mRNA_H-elongata_contig86666.16224.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Match: A0A6H5JUD9_9PHAE (Methionine synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUD9_9PHAE) HSP 1 Score: 466 bits (1199), Expect = 1.220e-158 Identity = 229/264 (86.74%), Postives = 243/264 (92.05%), Query Frame = 1
Query: 7 IFKDVEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAKAAVFAVREYLDEHDLTDIPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCRPFCLGLNCALGATQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAEEELINMLGGCCGSTPAHIKA-----------MKEAIAHCSTRALPPPREPFMWLSGLEDLVVTKERFQFLNVGERCNVAGSIRFKKLILSGDYQTAMDVAKKQV 765
I DVEDPSFRNVTFDELV AYKDQTKGLIDGG+DIIIVETIFDTLNAKAAVFAVREY +E +TD+PLFVSGTLVDQSGRTLSGQTTEGFYVSMRHC+PFC+GLNCALGA+QMRPFLQRLA+VAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFA+E LINMLGGCCGSTPAHIKA MK+A+ CSTRALPPPREPFMWLSGLEDL+VTKERFQFLNVGERCNV+GSIRFKKLIL GDYQTAMDVAK+QV
Sbjct: 184 ISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGGADIIIVETIFDTLNAKAAVFAVREYFEEQGITDVPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCKPFCVGLNCALGASQMRPFLQRLAQVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAQEGLINMLGGCCGSTPAHIKARRKGRAEKKRAMKDAVEPCSTRALPPPREPFMWLSGLEDLIVTKERFQFLNVGERCNVSGSIRFKKLILKGDYQTAMDVAKQQV 447
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Match: D7FUT0_ECTSI (Methionine synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT0_ECTSI) HSP 1 Score: 476 bits (1225), Expect = 8.280e-157 Identity = 230/253 (90.91%), Postives = 242/253 (95.65%), Query Frame = 1
Query: 7 IFKDVEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAKAAVFAVREYLDEHDLTDIPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCRPFCLGLNCALGATQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAEEELINMLGGCCGSTPAHIKAMKEAIAHCSTRALPPPREPFMWLSGLEDLVVTKERFQFLNVGERCNVAGSIRFKKLILSGDYQTAMDVAKKQV 765
I DVEDPSFRNVTFDELV AYKDQTKGLIDGG+DIIIVETIFDTLNAKA VFAVREY DE +TD+PLFVSGTLVDQSGRTLSGQTTEGFYVSMRHC+PFC+GLNCALGA+QMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYD+TPEDMARDNLLFAEE LINMLGGCCGSTPAHIKAMK+A+ CSTRALPPPREPFMWLSGLEDL+VTKERFQFLNVGERCNV+GSIRFKKLIL GDYQTAMDVAK+QV
Sbjct: 102 ISPDVEDPSFRNVTFDELVVAYKDQTKGLIDGGADIIIVETIFDTLNAKAGVFAVREYFDEQGITDVPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCKPFCIGLNCALGASQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDETPEDMARDNLLFAEEGLINMLGGCCGSTPAHIKAMKDAVEPCSTRALPPPREPFMWLSGLEDLIVTKERFQFLNVGERCNVSGSIRFKKLILKGDYQTAMDVAKQQV 354
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Match: A0A7S2XWE9_9STRA (Methionine synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWE9_9STRA) HSP 1 Score: 408 bits (1049), Expect = 1.530e-130 Identity = 194/253 (76.68%), Postives = 223/253 (88.14%), Query Frame = 1
Query: 7 IFKDVEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAKAAVFAVREYLDEHDLTDIPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCRPFCLGLNCALGATQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAEEELINMLGGCCGSTPAHIKAMKEAIAHCSTRALPPPREPFMWLSGLEDLVVTKERFQFLNVGERCNVAGSIRFKKLILSGDYQTAMDVAKKQV 765
I +VEDPS RNVTFDEL AY +Q GL++GG DI++VETIFDTLNAKAAVFA +L+EH L D+PLFVSGTLVDQSGRTLSGQTTE FYVS+RHC+PFC+GLNCALGATQM+PFL+RLA VAECFVHVYSNAGLPNAMGGYDDTP+DMAR+NL+FA+E+L+NM+GGCCGSTP HIKA+ EA+ R LP +EP +WLSGLEDLVV+K+RF FLNVGERCN+AGSIRFKKLIL GDY TAMD+AKKQV
Sbjct: 165 ISPNVEDPSVRNVTFDELEIAYYEQVCGLVEGGCDILMVETIFDTLNAKAAVFACNRFLEEHGLEDMPLFVSGTLVDQSGRTLSGQTTEAFYVSIRHCKPFCVGLNCALGATQMKPFLRRLAVVAECFVHVYSNAGLPNAMGGYDDTPDDMARENLIFADEKLVNMIGGCCGSTPPHIKAISEAVKGMPPRPLPEKKEPVLWLSGLEDLVVSKDRFTFLNVGERCNIAGSIRFKKLILGGDYATAMDIAKKQV 417
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Match: H3HA59_PHYRM (Methionine synthase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HA59_PHYRM) HSP 1 Score: 365 bits (938), Expect = 1.270e-120 Identity = 178/253 (70.36%), Postives = 209/253 (82.61%), Query Frame = 1
Query: 7 IFKDVEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAKAAVFAVREYLDEHDLTDIPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCRPFCLGLNCALGATQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAEEELINMLGGCCGSTPAHIKAMKEAIAHCSTRALPPPREPFMWLSGLEDLVVTKERFQFLNVGERCNVAGSIRFKKLILSGDYQTAMDVAKKQV 765
I +VEDP FRNVTFDELV AY Q +GL+DGGSD+++VETIFDTLNAKAAVFA+ +Y E +PLF+SGT+VD SGRTLSGQTTE FYVS+RH +PFC+GLNCALGA QM+PFLQRLA VAECFV VY+NAGLPNAMGGYDDTP MA F+++ LINM+GGCCG+TP HI+A+ A R LP +EPFMWLSGLED+VVTKERF FLNVGERCN++GSIRFK+LI+ GDY TAMDVA++QV
Sbjct: 163 ISPNVEDPGFRNVTFDELVDAYYTQVEGLVDGGSDVLLVETIFDTLNAKAAVFAINKY-QETTGRKLPLFISGTIVDMSGRTLSGQTTEAFYVSLRHSKPFCIGLNCALGANQMKPFLQRLANVAECFVSVYANAGLPNAMGGYDDTPAMMAEYCEEFSKDRLINMMGGCCGTTPQHIEAIAIMAAKYEPRPLPELKEPFMWLSGLEDMVVTKERFSFLNVGERCNISGSIRFKRLIMKGDYGTAMDVARQQV 414
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Match: A0A836CPG7_9STRA (Methionine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPG7_9STRA) HSP 1 Score: 381 bits (978), Expect = 3.180e-120 Identity = 186/250 (74.40%), Postives = 212/250 (84.80%), Query Frame = 1
Query: 19 VEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAKAAVFAVREYLDEHDLTDIPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCRPFCLGLNCALGATQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAEEELINMLGGCCGSTPAHIKAMKEAIAHCSTRALPPPREP-FMWLSGLEDLVVTKERFQFLNVGERCNVAGSIRFKKLILSGDYQTAMDVAKKQV 765
VEDPS+RNV FDELV AY + K L++GGSDIIIVETIFDTLNAKAAVFAVR+YL E + DIPL +SGTLVDQSGRTLSGQT EGFYVSMRH +PFC+GLNCALGA QM+PFL+RL+ VAECFVHVYSNAGLPNAMGGYDDTP DMARDN FA E ++NM+GGCCGSTP HIKAM E + C+ R LP P +P MWLSGLE L V+K+R FLNVGERCN +GSI+FKKLI++G+Y +AMDVAK QV
Sbjct: 170 VEDPSYRNVNFDELVDAYYFEAKALVEGGSDIIIVETIFDTLNAKAAVFAVRKYLRETNQEDIPLMISGTLVDQSGRTLSGQTGEGFYVSMRHVKPFCIGLNCALGAQQMKPFLRRLSMVAECFVHVYSNAGLPNAMGGYDDTPSDMARDNHEFASEGMVNMIGGCCGSTPQHIKAMHEDVKDCAPRPLPKPLDPPVMWLSGLEPLQVSKDRINFLNVGERCNCSGSIQFKKLIMAGNYSSAMDVAKAQV 419
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Match: A0A7S1UDH7_9STRA (Methionine synthase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDH7_9STRA) HSP 1 Score: 376 bits (966), Expect = 2.940e-119 Identity = 183/254 (72.05%), Postives = 212/254 (83.46%), Query Frame = 1
Query: 7 IFKDVEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAKAAVFAVREYLDEHDLTDIPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCRPFCLGLNCALGATQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAEEELINMLGGCCGSTPAHIKAMKEAIAHCSTRALPPPREPF-MWLSGLEDLVVTKERFQFLNVGERCNVAGSIRFKKLILSGDYQTAMDVAKKQV 765
I DVEDPS RN FDELV AY DQ K L+DGGSD ++VETIFDTLNAKAA+FA+ YLDE D+P+FVSGTLVDQSGRTLSGQT E FYVS+RH +PFC+GLNCALGA QM+PFL+RL+ VAECFVHVY+NAGLPNAMGGYDDTPEDMAR+NL+FA E LINM+GGCCGSTP HI A+ EA+A R L + +WLSGLEDLVV+KERFQF+N+GERCN+AGS +FK+LI+ GDY +AMDVAK QV
Sbjct: 52 ISPDVEDPSCRNCDFDELVKAYYDQAKALMDGGSDALMVETIFDTLNAKAALFAIDNYLDEIYPRDVPVFVSGTLVDQSGRTLSGQTNEAFYVSIRHAKPFCVGLNCALGADQMKPFLRRLSNVAECFVHVYANAGLPNAMGGYDDTPEDMARENLIFANERLINMIGGCCGSTPPHIAAIAEAVASHEPRVLKGKNDKMELWLSGLEDLVVSKERFQFMNIGERCNLAGSAKFKRLIMGGDYGSAMDVAKAQV 305
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Match: A0A8K1C6F4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C6F4_PYTOL) HSP 1 Score: 371 bits (953), Expect = 1.370e-116 Identity = 178/253 (70.36%), Postives = 213/253 (84.19%), Query Frame = 1
Query: 7 IFKDVEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAKAAVFAVREYLDEHDLTDIPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCRPFCLGLNCALGATQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAEEELINMLGGCCGSTPAHIKAMKEAIAHCSTRALPPPREPFMWLSGLEDLVVTKERFQFLNVGERCNVAGSIRFKKLILSGDYQTAMDVAKKQV 765
I +VEDP FRNVTFDELV AY Q +GL+DGGSDI++VETIFDTLNAKAAV+A+ +Y E+ +PLF+SGT+VD SGRTLSGQTTE FYVS+RH +PFC+GLNCALGA QM+PFLQRL+ VAECFV VY+NAGLPNAMGGYDD+P+ MA F ++ LINM+GGCCG+TP HI+AM E + + R LPP ++PFMWLSGLEDLVVTKERF FLN+GERCN++GSIRFKKLIL GDY TAMD+A++QV
Sbjct: 165 ISPNVEDPGFRNVTFDELVAAYYQQVEGLVDGGSDILLVETIFDTLNAKAAVYAIDQY-QENTGRRLPLFISGTIVDMSGRTLSGQTTEAFYVSLRHSKPFCIGLNCALGANQMKPFLQRLSNVAECFVSVYANAGLPNAMGGYDDSPQLMADHCEEFCKDYLINMMGGCCGTTPKHIRAMAEMTMNYTARPLPPLKDPFMWLSGLEDLVVTKERFSFLNIGERCNISGSIRFKKLILKGDYGTAMDIARQQV 416
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Match: K3WL46_GLOUD (Methionine synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL46_GLOUD) HSP 1 Score: 371 bits (953), Expect = 1.420e-116 Identity = 180/253 (71.15%), Postives = 211/253 (83.40%), Query Frame = 1
Query: 7 IFKDVEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAKAAVFAVREYLDEHDLTDIPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCRPFCLGLNCALGATQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAEEELINMLGGCCGSTPAHIKAMKEAIAHCSTRALPPPREPFMWLSGLEDLVVTKERFQFLNVGERCNVAGSIRFKKLILSGDYQTAMDVAKKQV 765
I +VEDP FRNVTFDELV AY Q +GL+DGGSDI++VETIFDTLNAKAAV+AV Y E +PLF+SGT+VD SGRTLSGQTTE FYVS+RH +PFC+GLNCALGA QM+PFLQRL+ VAECFV VY+NAGLPNAMGGYDD P MA F +++LINM+GGCCG+TPAHIKA+ + + R LPPP++PFMWLSGLEDLVVTKERF FLNVGERCN++GSIRFKKLI+ GDY TAMD+A++QV
Sbjct: 168 ISPNVEDPGFRNVTFDELVEAYYTQIEGLVDGGSDILLVETIFDTLNAKAAVYAVDVY-QEKTGKKLPLFISGTIVDMSGRTLSGQTTEAFYVSLRHSKPFCIGLNCALGANQMKPFLQRLSNVAECFVSVYANAGLPNAMGGYDDGPALMAEYCEEFCKDQLINMMGGCCGTTPAHIKAIADVCGKYAPRPLPPPKDPFMWLSGLEDLVVTKERFSFLNVGERCNISGSIRFKKLIMKGDYGTAMDIARQQV 419
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Match: A0A2D4BEJ2_PYTIN (Methionine synthase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BEJ2_PYTIN) HSP 1 Score: 369 bits (946), Expect = 7.710e-116 Identity = 179/253 (70.75%), Postives = 210/253 (83.00%), Query Frame = 1
Query: 7 IFKDVEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAKAAVFAVREYLDEHDLTDIPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCRPFCLGLNCALGATQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAEEELINMLGGCCGSTPAHIKAMKEAIAHCSTRALPPPREPFMWLSGLEDLVVTKERFQFLNVGERCNVAGSIRFKKLILSGDYQTAMDVAKKQV 765
I +VEDP FRNVTFDELV AY Q +GL+DGGSD+++VETIFDTLNAKAAVFA+ +Y E +PLF+SGT+VD SGRTLSGQTTE FYVS+RH +PFC+GLNCALGA QM+PFLQRLA VAECFV VY+NAGLPNAMGGYDD P MA+ F E++LINM+GGCCG+TP HI+A+ + + R LP P+ PFMWLSGLEDLVVTKERF FLNVGERCN++GSIRFKKLIL GDY TAMD+A++QV
Sbjct: 145 ISPNVEDPGFRNVTFDELVDAYYTQVEGLVDGGSDVLLVETIFDTLNAKAAVFAIDKY-QEATGRRLPLFISGTIVDMSGRTLSGQTTEAFYVSLRHSKPFCIGLNCALGANQMKPFLQRLANVAECFVSVYANAGLPNAMGGYDDNPVLMAKYCEEFCEDKLINMIGGCCGTTPVHIRAIADMTERHAPRPLPSPQAPFMWLSGLEDLVVTKERFSFLNVGERCNISGSIRFKKLILKGDYGTAMDIARQQV 396
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Match: A0A7S4DBJ3_HETAK (Methionine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBJ3_HETAK) HSP 1 Score: 369 bits (947), Expect = 9.850e-116 Identity = 178/249 (71.49%), Postives = 204/249 (81.93%), Query Frame = 1
Query: 19 VEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAKAAVFAVREYLDEHDLTDIPLFVSGTLVDQSGRTLSGQTTEGFYVSMRHCRPFCLGLNCALGATQMRPFLQRLAKVAECFVHVYSNAGLPNAMGGYDDTPEDMARDNLLFAEEELINMLGGCCGSTPAHIKAMKEAIAHCSTRALPPPREPFMWLSGLEDLVVTKERFQFLNVGERCNVAGSIRFKKLILSGDYQTAMDVAKKQV 765
VED S RNVTFDEL AY QT L++GGSD+IIVETIFDTLNAKAA+FAV Y +E T+ PLF+SGTLVDQSGRTLSGQT E FY S+RH +PFC+GLNCALGA QM+PFL+RLA V ECFVHVYSNAGLPNAMGGYDDTPEDMAR+N +FA E L+NM+GGCCGSTP HI A+ + R LP EP MWLSGLEDL+V+K+RF FLNVGERCN+AGSI FKK I++GDY AM++AKKQV
Sbjct: 172 VEDASQRNVTFDELEAAYYQQTVKLMEGGSDVIIVETIFDTLNAKAAIFAVNRYFEETGNTETPLFISGTLVDQSGRTLSGQTGEAFYASVRHAKPFCVGLNCALGAAQMKPFLRRLANVVECFVHVYSNAGLPNAMGGYDDTPEDMARENHIFASERLVNMIGGCCGSTPPHIAAIAADVEGMPPRELPTLGEPTMWLSGLEDLIVSKDRFSFLNVGERCNLAGSILFKKKIMAGDYMAAMEIAKKQV 420 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86666.16224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig86666.16224.1 >prot_H-elongata_contig86666.16224.1 ID=prot_H-elongata_contig86666.16224.1|Name=mRNA_H-elongata_contig86666.16224.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=260bp SDIFKDVEDPSFRNVTFDELVTAYKDQTKGLIDGGSDIIIVETIFDTLNAback to top mRNA from alignment at H-elongata_contig86666:236..2457+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig86666.16224.1 ID=mRNA_H-elongata_contig86666.16224.1|Name=mRNA_H-elongata_contig86666.16224.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2222bp|location=Sequence derived from alignment at H-elongata_contig86666:236..2457+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig86666:236..2457+ >mRNA_H-elongata_contig86666.16224.1 ID=mRNA_H-elongata_contig86666.16224.1|Name=mRNA_H-elongata_contig86666.16224.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1560bp|location=Sequence derived from alignment at H-elongata_contig86666:236..2457+ (Himanthalia elongata Himel1 dioecious)back to top |