mRNA_H-elongata_contig86192.16195.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Match: A0A6H5JIN4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIN4_9PHAE) HSP 1 Score: 127 bits (320), Expect = 1.820e-36 Identity = 63/82 (76.83%), Postives = 73/82 (89.02%), Query Frame = 1
Query: 16 ERLLVSETTDHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAKAVTLRQAIVLAGIAEFLGAVLLGNHVSKAVRESIVD 261
ER+LV ETTD FLWI+IVG FGAFFAAFGIGANDVANAFATSVGAKA+T++QA++LAGI EFLGAV LG+HV+K +R I D
Sbjct: 8 ERILVPETTDQFLWILIVGAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVILAGIFEFLGAVFLGSHVTKTIRSGIAD 89
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Match: D7G0K9_ECTSI (Phosphate transporter n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0K9_ECTSI) HSP 1 Score: 130 bits (328), Expect = 5.310e-34 Identity = 65/82 (79.27%), Postives = 73/82 (89.02%), Query Frame = 1
Query: 16 ERLLVSETTDHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAKAVTLRQAIVLAGIAEFLGAVLLGNHVSKAVRESIVD 261
ER+L ETTDHFLWIVIVG FGAFFAAFGIGANDVANAFATSVGAKA+T++QA+VLAGI EFLGAV LG+HV+K +R I D
Sbjct: 8 ERILAPETTDHFLWIVIVGAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAGIFEFLGAVFLGSHVTKTIRSGIAD 89
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Match: D7G5U7_ECTSI (High affinity phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5U7_ECTSI) HSP 1 Score: 122 bits (306), Expect = 2.470e-33 Identity = 60/82 (73.17%), Postives = 71/82 (86.59%), Query Frame = 1
Query: 16 ERLLVSETTDHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAKAVTLRQAIVLAGIAEFLGAVLLGNHVSKAVRESIVD 261
ER+L E TD FLWI+IV FGAFFAAFGIGANDVANAFATSVGAKA+T++QA+VLAG+ EFLGAV LG+HV+K +R+ I D
Sbjct: 33 ERILAPEATDQFLWILIVAAFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAGVFEFLGAVFLGSHVTKTIRKGIAD 114
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Match: D8LJQ3_ECTSI (Pho4 high affinity phosphate transporter, probable (IC) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ3_ECTSI) HSP 1 Score: 114 bits (286), Expect = 1.610e-31 Identity = 58/81 (71.60%), Postives = 72/81 (88.89%), Query Frame = 1
Query: 19 RLLVSETTDHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAKAVTLRQAIVLAGIAEFLGAVLLGNHVSKAVRESIVD 261
R+L E +D +LWIV+VG FG+F AAFGIGANDVANAF+TSVGA+AVTL+QAIVLAG+ EFLGA+LLG V+KA+RE+IV+
Sbjct: 8 RMLAPEASDQWLWIVVVGAFGSFLAAFGIGANDVANAFSTSVGARAVTLKQAIVLAGVFEFLGALLLGAPVTKAIRENIVN 88
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Match: D7FZJ7_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZJ7_ECTSI) HSP 1 Score: 120 bits (300), Expect = 5.070e-30 Identity = 61/82 (74.39%), Postives = 70/82 (85.37%), Query Frame = 1
Query: 16 ERLLVSETTDHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAKAVTLRQAIVLAGIAEFLGAVLLGNHVSKAVRESIVD 261
ER+L +TT+ FLWI+IVG FGAFFAAFGIGANDVANAFATSVGAKA+TLRQA+VLAGI EFLGAV LG+HV+ +R D
Sbjct: 8 ERILAPDTTNGFLWILIVGTFGAFFAAFGIGANDVANAFATSVGAKALTLRQAVVLAGIFEFLGAVFLGSHVTSTIRSGTAD 89
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Match: A0A6H5JNE7_9PHAE (Phosphate transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNE7_9PHAE) HSP 1 Score: 118 bits (296), Expect = 1.830e-29 Identity = 59/82 (71.95%), Postives = 70/82 (85.37%), Query Frame = 1
Query: 16 ERLLVSETTDHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAKAVTLRQAIVLAGIAEFLGAVLLGNHVSKAVRESIVD 261
ER+L ETTD +LWI+IV FGAFFAAFGIGANDVANAFATSVGAKA+T++QA+VLA I EF GAV LG+HV+K +R+ I D
Sbjct: 7 ERILAPETTDQWLWILIVASFGAFFAAFGIGANDVANAFATSVGAKALTIKQAVVLAAIFEFAGAVFLGSHVTKTIRKGIAD 88
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Match: D7FWT9_ECTSI (Phosphate transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT9_ECTSI) HSP 1 Score: 111 bits (277), Expect = 9.190e-27 Identity = 55/82 (67.07%), Postives = 66/82 (80.49%), Query Frame = 1
Query: 16 ERLLVSETTDHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAKAVTLRQAIVLAGIAEFLGAVLLGNHVSKAVRESIVD 261
ER+L T FLWIVIV GA FAAFGIGAND+ANAFATSVGA+A+T++QA+VLAG+ EFLGAV LG+HV+K +R I D
Sbjct: 8 ERILAPAVTSEFLWIVIVSSIGAVFAAFGIGANDLANAFATSVGARALTIKQAVVLAGVFEFLGAVFLGSHVAKTIRSGIAD 89
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Match: A0A6U1NDP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NDP7_9STRA) HSP 1 Score: 101 bits (251), Expect = 4.030e-25 Identity = 50/73 (68.49%), Postives = 61/73 (83.56%), Query Frame = 1
Query: 43 DHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAKAVTLRQAIVLAGIAEFLGAVLLGNHVSKAVRESIVD 261
D +LWIVIVGGF A F A+GIGANDVANAF+TSVGAK +TL+QA++L GI EFLGA L G+HV+K +R+ I D
Sbjct: 7 DDYLWIVIVGGFLAVFTAYGIGANDVANAFSTSVGAKTLTLKQAVILGGIFEFLGAFLFGSHVTKTIRKGIAD 79
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Match: D8LJQ0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ0_ECTSI) HSP 1 Score: 94.7 bits (234), Expect = 2.210e-23 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 1
Query: 16 ERLLVSETTDHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAKAVTLRQAIVLAGIAEFLGAVLLGNHVSKAVRESIVD 261
+R+L E T +LWIV V GA AA GIGANDVAN+FATSVG+KA+TL++A++LAGI EF GA+LLG A+ ESI D
Sbjct: 8 QRVLAPEATGQWLWIVSVASLGALCAALGIGANDVANSFATSVGSKALTLKKALLLAGICEFFGALLLGRQAMTAISESIAD 89
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Match: A0A7S2V1L4_9STRA (Phosphate transporter n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1L4_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.500e-23 Identity = 50/73 (68.49%), Postives = 61/73 (83.56%), Query Frame = 1
Query: 43 DHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAKAVTLRQAIVLAGIAEFLGAVLLGNHVSKAVRESIVD 261
D +LWIVIVGGF A F A+GIGANDVANAF+TSVGAK +TL+QA++L GI EFLGA L G+HV+K +R+ I D
Sbjct: 7 DDYLWIVIVGGFLAVFTAYGIGANDVANAFSTSVGAKTLTLKQAVILGGIFEFLGAFLFGSHVTKTIRKGIAD 79 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86192.16195.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig86192.16195.1 >prot_H-elongata_contig86192.16195.1 ID=prot_H-elongata_contig86192.16195.1|Name=mRNA_H-elongata_contig86192.16195.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=87bp MSIPHERLLVSETTDHFLWIVIVGGFGAFFAAFGIGANDVANAFATSVGAback to top mRNA from alignment at H-elongata_contig86192:1420..1680- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig86192.16195.1 ID=mRNA_H-elongata_contig86192.16195.1|Name=mRNA_H-elongata_contig86192.16195.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=261bp|location=Sequence derived from alignment at H-elongata_contig86192:1420..1680- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig86192:1420..1680- >mRNA_H-elongata_contig86192.16195.1 ID=mRNA_H-elongata_contig86192.16195.1|Name=mRNA_H-elongata_contig86192.16195.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=522bp|location=Sequence derived from alignment at H-elongata_contig86192:1420..1680- (Himanthalia elongata Himel1 dioecious)back to top |