mRNA_H-elongata_contig8650.16213.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig8650.16213.1
Unique NamemRNA_H-elongata_contig8650.16213.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438IJY3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438IJY3_VITVI)

HSP 1 Score: 132 bits (333), Expect = 2.610e-32
Identity = 74/196 (37.76%), Postives = 112/196 (57.14%), Query Frame = 1
Query:    1 EPTTMGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLEAKGFQKVDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 588
            +P ++ + + SS+  +W  A+  EM      GVW +VE PKG  ++G + +FK K D  G I + K  LVA+GF Q +GI Y+E FSP  ++ S R++  ++        VD C++ +   GT  +++V+YVDD+L+AS+      +  R L S F +KDLG  S+ LG  I RDR+ G L+  Q  YI  V  RF
Sbjct:  747 DPISVSQVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVELPKGVKLIGCKWIFKIKRDSKGNIVRYKAHLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALE------NTVDQCIYLK-FSGTKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILRLSQKAYIDKVLSRF 935          
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A6H5JVD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVD4_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 5.620e-32
Identity = 74/209 (35.41%), Postives = 115/209 (55.02%), Query Frame = 1
Query:   49 WKRAIAREMNGQTARGVWQVVE-CPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIK------------------------LEAKGFQ--KVDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERFDV 594
            W+RA++ E  G    G +  V+  P+G+  + +R  F  K +K+G++E  K RLVA+GF Q+  + Y    SP P+ ASI+++  +                         L   GF+  K DPC+FR+++   VV++IV+YVDD+LVA + + D E+ +  L   F  K+LG+  ++ GC I RD  AGTL+  Q  YI ++ ERFDV
Sbjct:   15 WERAMSEEFEGHLGTGTFSFVDGAPEGRRPVSSRWCFSWKTNKEGKVENFKARLVARGFSQIPNVDYFHSSSPGPSSASIKLMLAVADEKGINLNHWDVKQAQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDV 222          
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438FXS9_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FXS9_VITVI)

HSP 1 Score: 122 bits (305), Expect = 1.390e-28
Identity = 71/211 (33.65%), Postives = 114/211 (54.03%), Query Frame = 1
Query:    1 EPTTMGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFG-------------IKLEAKGFQKVDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERFDV 594
            +P T  EA +S +  +W  A+  EM   +   VW++V+ PKG   +G + VFK K D  G +E+CK RLVA+G+ Q +GI + E FSP   +   R+V               +K+      K + C++ ++ +G+  + +V+Y+DD+L+AS+         R L + F +KDLG+ S+ LG  I RDR+   L   Q  YI  V +RF++
Sbjct:  407 DPNTYCEALSSDKANEWLIAMRDEMQSMSDNDVWELVDLPKGYKPIGCKWVFKTKRDNKGNVERCKARLVARGYTQREGIDFTETFSPVSTKDYFRLVMALVAHFDLELHQMDVKIAFLNENKFNQCVYMKV-NGSKYIFMVLYIDDILLASSNVNLLNDTKRILSANFDMKDLGEASFVLGIEIYRDRSRNLLGLSQIAYINRVLKRFNM 616          
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438FNN4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FNN4_VITVI)

HSP 1 Score: 116 bits (291), Expect = 1.070e-26
Identity = 71/209 (33.97%), Postives = 108/209 (51.67%), Query Frame = 1
Query:    1 EPTTMGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVF-------------GIKLEAKGFQKVDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 588
            +P ++ + + SS+  +W  A+  EM      GVW +VE P+G   +G + +FK K D  G I + K RLVA+ F Q + I Y+E FSP  ++ S R++               +K        +D C++ +   G+  +++V+YVDD+L+AS+      +  R L S F +KDLG  S  LG  I RDR+ G L   Q  YI  V  RF
Sbjct:  483 DPISVSQVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVELPEGVKSIGCKWIFKTKWDSKGNIVRYKARLVAKVFTQKEDIDYKETFSPVSSKDSFRIIMTLVAHYDLELHQMDVKTVFLNENTIDQCIYLK-FSGSKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASLVLGIQIHRDRSRGILGLSQKAYIDKVLSRF 690          
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A5BKE8_VITVI (Integrase catalytic domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5BKE8_VITVI)

HSP 1 Score: 116 bits (291), Expect = 1.090e-26
Identity = 71/200 (35.50%), Postives = 108/200 (54.00%), Query Frame = 1
Query:   52 KRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLEAK-----------------GFQK--VDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERFDV 594
            K+A+  EMN     GVW +VE P G  ++G + VFK K D   +IE+ K RLV +G+ Q +GI ++E FSP   + S R++  +K   K                 GF+   V+ C++ R+  G+  + +V+YVDD+L+AS       +    L + F +KDLG+ SY LG  I RDR  G LK  Q  YI+ + + F++
Sbjct:  617 KQAMDDEMNSMYMNGVWDLVELPHGCKLVGCKWVFKTKRDSSEKIERYKARLVVKGYSQREGIDFKETFSPVSTKDSFRVIMAVKPSLKQALRQWYLKFDRIITQNGFKDNTVERCIYLRV-SGSSYIFLVLYVDDILLASNDSDLLIETKHMLSTHFDMKDLGEASYVLGIKILRDRANGVLKLSQRTYIEKILKMFNM 815          
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A6A4D1J5_9STRA (Integrase catalytic domain-containing protein n=3 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4D1J5_9STRA)

HSP 1 Score: 114 bits (286), Expect = 4.740e-26
Identity = 78/264 (29.55%), Postives = 121/264 (45.83%), Query Frame = 1
Query:    1 EPTTMGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQV---------------------------KGIHYEEFFSPTP-AQASIRMVFGIKLEAKGFQ----------------------------------------KVDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 588
            EP T+ EA+ S +W +WK+AI  E+    A G + VV  P G  V+GT + F+ K   DGR+++ + R+ AQGF+++                            GIH  +   PT   +A++R V  +K + KGF+                                        + DPC+ +   H   ++V++VYVDD+L+    + D  + +  L   + IKDLG+ S++LG H+TRD   G +K DQ QY   V ERF
Sbjct:  321 EPLTLEEARRSPQWTEWKKAILAEIEALRANGTFTVVTPPAGAHVIGTTMNFRVKRHADGRVDRLRARICAQGFQEIYMIDFVDTYAPVARLISIRVFLAECNQSGIHIRQGDVPTAFVKANLREVIYVK-QPKGFEEGEPGQVWLLHKALYGLKQAGREWYIELDEFLRSQGLVPTREDPCVHK---HPAKLLVVLVYVDDILIGYKNEEDMRELMNALEVKYGIKDLGELSWFLGMHVTRDFERGVMKIDQEQYAIEVCERF 580          
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438GBB1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GBB1_VITVI)

HSP 1 Score: 114 bits (285), Expect = 7.290e-26
Identity = 73/205 (35.61%), Postives = 105/205 (51.22%), Query Frame = 1
Query:    1 EPTTMGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLEAKGFQKVDPCMFRRILHG---------TVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 588
            +P +  +A +  E   W  A+  EM+      VW +VE P G   +G + VFK K D  G IE+ K RLVA+GF Q +GI Y E FSP   +  ++   G    + G Q V  C  ++ ++G         + V  +V+YVDD+L+A+  K    +  + L   F +KD+G+ SY +G  I RDR  G L   Q  YI  V ERF
Sbjct: 1198 DPESFSQAMSCKESELWYNAMKDEMSSMKCNDVWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPLEEEVYMKQPEGFP-SSDGEQLV--CKLKKSIYGLKQASRQCGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERF 1399          
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A5AFZ5_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AFZ5_VITVI)

HSP 1 Score: 114 bits (284), Expect = 9.620e-26
Identity = 66/210 (31.43%), Postives = 106/210 (50.48%), Query Frame = 1
Query:    1 EPTTMGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLEAKGFQK--------------VDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 588
            +P    +A  SS   +W  A+  E        VW++V  P G   +G + +FK K D +G +E+ K RLVA+GF Q +GI ++E FSP   + S R++  ++   + + K              +D C++ +   G+  + +V+YVDD+L+A+          R L   F +KD+G  S+ LG  I RDR+ G L   Q  YI  V +R+
Sbjct:  788 DPINFQQAMKSSNSQKWIEAMNEEYKSMQDNKVWELVPLPVGTKPIGCKWIFKTKRDSNGNVERYKARLVAKGFTQKEGIDFKETFSPVSTKDSFRIIMALQASRQWYFKFHQIIVSYGFEANLMDECVYHK-FSGSKYIFLVLYVDDILLATNDISILHDTKRFLSKHFEMKDIGDASFILGIQIHRDRSRGILGLSQRTYIDKVLQRY 996          
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438E557_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E557_VITVI)

HSP 1 Score: 113 bits (282), Expect = 1.370e-25
Identity = 73/218 (33.49%), Postives = 111/218 (50.92%), Query Frame = 1
Query:    1 EPTTMGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGI---------KLEAKG----------FQKVDPCMFRRILHGTV---VVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERF 588
            +P ++ + + SS+  +W  A+  EM      GVW +VE P+G   +G + +FK K D  G I + K RLVA+GF Q +GI Y+E FSP  ++ S R++  +         +++ K              V P  F       +   ++++V+YVDD+L+AS+      +  R L S F +KDLG  S+ LG  I RDR+ G L   Q  YI  V  RF
Sbjct:  214 DPISVSQVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVELPEGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLWEQIIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRF 431          
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Match: A0A438EBZ3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EBZ3_VITVI)

HSP 1 Score: 113 bits (282), Expect = 1.820e-25
Identity = 73/204 (35.78%), Postives = 105/204 (51.47%), Query Frame = 1
Query:   10 TMGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKRKIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLEAKGFQKVDPCMFRRILHG---------TVVVVIVVYVDDLLVASATKCDKEQAVRDLRSCFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERFDV 594
            ++ +A +  E   W  A+  EM+      VW +VE P G   +G + VFK K D  G IE+ K RLVA+GF Q +GI Y E FSP   +  ++   G    + G Q V  C  ++ ++G         + V  +V+YVDD+L+A+  K    +  + L   F +KD+G+ SY LG  I RDR  G L   Q  YI  V ERF +
Sbjct:  733 SLSQAMSCKESELWYNAMKDEMSSMKCNDVWDLVELPNGAKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPLEEEVYMKQPEGFP-SSDGEQLV--CKLKKSIYGLKQASRQCGSKVCFLVLYVDDILLATNDKGLLHEVKQFLFKNFDMKDMGEASYVLGIKIHRDRFKGILGLSQETYINKVLERFQM 933          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8650.16213.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438IJY3_VITVI2.610e-3237.76Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5JVD4_9PHAE5.620e-3235.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A438FXS9_VITVI1.390e-2833.65Retrovirus-related Pol polyprotein from transposon... [more]
A0A438FNN4_VITVI1.070e-2633.97Retrovirus-related Pol polyprotein from transposon... [more]
A5BKE8_VITVI1.090e-2635.50Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A4D1J5_9STRA4.740e-2629.55Integrase catalytic domain-containing protein n=3 ... [more]
A0A438GBB1_VITVI7.290e-2635.61Retrovirus-related Pol polyprotein from transposon... [more]
A5AFZ5_VITVI9.620e-2631.43Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
A0A438E557_VITVI1.370e-2533.49Retrovirus-related Pol polyprotein from transposon... [more]
A0A438EBZ3_VITVI1.820e-2535.78Retrovirus-related Pol polyprotein from transposon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig8650contigH-elongata_contig8650:7721..8506 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score113.6
Seed ortholog evalue1e-22
Seed eggNOG ortholog65672.G4TTI1
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,3NUZ7@4751,COG2801@1,KOG0017@2759
COG Functional cat.E
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size594
Cds size582
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig8650.16213.1prot_H-elongata_contig8650.16213.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig8650 7733..8506 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931266.4677358-UTR-H-elongata_contig8650:7720..77321622931266.4677358-UTR-H-elongata_contig8650:7720..7732Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8650 7721..7732 +
1691679766.0238976-UTR-H-elongata_contig8650:7720..77321691679766.0238976-UTR-H-elongata_contig8650:7720..7732Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig8650 7721..7732 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931266.4915652-CDS-H-elongata_contig8650:7732..80141622931266.4915652-CDS-H-elongata_contig8650:7732..8014Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8650 7733..8014 +
1691679766.033546-CDS-H-elongata_contig8650:7732..80141691679766.033546-CDS-H-elongata_contig8650:7732..8014Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8650 7733..8014 +
1622931266.5105205-CDS-H-elongata_contig8650:8206..85061622931266.5105205-CDS-H-elongata_contig8650:8206..8506Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8650 8207..8506 +
1691679766.0425844-CDS-H-elongata_contig8650:8206..85061691679766.0425844-CDS-H-elongata_contig8650:8206..8506Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig8650 8207..8506 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig8650.16213.1

>prot_H-elongata_contig8650.16213.1 ID=prot_H-elongata_contig8650.16213.1|Name=mRNA_H-elongata_contig8650.16213.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=194bp
MGEAQASSEWPQWKRAIAREMNGQTARGVWQVVECPKGKTVLGTRVVFKR
KIDKDGRIEKCKCRLVAQGFRQVKGIHYEEFFSPTPAQASIRMVFGIKLE
AKGFQKVDPCMFRRILHGTVVVVIVVYVDDLLVASATKCDKEQAVRDLRS
CFSIKDLGQTSYYLGCHITRDRNAGTLKFDQHQYIQTVAERFDV
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mRNA from alignment at H-elongata_contig8650:7721..8506+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig8650.16213.1 ID=mRNA_H-elongata_contig8650.16213.1|Name=mRNA_H-elongata_contig8650.16213.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=786bp|location=Sequence derived from alignment at H-elongata_contig8650:7721..8506+ (Himanthalia elongata Himel1 dioecious)
GAGCCGACAACCATGGGCGAGGCACAAGCGTCGTCGGAGTGGCCGCAATG GAAAAGGGCGATCGCGCGCGAGATGAATGGGCAAACTGCTCGGGGCGTGT GGCAGGTGGTAGAGTGCCCAAAAGGGAAGACGGTGTTGGGCACGAGAGTA GTTTTCAAGCGAAAAATCGACAAGGATGGAAGGATTGAGAAGTGTAAATG TCGTCTCGTGGCGCAGGGTTTCAGGCAGGTTAAAGGCATACACTACGAGG AATTCTTCTCTCCGACTCCTGCGCAGGCCAGCATTAGGATGGTAGTCAGC ATGATCGCAACTTCCGACTAGGAGGCGCGGCAGGTGGACGTCGACATGGC CTACCTGGAGGCCGAAGTGGAGGGGGAGATCTACGTTGAGCTCCCGGAGG CATACCGTGACTCCAGGTAGCAAGTCGGCATACTAAAGAAGGCAATGTAC GAACTCGTCCACGCCGGGCTGCTGTGGTAAAAACAGTTCGGGATCAAGCT CGAGGCGAAGGGTTTTCAGAAAGTCGACCCATGCATGTTCCGGCGGATTC TCCACGGGACAGTGGTAGTCGTCATCGTGGTCTACGTCGACGACCTGCTG GTTGCTAGTGCGACGAAATGTGATAAGGAGCAAGCGGTGAGGGACCTGCG CTCCTGTTTCTCCATCAAGGATCTAGGGCAAACTTCATATTACCTGGGAT GCCACATCACGAGGGACCGAAACGCCGGGACACTGAAGTTCGACCAGCAT CAGTACATACAGACTGTGGCGGAACGTTTTGACGTG
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Coding sequence (CDS) from alignment at H-elongata_contig8650:7721..8506+

>mRNA_H-elongata_contig8650.16213.1 ID=mRNA_H-elongata_contig8650.16213.1|Name=mRNA_H-elongata_contig8650.16213.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1164bp|location=Sequence derived from alignment at H-elongata_contig8650:7721..8506+ (Himanthalia elongata Himel1 dioecious)
ATGGGCGAGGCACAAGCGTCGTCGGAGTGGCCGCAATGGAAAAGGGCGAT
CGCGCGCGAGATGAATGGGCAAACTGCTCGGGGCGTGTGGCAGGTGGTAG
AGTGCCCAAAAGGGAAGACGGTGTTGGGCACGAGAGTAGTTTTCAAGCGA
AAAATCGACAAGGATGGAAGGATTGAGAAGTGTAAATGTCGTCTCGTGGC
GCAGGGTTTCAGGCAGGTTAAAGGCATACACTACGAGGAATTCTTCTCTC
CGACTCCTGCGCAGGCCAGCATTAGGATGGTAATGGGCGAGGCACAAGCG
TCGTCGGAGTGGCCGCAATGGAAAAGGGCGATCGCGCGCGAGATGAATGG
GCAAACTGCTCGGGGCGTGTGGCAGGTGGTAGAGTGCCCAAAAGGGAAGA
CGGTGTTGGGCACGAGAGTAGTTTTCAAGCGAAAAATCGACAAGGATGGA
AGGATTGAGAAGTGTAAATGTCGTCTCGTGGCGCAGGGTTTCAGGCAGGT
TAAAGGCATACACTACGAGGAATTCTTCTCTCCGACTCCTGCGCAGGCCA
GCATTAGGATGGTATTCGGGATCAAGCTCGAGGCGAAGGGTTTTCAGAAA
GTCGACCCATGCATGTTCCGGCGGATTCTCCACGGGACAGTGGTAGTCGT
CATCGTGGTCTACGTCGACGACCTGCTGGTTGCTAGTGCGACGAAATGTG
ATAAGGAGCAAGCGGTGAGGGACCTGCGCTCCTGTTTCTCCATCAAGGAT
CTAGGGCAAACTTCATATTACCTGGGATGCCACATCACGAGGGACCGAAA
CGCCGGGACACTGAAGTTCGACCAGCATCAGTACATACAGACTGTGGCGG
AACGTTTTGACGTGTTCGGGATCAAGCTCGAGGCGAAGGGTTTTCAGAAA
GTCGACCCATGCATGTTCCGGCGGATTCTCCACGGGACAGTGGTAGTCGT
CATCGTGGTCTACGTCGACGACCTGCTGGTTGCTAGTGCGACGAAATGTG
ATAAGGAGCAAGCGGTGAGGGACCTGCGCTCCTGTTTCTCCATCAAGGAT
CTAGGGCAAACTTCATATTACCTGGGATGCCACATCACGAGGGACCGAAA
CGCCGGGACACTGAAGTTCGACCAGCATCAGTACATACAGACTGTGGCGG
AACGTTTTGACGTG
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