mRNA_H-elongata_contig8613.16189.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 207 bits (528), Expect = 1.950e-63 Identity = 104/177 (58.76%), Postives = 127/177 (71.75%), Query Frame = 1
Query: 55 FNGLIGIWSFTEQRMAQRSNINRPTGAMDAICVEVNKERYKRMLVDQVILKIKEVWPAGSNRTILVQLDNAPSHRIATDPELVAASQSDGFNIELINKPPNSPDCNVLDFGFFYAVHSLQNCTTPRTNDELIAEVKRAFNAQTADKLSKVWTTQQAVLEQIMLAKGDNAFKIPHLKK 585
F G +GI+ FT QR AQR++ NR G M+ CVEV KE +KR +VD+V IK WP G RTI +QLDN PSHRI DP++VAA +DG++I LIN+P NSPD N+LD GFF AV SLQ+ TPRT DE I EVKRAF Q+ KVW + QA+L QI+LAKG+N FK+PHLKK
Sbjct: 88 FTGKLGIFQFTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSNSPDTNILDLGFFNAVQSLQDRNTPRTVDEFITEVKRAFEEQSPSTHDKVWVSLQAIL-QIILAKGNNTFKLPHLKK 263
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Match: A0A6H5JRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRZ6_9PHAE) HSP 1 Score: 159 bits (401), Expect = 4.140e-46 Identity = 90/182 (49.45%), Postives = 121/182 (66.48%), Query Frame = 1
Query: 1 MFLATVTRTRLDTTANSQFNGLIGIWSFT----EQRMAQRSNINRPTGAMDAICVEVNKERYKRMLVDQVILKIKEVWPAGSNRTILVQLDNAPSHRIATDPELVAASQSDGFNIELINKPPNSPDCNVLDFGFFYAVHSLQNCTTPRTNDELIAEVKRAFNAQTADKLSKVWTTQQAVLEQ 534
MFLA V R R D++ N F+G IGI+ FT QR AQR++ NR G + VEVN+ YK L++ V+ I+ +PA S T+ Q D+AP HR+ DPE+VAA+ + G IELIN+P NSPD NVLD GFF ++ SLQ+ TTP T D+L+AEV+RAF AQ+ + +VWTT Q+V +
Sbjct: 1 MFLAAVARPRFDSSRNRHFDGKIGIYPFTVQRAAQRAAQRNSRNRAAGTIVTRSVEVNRVTYKEKLINNVLPDIRAKFPAVS--TVFAQQDSAPGHRVM-DPEIVAAA-AQGRRIELINQPANSPDMNVLDLGFFNSIQSLQDRTTPTTIDQLVAEVERAFWAQSPGAVDRVWTTLQSVFRR 178
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 166 bits (420), Expect = 7.240e-46 Identity = 87/195 (44.62%), Postives = 119/195 (61.03%), Query Frame = 1
Query: 1 MFLATVTRTRLDTTANSQFNGLIGIWSFTEQRMAQRSNINRPTGAMDAICVEVNKERYKRMLVDQVILKIKEVWPAGSNRTILVQLDNAPSHRIATDPELVAASQSDGFNIELINKPPNSPDCNVLDFGFFYAVHSLQNCTTPRTNDELIAEVKRAFNAQTADKLSKVWTTQQAVLEQIMLAKGDNAFKIPHLKK 585
MFL V R R D+ ++G +G+W F E ++A+R + NR G + + V K Y+R LVD+VI I+ WP TI VQ DNA H DPE++AA + +G+NI+L+ +P SPD NVLD GFF A+ SLQ+ TT RT D+LI V+ AF L K + T Q V+E+ M + GDN +K+PHLKK
Sbjct: 209 MFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKEGWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKLPHLKK 403
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Match: A0A453R5D0_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453R5D0_AEGTS) HSP 1 Score: 156 bits (395), Expect = 1.230e-44 Identity = 75/193 (38.86%), Postives = 116/193 (60.10%), Query Frame = 1
Query: 1 MFLATVTRTRLDTTANSQFNGLIGIWSFTEQRMAQRSNINRPTGAMDAICVEVNKERYKRMLVDQVILKIKEVWPAGSNRTILVQLDNAPSHRIATDPELVAASQSDGFNIELINKPPNSPDCNVLDFGFFYAVHSLQNCTTPRTNDELIAEVKRAFNAQTADKLSKVWTTQQAVLEQIMLAKGDNAFKIPHL 579
MFL V R R D N F+G IG+W F ++ A R + R G ++ V VN+ +R ++++V+ IKEVWPA IL+Q DN +H + D E A + G +I++IN+PPNSPD N L+ G+F ++ SL +C P T ELI V+ F+ A KL++++ T Q ++ ++M G+N++KIPH+
Sbjct: 1 MFLTAVARPRYDAEGNMTFSGKIGVWPFVQEIPAARRSEYRARGTIEMKSVNVNRRVMRRYMIEKVVPGIKEVWPADDTNPILIQQDNVRTHILPGDAEFAEAVATTGLDIKIINQPPNSPDLNALELGYFRSLESLTDCRAPTTIKELIQGVQEEFDEYDAGKLNRIFLTLQTIMVEVMNHGGENSYKIPHI 193
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Match: UPI0009019CDE (uncharacterized protein LOC109159770 n=3 Tax=Ipomoea TaxID=4119 RepID=UPI0009019CDE) HSP 1 Score: 159 bits (402), Expect = 1.820e-44 Identity = 83/196 (42.35%), Postives = 118/196 (60.20%), Query Frame = 1
Query: 1 MFLATVTRTRLDTTANSQFNGLIGIWSFTEQRMAQRSNINRPTGAMDAICVE-VNKERYKRMLVDQVILKIKEVWPAGSNRTILVQLDNAPSHRIATDPELVAASQSDGFNIELINKPPNSPDCNVLDFGFFYAVHSLQNCTTPRTNDELIAEVKRAFNAQTADKLSKVWTTQQAVLEQIMLAKGDNAFKIPHLKK 585
MFL V R R D N F+G IG++ F + A+R + NR G ++ +E VNKE ++ L+D V+ I+ WP S++TI +Q DNA H D E + A++ DGF+I L +PPNSPD NVLD GFF A+ SLQ+ PR DEL+A +AFN + + LS V+ T Q + ++M G N +K+PH+ K
Sbjct: 99 MFLCAVARPRFDLERNEMFDGKIGMFPFVYKEPAKRRSKNREAGTLETKPIESVNKEVTRKWLIDYVLPAIRAKWPPSSSKTIYIQQDNARPHISMNDVEFLEAAKKDGFDIHLTCQPPNSPDMNVLDLGFFRALQSLQHQEAPRNVDELVAATHKAFNEISVESLSNVFLTLQLCMVEVMKKFGGNNYKLPHINK 294
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Match: A0A6A4YXI9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YXI9_9STRA) HSP 1 Score: 163 bits (412), Expect = 1.890e-44 Identity = 80/195 (41.03%), Postives = 123/195 (63.08%), Query Frame = 1
Query: 1 MFLATVTRTRLDTTANSQFNGLIGIWSFTEQRMAQRSNINRPTGAMDAICVEVNKERYKRMLVDQVILKIKEVWPAGSNRTILVQLDNAPSHRIATDPELVAASQSDGFNIELINKPPNSPDCNVLDFGFFYAVHSLQNCTTPRTNDELIAEVKRAFNAQTADKLSKVWTTQQAVLEQIMLAKGDNAFKIPHLKK 585
MFL+ V R RL+ F+G IG W FTE+ A R++ NRP G ++ V V + YK ML+D+VI IK WP+ + R +++Q DNA H +D +V A +S G+N++++ +PPNSPD N+LD GFF A+ SLQ R D++IA +A++ + + L+ + T Q +++I+ A+GDN +KIPH+ K
Sbjct: 218 MFLSAVARPRLNDDTGEWFDGKIGTWHFTEKVAAARTSRNRPAGTLETQPVSVTRPVYKAMLIDKVIPTIKSKWPSSAGRNVIIQQDNARPHVPPSDSAIVDACKSGGWNMKVVYQPPNSPDLNILDLGFFRAIQSLQEKNHSRNIDDIIAATDQAWSDELSSTLNDNFLTLQGCMQEIISAQGDNNYKIPHMGK 412
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Match: A0A484KMT8_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KMT8_9ASTE) HSP 1 Score: 160 bits (405), Expect = 2.650e-44 Identity = 89/196 (45.41%), Postives = 125/196 (63.78%), Query Frame = 1
Query: 1 MFLATVTRTRLDTTANSQFNGLIGIWSFTEQRMAQRSNINRPTGAMDAICVE-VNKERYKRMLVDQVILKIKEVWPAGSNRTILVQLDNAPSHRIATDPELVAASQSDGFNIELINKPPNSPDCNVLDFGFFYAVHSLQNCTTPRTNDELIAEVKRAFNAQTADKLSKVWTTQQAVLEQIMLAKGDNAFKIPHLKK 585
MFLA V R R + ++G IGI+ FT ++ AQRS+ NRP G ++ VN++ KRML+ +I IK+ WP GS+R I++Q DNA H DPE+VAA+Q +NI+L +PPNSPD NVLD GFF ++ S+Q+ T PR+ +L+ V AF + DKL+ V+ T Q V+ +I+ G N FKIPH+ K
Sbjct: 1 MFLAAVGRPRYGEGGDVLWDGKIGIFPFTFEQAAQRSSKNRPAGTLETKAEPTVNRDVMKRMLLTNLIPAIKQKWP-GSSRDIIIQQDNAKPHVDGNDPEIVAAAQEGDWNIQLKFQPPNSPDLNVLDLGFFRSIDSVQDQTAPRSLTDLVKFVTTAFEELSHDKLNNVFLTLQGVMGEILSHNGGNQFKIPHMGK 195
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Match: A0A484MU55_9ASTE (Uncharacterized protein n=2 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484MU55_9ASTE) HSP 1 Score: 161 bits (408), Expect = 5.720e-44 Identity = 86/196 (43.88%), Postives = 120/196 (61.22%), Query Frame = 1
Query: 1 MFLATVTRTRLDTTANSQFNGLIGIWSFTEQRMAQRSNINRPTGAMDAI-CVEVNKERYKRMLVDQVILKIKEVWPAGSNRTILVQLDNAPSHRIATDPELVAASQSDGFNIELINKPPNSPDCNVLDFGFFYAVHSLQNCTTPRTNDELIAEVKRAFNAQTADKLSKVWTTQQAVLEQIMLAKGDNAFKIPHLKK 585
MFL V R + ++G IGI+ F E A+R + NR G ++ + V KE K MLV+QVI I+E WP+ +R I++Q DNA H ATDPE +AA+ +GFNI L N+PPNSPD N+LD GFF A+ SL+ T P+ EL+ VK A+ T L+KVW + Q V++++M G N +K+PH+ K
Sbjct: 245 MFLCVVGRPFISENGEILWDGKIGIFPFVETVAAKRKSKNREAGVLEVKQLLSVTKEVTKDMLVNQVIPAIREKWPSFLDRNIILQQDNAKPHISATDPEFMAAASGNGFNIILTNQPPNSPDLNILDLGFFRAIQSLKEKTAPKNVAELVEAVKGAYATLTPQTLNKVWLSYQHVMQEVMNNDGGNKYKLPHMAK 440
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Match: A0A6G0WCP7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WCP7_9STRA) HSP 1 Score: 160 bits (405), Expect = 1.270e-43 Identity = 84/195 (43.08%), Postives = 117/195 (60.00%), Query Frame = 1
Query: 1 MFLATVTRTRLDTTANSQFNGLIGIWSFTEQRMAQRSNINRPTGAMDAICVEVNKERYKRMLVDQVILKIKEVWPAGSNRTILVQLDNAPSHRIATDPELVAASQSDGFNIELINKPPNSPDCNVLDFGFFYAVHSLQNCTTPRTNDELIAEVKRAFNAQTADKLSKVWTTQQAVLEQIMLAKGDNAFKIPHLKK 585
MF+A V R R D + +G IG+W F + A RS+ NRP G ++ + VNKE YK ML+ +VI IKE WP GS R +++Q DNA H A D ++ AA +N+ + N+PPNSPD NVLD GFF A+ SLQ R E+I V A+ A L+ + T QA L++++ +GDN +KIPH++K
Sbjct: 179 MFMAAVARPRWDEATRTWLDGKIGVWPFVIEVPAARSSRNRPAGTLELQTIPVNKETYKDMLLTKVITAIKEKWPLGSTRNVVIQQDNATPHVAAFDDDVSAACTDGEWNMIVRNQPPNSPDMNVLDLGFFRAIQSLQENCHSRYMMEIIDAVNSAWRDVEARTLNNNFLTLQACLQEVLKIEGDNKYKIPHMRK 373
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Match: W2QAD0_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2QAD0_PHYPN) HSP 1 Score: 157 bits (396), Expect = 2.690e-43 Identity = 87/197 (44.16%), Postives = 119/197 (60.41%), Query Frame = 1
Query: 1 MFLATVTRTRLDTTANSQFNGLIGIWSFTEQRMAQRSNINRPTGAMDAICVE-VNKERYKRMLVDQVILKIKEVWP-AGSNRTILVQLDNAPSHRIATDPELVAASQSDGFNIELINKPPNSPDCNVLDFGFFYAVHSLQNCTTPRTNDELIAEVKRAFNAQTADKLSKVWTTQQAVLEQIMLAKGDNAFKIPHLKK 585
MF+A V R R D F+G IGIW+F E+ A+R++ NRP G + VE V++E YK L+ +I IK WP +G RTI +Q DNA H DP+++AA +S G++I + +PPNSPD NVLD G+F ++ SLQ T R + L+ V AF+A AD LSK++ T Q +E I A G N +K PH K
Sbjct: 109 MFIAAVARPRYDAHRKQAFDGKIGIWAFAEEYEAKRTSKNRPKGTIVLRNVESVDREAYKATLIGDIIPAIKAKWPRSGKKRTIYIQQDNAKPHVSVDDPDIMAAGRSGGWDIRMRCQPPNSPDLNVLDLGYFRSIQSLQYQTECRGVEALLDTVNSAFSAMKADTLSKIFMTLQTCMECITRANGGNNYKTPHRGK 305 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig8613.16189.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig8613.16189.1 >prot_H-elongata_contig8613.16189.1 ID=prot_H-elongata_contig8613.16189.1|Name=mRNA_H-elongata_contig8613.16189.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=195bp MFLATVTRTRLDTTANSQFNGLIGIWSFTEQRMAQRSNINRPTGAMDAICback to top mRNA from alignment at H-elongata_contig8613:2309..2893+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig8613.16189.1 ID=mRNA_H-elongata_contig8613.16189.1|Name=mRNA_H-elongata_contig8613.16189.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=585bp|location=Sequence derived from alignment at H-elongata_contig8613:2309..2893+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig8613:2309..2893+ >mRNA_H-elongata_contig8613.16189.1 ID=mRNA_H-elongata_contig8613.16189.1|Name=mRNA_H-elongata_contig8613.16189.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1170bp|location=Sequence derived from alignment at H-elongata_contig8613:2309..2893+ (Himanthalia elongata Himel1 dioecious)back to top |