  CT  G PY  LVC YDPAGN+ G  +Y EEV LP+ E+
Sbjct:   78 DDMTGLLDLHNEARCVHGADPLGWSDPVTSSAAEHAARLTDQCTSSLFHSTTDQRYGYGENLFMCWGTDTCYNHEYAMEKLYVEEVQFGAVTDYIGHATQILWKSTKKVGCVLAQCTNGGTPYTFLVCQYDPAGNMGGDKEYIEEVGLPNPEN 230
[Close]
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Match: D8LJW7_ECTSI (Pathogenesis-related protein, class 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW7_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 9.600e-42
Identity = 83/155 (53.55%), Postives = 101/155 (65.16%), Query Frame = 2 
Query:    5 DDMQTLLDLHNEARCKHNADSLAYSETVESTAQAYAEVLASDC-GSFEHSAAADRNYYGENLYMCWGASGCYSPEYAMAQLYDAEVEADDVLEYGGHATQILWKSTTKLGCAVESCTLDGVPYEILVCHYDPAGNIIG--QYEEEVELPS-DESC 457
            DDM  LLDLHNEARC H+AD L +S+ V S+A  +A  L   C  S  HS    R  YGENL++CWG   CY+ +YAM  LY  EV+ DDV +Y GHATQILWKST  +GC +  C+  G PY  LVC YDPAGN+ G  +Y +EV LP  + SC
Sbjct:  165 DDMAGLLDLHNEARCVHSADPLGWSDPVTSSAAEHAVRLTDQCTSSLFHSTREQRYGYGENLFVCWGTDTCYNHDYAMEHLYVEEVQFDDVTDYIGHATQILWKSTKNVGCVLAGCSNGGTPYTFLVCQYDPAGNMGGDDEYRQEVGLPDPNNSC 319
[Close]
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Match: A0A6H5JCL1_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCL1_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.130e-34
Identity = 75/145 (51.72%), Postives = 93/145 (64.14%), Query Frame = 2 
Query:   29 LHNEARCKHNADSLAYSETVESTAQAYAEVLASDC-GSFEHSAAADRNYYGENLYMCWGASGCYSPEYAMAQLYDAEVEADDVLEYGGHATQILWKSTTKLGCAVESCTLDGVPYEILVCHYDPAGNIIGQYEEEVELP-SDESC 457
            L+  + C HNAD L +S TV S+A  +AE L + C  S  HS    R  YG NLY+ WG+  CYS + A   LY  EV++D VL+YGGHATQILWK+  ++GCA   CT  G P+  LVC YDP GN  GQYEE+V LP S +SC
Sbjct:  223 LYTTSWCVHNADPLTWSSTVASSAAEHAEGLTAQCFSSLFHSTQEQRYGYGANLYIRWGSDSCYSHKKATKGLYYDEVQSDSVLQYGGHATQILWKAAEQVGCAGARCTNGGTPHAFLVCQYDPPGNSGGQYEEQVGLPDSRKSC 367
[Close]
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Match: A0A6H5KE93_9PHAE (SCP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE93_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 4.740e-29
Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 2 
Query:    5 DDMQTLLDLHNEARCKHNADSLAYSETVESTAQAYAEVLASD--CGSFEHSAAADRNYYGENLYMCWGASG----------CYSPEYAMAQLYDAEVEADDVLEYGGHATQILWKSTTKLGCAVESCTLDGVPYEILVCHYDP-AGNIIGQYEEEVELPSDESC 457
            D +  LL+LHN ARC H    L ++E V +TA+ YA+VLAS+  CGS E   AA     GEN+++C  +S           C+SPE AM   YD++V       YG +ATQ+LWKSTT++GCA+ +C  +G+ Y+ILVC Y P AG    + E  +E  S  +C
Sbjct:   82 DPLDRLLELHNAARCMHATGPLEFAEPVAATAKTYADVLASESMCGSAE---AAHSTGLGENVFVCAASSSFSGNGAPTSACFSPEIAMEAFYDSQVGGGSTSTYGPYATQVLWKSTTQIGCALRACEKEGLTYDILVCRYSPPAGEDATESEVALEANSKTTC 242
[Close]
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Match: D8LQY8_ECTSI (SCP-domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQY8_ECTSI)

HSP 1 Score: 121 bits (303), Expect = 6.970e-28
Identity = 69/164 (42.07%), Postives = 95/164 (57.93%), Query Frame = 2 
Query:    5 DDMQTLLDLHNEARCKHNADSLAYSETVESTAQAYAEVLASD--CGSFEHSAAADRNYYGENLYMCWGASG----------CYSPEYAMAQLYDAEVEADDVLEYGGHATQILWKSTTKLGCAVESCTLDGVPYEILVCHYDP-AGNIIGQYEEEVELPSDESC 457
            D +  LL+LHN ARC H    L ++E V +TA+ YA++LAS+  CGS E    A     GEN+++C  +S           C+SPE AM   YD++V       YG  ATQ+LWKSTT++GCA+ +C  DG+ Y+ILVC Y P AG    + E  +E  S  +C
Sbjct:   99 DPLDRLLELHNAARCMHATGPLEFAEPVAATAKTYADLLASESMCGSAE---TAHSTGLGENVFVCAASSSLSGDGAPTAACFSPESAMEAFYDSQVGGGPTSTYGPRATQVLWKSTTQIGCALRACEKDGLTYDILVCRYSPPAGEDTTESEVALEANSKTTC 259
[Close]
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Match: D8LED1_ECTSI (PR1-like metalloprotease n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED1_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 2.500e-27
Identity = 72/154 (46.75%), Postives = 93/154 (60.39%), Query Frame = 2 
Query:   14 QTLLDLHNEARCKHNADSLAYSETVESTAQAYAEVLAS--DCGSFEHSAAADRNYYGENLYMCWGASGCYSPEYAMAQLYDAEVEADDVLEYGGHATQILWKSTTKLGCAVESCTLDGVPYEILVCHYDPAGNI--IGQYEEEVELP--SDESC 457
            Q LLDLHNEARC H A+ LA+ ET+E TA+ +AE L S  +CG    S      Y GENLY+C+GA+ C   +  +  +YD  V+   V EY   A ++LW STTKLGCA+ SC    +  E+LVC+YDP G+       E EV LP  S+E C
Sbjct:   96 QVLLDLHNEARCVHGAEPLAWDETMEETARGHAEELTSRQNCGYLFWSDVTAHGY-GENLYLCYGAADCMMYDGVLDTMYDYAVDDGPVTEYDIRARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDPIGDYGDPAAIEVEVGLPEQSEEEC 248
[Close]
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Match: D7G7J6_ECTSI (Putative zinc metalloendopeptidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J6_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 2.640e-27
Identity = 72/154 (46.75%), Postives = 93/154 (60.39%), Query Frame = 2 
Query:   14 QTLLDLHNEARCKHNADSLAYSETVESTAQAYAEVLAS--DCGSFEHSAAADRNYYGENLYMCWGASGCYSPEYAMAQLYDAEVEADDVLEYGGHATQILWKSTTKLGCAVESCTLDGVPYEILVCHYDPAGNI--IGQYEEEVELP--SDESC 457
            Q LLDLHNEARC H A+ LA+ ET+E TA+ +AE L S  +CG    S      Y GENLY+C+GA+ C   +  +  +YD  V+   V EY   A ++LW STTKLGCA+ SC    +  E+LVC+YDP G+       E EV LP  S+E C
Sbjct:  248 QVLLDLHNEARCVHGAEPLAWDETMEETARGHAEELTSRQNCGYLFWSDVTAHGY-GENLYLCYGAADCMMYDGVLDTMYDYAVDDGPVTEYDIRARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDPIGDYGDPAAIEVEVGLPEQSEEEC 400
[Close]
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Match: D8LED3_ECTSI (WSC domain protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LED3_ECTSI)

HSP 1 Score: 125 bits (313), Expect = 4.410e-27
Identity = 72/154 (46.75%), Postives = 93/154 (60.39%), Query Frame = 2 
Query:   14 QTLLDLHNEARCKHNADSLAYSETVESTAQAYAEVLAS--DCGSFEHSAAADRNYYGENLYMCWGASGCYSPEYAMAQLYDAEVEADDVLEYGGHATQILWKSTTKLGCAVESCTLDGVPYEILVCHYDPAGNI--IGQYEEEVELP--SDESC 457
            Q LLDLHNEARC H A+ LA+ ET+E TA+ +AE L S  +CG    S      Y GENLY+C+GA+ C   +  +  +YD  V+   V EY   A ++LW STTKLGCA+ SC    +  E+LVC+YDP G+       E EV LP  S+E C
Sbjct:  116 QVLLDLHNEARCVHGAEPLAWDETMEETARDHAEELTSRQNCGYLFWSDVTAHGY-GENLYLCYGAADCMMYDGVLDTMYDYAVDDGPVTEYDIRARRMLWASTTKLGCAISSCVYQYIDVEVLVCNYDPIGDYGDPAAIEVEVGLPEQSEEEC 268
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8675.16235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZI7_9PHAE3.050e-4860.53SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJX3_ECTSI1.380e-4659.87Pathogenesis-related protein, class 1 n=3 Tax=Ecto... [more]
A0A6H5KK50_9PHAE1.220e-4355.56SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LJW7_ECTSI9.600e-4253.55Pathogenesis-related protein, class 1 n=1 Tax=Ecto... [more]
A0A6H5JCL1_9PHAE1.130e-3451.72SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KE93_9PHAE4.740e-2942.68SCP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LQY8_ECTSI6.970e-2842.07SCP-domain containing protein n=1 Tax=Ectocarpus s... [more]
D8LED1_ECTSI2.500e-2746.75PR1-like metalloprotease n=2 Tax=Ectocarpus silicu... [more]
D7G7J6_ECTSI2.640e-2746.75Putative zinc metalloendopeptidase n=1 Tax=Ectocar... [more]
D8LED3_ECTSI4.410e-2746.75WSC domain protein n=3 Tax=Ectocarpus TaxID=2879 R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8675contigH-elongata_contig8675:2155..6507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorymitochondrion
Exons6
Model size1357
Cds size702
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8675.16235.1prot_H-elongata_contig8675.16235.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8675 2160..5847 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931268.757846-UTR-H-elongata_contig8675:2154..21591622931268.757846-UTR-H-elongata_contig8675:2154..2159Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8675 2155..2159 +
1691679767.0040672-UTR-H-elongata_contig8675:2154..21591691679767.0040672-UTR-H-elongata_contig8675:2154..2159Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8675 2155..2159 +
1622931269.1222203-UTR-H-elongata_contig8675:5847..62071622931269.1222203-UTR-H-elongata_contig8675:5847..6207Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8675 5848..6207 +
1691679767.0740583-UTR-H-elongata_contig8675:5847..62071691679767.0740583-UTR-H-elongata_contig8675:5847..6207Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8675 5848..6207 +
1622931269.139215-UTR-H-elongata_contig8675:6217..65071622931269.139215-UTR-H-elongata_contig8675:6217..6507Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8675 6218..6507 +
1691679767.0888488-UTR-H-elongata_contig8675:6217..65071691679767.0888488-UTR-H-elongata_contig8675:6217..6507Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8675 6218..6507 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931269.0344174-CDS-H-elongata_contig8675:2159..21991622931269.0344174-CDS-H-elongata_contig8675:2159..2199Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8675 2160..2199 +
1691679767.014103-CDS-H-elongata_contig8675:2159..21991691679767.014103-CDS-H-elongata_contig8675:2159..2199Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8675 2160..2199 +
1622931269.0550344-CDS-H-elongata_contig8675:2418..24761622931269.0550344-CDS-H-elongata_contig8675:2418..2476Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8675 2419..2476 +
1691679767.0232935-CDS-H-elongata_contig8675:2418..24761691679767.0232935-CDS-H-elongata_contig8675:2418..2476Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8675 2419..2476 +
1622931269.0718417-CDS-H-elongata_contig8675:4747..48891622931269.0718417-CDS-H-elongata_contig8675:4747..4889Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8675 4748..4889 +
1691679767.032841-CDS-H-elongata_contig8675:4747..48891691679767.032841-CDS-H-elongata_contig8675:4747..4889Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8675 4748..4889 +
1622931269.090124-CDS-H-elongata_contig8675:5131..52851622931269.090124-CDS-H-elongata_contig8675:5131..5285Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8675 5132..5285 +
1691679767.0427587-CDS-H-elongata_contig8675:5131..52851691679767.0427587-CDS-H-elongata_contig8675:5131..5285Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8675 5132..5285 +
1622931269.106831-CDS-H-elongata_contig8675:5539..58471622931269.106831-CDS-H-elongata_contig8675:5539..5847Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8675 5540..5847 +
1691679767.055107-CDS-H-elongata_contig8675:5539..58471691679767.055107-CDS-H-elongata_contig8675:5539..5847Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8675 5540..5847 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8675.16235.1

>prot_H-elongata_contig8675.16235.1 ID=prot_H-elongata_contig8675.16235.1|Name=mRNA_H-elongata_contig8675.16235.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=234bp
MTCRLYSICTTKLGASTTPTLWHTVKLWSQQLRPTPRYSLRTADPLNTAL
PRTATTTVKTCICAGVPAAATRLNMLWLSYMMRRSRLMMSWNMEDTRPKF
CGSPLLSWAARWSRVPWMAYRTKSLSATTTPRATSSGNTKRKWSSRPTNR
AKAAQQLWLQICSFNRSNGIPCEGRGTVTALFIWKLESDHERRLVLSGRR
SYSVHNIMGVITVKNDRASGLCHGVWRTSFGGR*
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mRNA from alignment at H-elongata_contig8675:2155..6507+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8675.16235.1 ID=mRNA_H-elongata_contig8675.16235.1|Name=mRNA_H-elongata_contig8675.16235.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4353bp|location=Sequence derived from alignment at H-elongata_contig8675:2155..6507+ (Himanthalia elongata Himel1 dioecious)
GACTGATGACATGCAGACTTTACTCGATCTGCACAACGAAGCTAGGTGAG
CTGCCATTACTAAATAGACACAATATCGGGTGCAGAATGCCTTGACATGT
ATCATAAGATGCCGAAATGAGGCGCGAACAATAAGCAGAACGTTAAACGA
AATGCGGCCGCAGATAGGAGTAGGTATGTATGTGGTTGGTTTACAGAGAG
AACCTTCCGTGGAGTGATCACGCCACTTGGTCTCACTTTATTAAATTCGT
GGTTACCATTCCAGGTGCAAGCACAACGCCGACTCTCTGGCATACAGTGA
AACTGTGGAGTCAACAGCTCAGGTGAGCTTCAAATGAAGCCCTCTATCTA
CGGTTCGTGGCTCCTTTGTTGTAATCTAGATTATTTCAGCCTACTATTTA
TACGTTGATATCCGAACTTACCTCATTATATGTTGAGCAATCAACGATAC
CAGGCGATTGCTCAATCCCGGATTGGCTGCAGCTATTATGTGCCACCAGA
TATTACGGGCCCGCAAAGCCTTAATCTTAGCTGTACATCTCCATAGCTGA
AATCAATCCGGCATAGATCAGGCCCCAAGTCCATCGTGTAAGCGCTAATG
ATTTCTCGTGGGGACAACAAATTATTCTCAAATAGCTTCGATGGAGCGGG
TGGAAAAGTTATGACATATTGTTTCGCATCCTTGCGAAGTTAGAGAGATC
GCCATCATGATATTCTAAGCTCTATCCACTCCAGAGTGTTACCGCCCGCG
GCAGAGATGCCATCAAGATACCGCTGATAATGTAGATAGTACCAAATACG
CGAAGACGCGGATCATTTTTTAGTCCTTGCTTTCGTAGGCCTTCATACCG
CCTTCGCCACAACCAATCACTCTTCTTGCTACCAACCCTTTATTTCATCC
ACCCTGTCTGTAATACTGCACTTCTATCCGTCCTCTCGACAGGCCTAACG
GCCATTTCACAAATCCTTGAGCTCGCTGTTCTCATCTACAGCCGGCCGCA
TGATGCCTTATCGACAGCGACAGAAGGCTCCGGAGTCTAAAGCACAAAAT
GACCCCATGCGATCTGAAAGTTCAAACACGTTTATTGCGTATTACCAATG
ACTTGGCTGACTGTGTTCTGCTTTGCGTATGCAGCACTATTTTCTTGCGC
TCGATGTTCGGCGTGGTGGTCGCGTGCAGTGTGATGTCGTGTGCTCGGAA
GCCAACATCCGTTTGACTTTTGGAATTAGAACGAAAAATCTCGGAGGAAT
AGGCGGAAACGTATGGTGAGCCAAAGTCATTCTTACTTTTGAGAGACATT
AACGGGTATCCGTTCAGATTTCGGTTTTCGCACACACTTTTTGGTCAAAT
TTGGATTTTTTGTTTTTGTTTCGTTTCAAAACCCAAATCGAAATATTATT
TTGAATCGCAAACGCCCTAGTAATAGTCGATTGTTGTTGTATGTTATGAC
ATACCTTTGTCGAAAGGCGCAATATGCCCGCGGGGTGGCTTACGCTACTG
ATGACATTATTTTTGGCCGTAGTTCTGCGATAAGATCATCGTCACCGATG
TACCGTGAACCACAAAAAAGAGATATCGAATATTACAAATACAAATCAGC
AGAAAACACTAAACGACGTCAGCCTATCTATGATCGATATTGTTGGGCGA
GCTCGTTTATCGCCTGCGACCTTTCTCGTCAGCCCCGAGCTTCGATTAGT
ATTTTTGTTTTGTAGTACAGATATCACACCGTACGCTCGTGTGTAGAGTT
CGAATCATCATTACTTTTAGGTAGTAAAACATACATTACAAATAGCAGGC
GTTGTTTATATTTGCTTACGTACTCCCTCATAATTTCACGCACCCTGGCT
TGTATTTCACCCCGGAGGGCGAGCCTTGGAGTTAGCACCCATTCTCGTCC
ACCCTCCCTGAGAATCGCTCCTCCTGACCTCAGGTCTCGCAATTTGGTCA
ATAATGTCAACCCCTCGGCTTTGATAAATTATAGGGGGCATTCCCGAGTT
GAAATATTATTGAACCATTTCTTCCTTGTCCCGACAATAAGGTGCAAGCT
CAAACGGTTTAAGACATCAAATAATGTGTCGGGGATGTACAAGTACTCAA
AGCTGATTGAAAATCGGAATATATGACGCATTCACACAGCCTGTCTAATT
AACAGGAGAAGGACGCGCCCTTTTGGCCGAGTTAAAACTCCACGACGGGT
GGGTGGGATCGGTGTGGACGAGACCGATCGGCTTTAAATGTGGCAATCAA
ATAATCAACCTAATAACGGTCGATCCTTCGCTATCGGGAGAAAGAAAATT
CCAATCATGACATGAAGAGGTGCAGAAGTGGCGAACTTGCATCACTATAA
ACTATAAACAGCCGCTGGCGTAAACCGGAAACAGATCAGCTGACCCGTCA
GCAATTCAGGCGGGATTCATTCTTAGTTTGCTATAGTTCAAGGGCACAGT
GGCAGAGAGTGAGGATCAATAAAGCTAAAGTAAACTACAGTAGTAGCCAT
GAAATAGATGAAATCTGGTTTCGATTTGAGCTTACTGTCTATTAGTGAAG
ATTATCTCACCCCATACACGATGCATGATTATTTCTCGTCCAGGCCTACG
CCGAGGTACTCGCTTCGGACTGCGGATCCTTTGAACACAGCGCTGCCGCG
GACCGCAACTACTACGGTGAAAACCTGTATATGTGCTGGGGTGCCAGCGG
CTGCTACTCGCCTGAATATGCTATGGCTCAGCTATGTAAGTAATTTCTAT
CAAATCTACTCAAGGATCTTGTTTCACGGTTAATATACCTCAAATGTATT
CCTTGATGACTTCGCTCTCCCCGTTCTGCGTGCTTTGAGCTTAAATAATA
TAACCCATACTGTAGCTACCCCACGAAGTTTAAGGACTTCGTTTCGGTGG
GGGATATATCTAACCGTTGACCTTATGGCGTCCTGTTGACCGTCTGCACC
ACTGGTGACTTCAACCTTAACTCTCAGATGATGCGGAGGTCGAGGCTGAT
GATGTCTTGGAATATGGAGGACACGCGACCCAAATTTTGTGGAAGTCCAC
TACTAAGCTGGGCTGCGCGGTGGAGTCGTGTACCCTGGATGGCGTACCGT
ACGAAATCCTTGTCTGCCACTACGACCCCGCGTAAGCAAATAAACGATCT
TGGTCTCAACAGTACTAAATGTATGTTTACCATGTTCGTACGATGCTTGG
AGCTAGGTCCCCAATCATGTGAGAGTAGCGATTATTGCATTTCAAAGTAC
GGTAAAGGGTCGAACTTTGAGTAGCGATTATTCTAATGACTGAAAGCTAC
CCTGGTGGATGACGCGGAAGCAACTTACATAACCGTTTAAAGTTTGTCTA
AGATTCTCCATTTTTTCTCGCGTTAATCAACCCAGGGGCAACATCATCGG
GCAATACGAAGAGGAAGTGGAGCTCCCGTCCGACGAATCGTGCTAAAGCT
GCGCAACAACTATGGCTTCAAATTTGTAGCTTTAACCGCTCAAACGGCAT
CCCTTGCGAGGGACGCGGAACCGTGACCGCCTTGTTCATCTGGAAACTTG
AATCTGATCATGAACGCCGTTTAGTTCTGTCTGGGCGCAGGAGCTACAGT
GTCCACAACATAATGGGCGTGATCACTGTGAAAAATGATCGGGCGAGCGG
GCTTTGTCACGGTGTATGGAGGACCAGCTTTGGCGGACGTTAGCTCTTCT
CAATTTTGTGGCCTTTGCGCAAATTTGCCACGTGTATGCACGACAGATCA
AGCGATAAGCGTGACTTCAGCTTGAATCTGCGTAGTTGACTAATAACATA
TTATTTGGAGGAATAAATGCCTTTCCTACAAAGTGAATTTGCTTGCGCAG
TACCGCCCGTTTCATTATCTGGGCGTGGGCTCTATACATGGTTTTATATA
GCCTGGAATTATTTCTCTGCTTCCGTGCGTCACGGAGATATATTCACTAT
ATGCTCCCGATGAAATGCATGCAAAGCGATAGTGTTCCTTCGCACAAACT
CAAGCTCTCGTTTGTTGATGGATCAGCGTGGAGCCTACATGGCTTGAACC
TCAGCGTGAGGAGATTCAGGGCCAAGGCAGTCGTTTTGAATCTATTGCAT
GTATTTCGTCATTTGTTTTCTTTGTGTTTTGCCGAAATACTTCATCCATG
ATAGTTTAGTGCCTGTCAACAGCGTATGGCTAGAGCGTTGCACGTTATCC
TCTTCAACAACTGTGACAGCTGAAGATATCTATGCTTGGCGTCCGCACAA
TGTTTCATGTTCGTGTTCTCGGGGTACCGCGAAGAGAGGGTGCTATGTAT
TCGTGGCTTCATATTTATAGATGTCTTGAGGCAGTGCTTCCGAGGAGTGC
GGT
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Coding sequence (CDS) from alignment at H-elongata_contig8675:2155..6507+

>mRNA_H-elongata_contig8675.16235.1 ID=mRNA_H-elongata_contig8675.16235.1|Name=mRNA_H-elongata_contig8675.16235.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1404bp|location=Sequence derived from alignment at H-elongata_contig8675:2155..6507+ (Himanthalia elongata Himel1 dioecious)
ATGACATGCAGACTTTACTCGATCTGCACAACGAAGCTAGATGACATGCA
GACTTTACTCGATCTGCACAACGAAGCTAGGTGCAAGCACAACGCCGACT
CTCTGGCATACAGTGAAACTGTGGAGTCAACAGCTCAGGTGCAAGCACAA
CGCCGACTCTCTGGCATACAGTGAAACTGTGGAGTCAACAGCTCAGGCCT
ACGCCGAGGTACTCGCTTCGGACTGCGGATCCTTTGAACACAGCGCTGCC
GCGGACCGCAACTACTACGGTGAAAACCTGTATATGTGCTGGGGTGCCAG
CGGCTGCTACTCGCCTGAATATGCTATGGCTCAGCTATGCCTACGCCGAG
GTACTCGCTTCGGACTGCGGATCCTTTGAACACAGCGCTGCCGCGGACCG
CAACTACTACGGTGAAAACCTGTATATGTGCTGGGGTGCCAGCGGCTGCT
ACTCGCCTGAATATGCTATGGCTCAGCTATATGATGCGGAGGTCGAGGCT
GATGATGTCTTGGAATATGGAGGACACGCGACCCAAATTTTGTGGAAGTC
CACTACTAAGCTGGGCTGCGCGGTGGAGTCGTGTACCCTGGATGGCGTAC
CGTACGAAATCCTTGTCTGCCACTACGACCCCGCATGATGCGGAGGTCGA
GGCTGATGATGTCTTGGAATATGGAGGACACGCGACCCAAATTTTGTGGA
AGTCCACTACTAAGCTGGGCTGCGCGGTGGAGTCGTGTACCCTGGATGGC
GTACCGTACGAAATCCTTGTCTGCCACTACGACCCCGCGGGCAACATCAT
CGGGCAATACGAAGAGGAAGTGGAGCTCCCGTCCGACGAATCGTGCTAAA
GCTGCGCAACAACTATGGCTTCAAATTTGTAGCTTTAACCGCTCAAACGG
CATCCCTTGCGAGGGACGCGGAACCGTGACCGCCTTGTTCATCTGGAAAC
TTGAATCTGATCATGAACGCCGTTTAGTTCTGTCTGGGCGCAGGAGCTAC
AGTGTCCACAACATAATGGGCGTGATCACTGTGAAAAATGATCGGGCGAG
CGGGCTTTGTCACGGTGTATGGAGGACCAGCTTTGGCGGACGTTAGGGGC
AACATCATCGGGCAATACGAAGAGGAAGTGGAGCTCCCGTCCGACGAATC
GTGCTAAAGCTGCGCAACAACTATGGCTTCAAATTTGTAGCTTTAACCGC
TCAAACGGCATCCCTTGCGAGGGACGCGGAACCGTGACCGCCTTGTTCAT
CTGGAAACTTGAATCTGATCATGAACGCCGTTTAGTTCTGTCTGGGCGCA
GGAGCTACAGTGTCCACAACATAATGGGCGTGATCACTGTGAAAAATGAT
CGGGCGAGCGGGCTTTGTCACGGTGTATGGAGGACCAGCTTTGGCGGACG
TTAG
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