mRNA_H-elongata_contig86086.16185.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig86086.16185.1
Unique NamemRNA_H-elongata_contig86086.16185.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: D8LBL0_ECTSI (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBL0_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 6.110e-110
Identity = 167/211 (79.15%), Postives = 186/211 (88.15%), Query Frame = 1
Query:   34 MRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNSTRLHTSAASVVVMMEAE 666
            MR+RLE MKGRH+EIVESMT G VPVR+MG+VGKELGRLE VL+ QA V  KA+EI DLEEVM  +NA G E DREM+ IAKEE  +C + LE LRL+LTSLLLPRDE DSKNALLEVRSG+GGDEAA FA++LFEMYRRFAELKGW+FEG+ CS+ID GGYREA+ASIRGEDVYGSLK+ENGVHRVQRVPSNS RLHTSAASVVVMMEAE
Sbjct:    1 MRQRLEHMKGRHEEIVESMTKGEVPVREMGSVGKELGRLEAVLDLQAKVEEKAAEIQDLEEVMQATNAGGAEADREMHGIAKEEHADCTAALEKLRLDLTSLLLPRDEGDSKNALLEVRSGSGGDEAAAFAKELFEMYRRFAELKGWKFEGMTCSSIDAGGYREASASIRGEDVYGSLKFENGVHRVQRVPSNSPRLHTSAASVVVMMEAE 211          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A651FQP8_9PROT (Peptide chain release factor 1 n=1 Tax=Micavibrio sp. TaxID=2024841 RepID=A0A651FQP8_9PROT)

HSP 1 Score: 182 bits (462), Expect = 1.200e-52
Identity = 98/215 (45.58%), Postives = 139/215 (64.65%), Query Frame = 1
Query:   28 SSMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 666
            SS   +L+Q+  RH+E+   M+ G++   D  A+ +E   L  V EK  A  A  SEI DL+ ++     A  ET+ EM  +A++E       L  L  ++   LLP+DEAD+KNA+LE+R+GTGG+EAA+FA DLF MYR +A ++GW+FE +  S  D+GGY+E   S+ G +V+  LKYE+GVHRVQRVP   +  R+HTSAA+V V+ EAE
Sbjct:    4 SSFAHKLDQVLARHQELSALMSTGSLSSEDFTAMSREYAELSPVAEKIEAYKAAQSEIDDLKTLL-----AEAETEGEMRQMAEDELYALEKTLPDLEQDIRIALLPKDEADTKNAILEIRAGTGGEEAALFAADLFAMYRGYATIQGWRFEIMEASESDIGGYKEVIVSVSGTNVFARLKYESGVHRVQRVPKTESGGRVHTSAATVAVLPEAE 213          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A437QN19_9PROT (Peptide chain release factor 1 n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A437QN19_9PROT)

HSP 1 Score: 178 bits (452), Expect = 3.740e-51
Identity = 93/214 (43.46%), Postives = 139/214 (64.95%), Query Frame = 1
Query:   31 SMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 666
            S R+RL+++  R +E+ + M  G +  ++  A+ KE   +  ++EK  A  +   E +DLEE++     A   TD EM  +A+EE  +    L  +  +L  +LLP+DEAD++N ++E+R+GTGGDEAA+FA DL+ MY+++A L GW+ E +  S  D+GGY +  ASI G DVY  +KYE+GVHRVQRVP   +  R+HTSAA+V V+ EAE
Sbjct:    2 SWRDRLQRVTARAQELSDRMAAGNLDAQEFTALSKEYADISPIVEKIEAFQSAEQERADLEELL-----ADKSTDAEMREMAREEANDLKERLPEIEHQLQLMLLPKDEADARNVIIEIRAGTGGDEAALFAGDLYRMYQKYAALNGWRMEAIDISENDIGGYSQIVASISGGDVYARMKYESGVHRVQRVPVTESGGRIHTSAATVAVLPEAE 210          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A2E5PI74_9PROT (Peptide chain release factor 1 n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PI74_9PROT)

HSP 1 Score: 177 bits (450), Expect = 6.410e-51
Identity = 96/214 (44.86%), Postives = 141/214 (65.89%), Query Frame = 1
Query:   31 SMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 666
            SM ER + +  RH+E+   M+ G +   +  A+  E   L  ++EK  ++ A  SE+ DL E+        V+ D EM  +A+ E +   + L  L  EL  +LLP+D ADSKNA+LEVR+GTGGDEA++FA +LF MY+R+A+++GW+FE +  S  ++GGY+EA+A I G  V+  LK+E+GVHRVQRVP+  +  R+HTSAA+V V+ EAE
Sbjct:    2 SMEERFDSLIMRHEELAALMSTGDLEPSEFTALSVEYAELSPIVEKVQSLKAARSELEDLVEL-------SVDGDLEMKELAETEARVLKAKLPDLEQELRVMLLPKDAADSKNAILEVRAGTGGDEASLFAAELFRMYQRYADIQGWRFEPMSISDTELGGYKEASALISGRGVFARLKFESGVHRVQRVPATESGGRVHTSAATVAVLPEAE 208          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: G8AT31_9PROT (Peptide chain release factor 1 n=29 Tax=Azospirillaceae TaxID=2829815 RepID=G8AT31_9PROT)

HSP 1 Score: 176 bits (447), Expect = 1.890e-50
Identity = 98/214 (45.79%), Postives = 141/214 (65.89%), Query Frame = 1
Query:   31 SMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 666
            S+ E+  ++  RH E+ ++M  GTV   D   + KE   L  V E  A +    +E +DL  +  +++ AG   D +M ++A+EE  +    + +L   +   LLP+DEAD KNA+LEVR+GTGGDEAA+FA +LFEMYRR+A L+GW+FE +  S   +GGY+EA A+I G +V+  LK+E+GVHRVQRVP+  T  R+HTSAA+V V+ EAE
Sbjct:    2 SLDEKFNRVVARHDELRDAMAAGTVDPADFARLSKEYADLTPVAEAIAELKKAKAEAADLAGM--IADPAG---DADMKALAEEEFGDLTRRIPALERRVQISLLPKDEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLQGWRFETMEVSETGIGGYKEAIANITGRNVFARLKFESGVHRVQRVPATETQGRIHTSAATVAVLPEAE 210          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A6M8VLF0_9PROT (Peptide chain release factor 1 n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A6M8VLF0_9PROT)

HSP 1 Score: 176 bits (447), Expect = 1.980e-50
Identity = 96/214 (44.86%), Postives = 138/214 (64.49%), Query Frame = 1
Query:   31 SMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 666
            S   +LEQ+  RH+E+   M+ GT    +  ++ +E   L  + EK  +  + A E +DLE   G+    G+  D++M  +A+EE       L  L  ++   LLP+DEAD+KNA+LE+R+GTGGDEAA+FA DLF+MYR +A L+GW+FE +  S  D+GGY+E   SI G +V+  LK+E+GVHRVQRVP   +  R+HTSAA+V V+ EAE
Sbjct:    5 SFHRKLEQVLARHQELTALMSEGTASSEEFVSMSREYAELSPIAEKIESYQSAAGEAADLE---GMIADPGM--DKDMRDMAEEELYALQKKLPDLEHDIRIALLPKDEADAKNAILEIRAGTGGDEAALFASDLFDMYRGYAGLRGWRFEIMEASESDIGGYKEVIVSITGTNVFARLKFESGVHRVQRVPKTESGGRIHTSAATVAVLPEAE 213          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A3D9HEZ6_9PROT (Peptide chain release factor 1 n=1 Tax=Aestuariispira insulae TaxID=1461337 RepID=A0A3D9HEZ6_9PROT)

HSP 1 Score: 176 bits (445), Expect = 3.940e-50
Identity = 96/210 (45.71%), Postives = 136/210 (64.76%), Query Frame = 1
Query:   43 RLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 666
            RL+++  RH+E+ +++  G        A+ KE   L  ++EK AA  A   E+SDLEE++     A  + D EM  +A+EE Q     L  L  +L   LLP+D+ADS+NA+LE+R+GTGGDEAA+FA DLF MY+R+A   GW+ E +  S  ++GG+ +  AS+ G DV+  LKYE+GVHRVQRVP   +  R+HTSAA+V V+ EAE
Sbjct:    6 RLDRVVARHQELSDTLASGQAEGDAFVALSKEFAELSPIVEKVAAFKAAQQELSDLEEMV-----ADPDADAEMKELAEEELQTLNEQLPDLEHQLQLALLPKDQADSRNAILEIRAGTGGDEAALFAGDLFRMYQRYAANHGWRVELIEESANEIGGFSQVVASVSGSDVFKRLKYESGVHRVQRVPETESGGRIHTSAATVAVLPEAE 210          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: UPI0004296B1D (peptide chain release factor 1 n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004296B1D)

HSP 1 Score: 173 bits (439), Expect = 3.020e-49
Identity = 96/214 (44.86%), Postives = 136/214 (63.55%), Query Frame = 1
Query:   31 SMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 666
            S+ E  +++  RH E+ ++++ GT    +   + +E   L  V E   A+    +E +DL  +     AA    D EM ++A EE +E    L +L   +   LLPRDEAD KNA+LEVR+GTGG+EAA+FA +LFEMYRR+A L GW+FE +  S   +GGY+EA A+I G +V+  LK+E+GVHRVQRVP+     R+HTSAA+V V+ EAE
Sbjct:    2 SLEETFDRVLARHDELRDALSAGTADSGEFARLSREYAELTPVAEAIGALKKARAETADLAAM-----AADPAADAEMRALAAEELRELEGRLPALERTVQVALLPRDEADEKNAILEVRAGTGGEEAALFAAELFEMYRRYAGLHGWRFETMEVSETGLGGYKEAIANITGRNVFARLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAE 210          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: A0A7W1AWP7_9HYPH (Peptide chain release factor 1 n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W1AWP7_9HYPH)

HSP 1 Score: 173 bits (438), Expect = 4.690e-49
Identity = 97/212 (45.75%), Postives = 140/212 (66.04%), Query Frame = 1
Query:   40 ERLEQMKGRHKEIVESMTVGTVPVRDMGA-VGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 666
            ERL  +  RH+ +   +  G  P RD    + +EL  L+ V EK  A+S   +E++++E ++     A   T+R+M ++A++ER      +E++R EL  LL+PRD AD ++A+LEVR+GTGGDEA +FA +LF MY R+A LKGW+ E L  S  ++GGYRE  A++RG  VY  LK+E+GVHRVQRVP+     R+HTSAA+V V+ EAE
Sbjct:    8 ERLRSLIHRHEAVNAMLAAG--PARDEYVRLSRELAELDPVAEKARALSVVEAELAEMEALI-----ADAATERDMRALAEDERLALREKIEAIRGELRVLLVPRDAADDRSAILEVRAGTGGDEAGLFAGNLFRMYERYAALKGWRIEALSASEGEMGGYREIVAAVRGVGVYARLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEAE 212          
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Match: UPI001D0223BF (peptide chain release factor 1 n=1 Tax=Nisaea sediminum TaxID=2775867 RepID=UPI001D0223BF)

HSP 1 Score: 172 bits (437), Expect = 5.170e-49
Identity = 99/214 (46.26%), Postives = 133/214 (62.15%), Query Frame = 1
Query:   34 MRERLEQMKGRHKEIVESMTVGT-VPVRDMGAVGKELGRLEVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECVSVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYRRFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQRVPSNST--RLHTSAASVVVMMEAE 666
            M+  LE++  RHKE+   +  G  V  +D+  + +EL  L  V EK   +     E+ D         A G+  D +M  +A EE +     L +L  E+  LLLP+DEAD KNA+LEVR+GTGGDEAA+FA DLF MY+R+A  KGW+FE +  S  D+GGY+EA A I G  V+  LK+E+GVHRVQRVP   +  R+HTSAA+V V+ EAE
Sbjct:    1 MQANLERVLARHKELEAMLASGNGVASQDIAKLSRELSELAPVAEKVTELKEMRKELED---------ARGLLEDPDMEDMATEEIERLEKELPALEREVQILLLPKDEADEKNAILEVRAGTGGDEAALFASDLFGMYQRYAAQKGWKFEIMEISENDIGGYKEAIAEISGRSVFARLKFESGVHRVQRVPVTESGGRIHTSAATVAVLPEAE 205          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig86086.16185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBL0_ECTSI6.110e-11079.15RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
A0A651FQP8_9PROT1.200e-5245.58Peptide chain release factor 1 n=1 Tax=Micavibrio ... [more]
A0A437QN19_9PROT3.740e-5143.46Peptide chain release factor 1 n=1 Tax=Hwanghaeell... [more]
A0A2E5PI74_9PROT6.410e-5144.86Peptide chain release factor 1 n=1 Tax=Rhodospiril... [more]
G8AT31_9PROT1.890e-5045.79Peptide chain release factor 1 n=29 Tax=Azospirill... [more]
A0A6M8VLF0_9PROT1.980e-5044.86Peptide chain release factor 1 n=1 Tax=Proteobacte... [more]
A0A3D9HEZ6_9PROT3.940e-5045.71Peptide chain release factor 1 n=1 Tax=Aestuariisp... [more]
UPI0004296B1D3.020e-4944.86peptide chain release factor 1 n=1 Tax=Azospirillu... [more]
A0A7W1AWP7_9HYPH4.690e-4945.75Peptide chain release factor 1 n=1 Tax=Hyphomicrob... [more]
UPI001D0223BF5.170e-4946.26peptide chain release factor 1 n=1 Tax=Nisaea sedi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig86086contigH-elongata_contig86086:449..2730 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score330.5
Seed ortholog evalue6.1e-88
Seed eggNOG ortholog2880.D8LBL0
KEGG rclassRC00010
KEGG koko:K02433,ko:K02835
KEGG ReactionR03905,R04212
KEGG Pathwayko00970,ko01100,map00970,map01100
EggNOG free text desc.translation release factor activity
EggNOG OGsCOG0216@1,KOG2726@2759
EC6.3.5.6,6.3.5.7
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03012,ko03029
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionPeptide chain release factor
Ec32 orthologEc-27_003560.1
Exons6
Model size666
Cds size666
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig86086.16185.1prot_H-elongata_contig86086.16185.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig86086 449..2730 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931263.6927526-CDS-H-elongata_contig86086:448..5101622931263.6927526-CDS-H-elongata_contig86086:448..510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 449..510 +
1691679764.9537277-CDS-H-elongata_contig86086:448..5101691679764.9537277-CDS-H-elongata_contig86086:448..510Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 449..510 +
1622931263.7167497-CDS-H-elongata_contig86086:1062..12161622931263.7167497-CDS-H-elongata_contig86086:1062..1216Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 1063..1216 +
1691679764.9720418-CDS-H-elongata_contig86086:1062..12161691679764.9720418-CDS-H-elongata_contig86086:1062..1216Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 1063..1216 +
1622931263.7363331-CDS-H-elongata_contig86086:1432..15661622931263.7363331-CDS-H-elongata_contig86086:1432..1566Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 1433..1566 +
1691679764.9847329-CDS-H-elongata_contig86086:1432..15661691679764.9847329-CDS-H-elongata_contig86086:1432..1566Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 1433..1566 +
1622931263.7562296-CDS-H-elongata_contig86086:1800..19611622931263.7562296-CDS-H-elongata_contig86086:1800..1961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 1801..1961 +
1691679764.994874-CDS-H-elongata_contig86086:1800..19611691679764.994874-CDS-H-elongata_contig86086:1800..1961Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 1801..1961 +
1622931263.771772-CDS-H-elongata_contig86086:2260..23401622931263.771772-CDS-H-elongata_contig86086:2260..2340Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 2261..2340 +
1691679765.004208-CDS-H-elongata_contig86086:2260..23401691679765.004208-CDS-H-elongata_contig86086:2260..2340Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 2261..2340 +
1622931263.7837913-CDS-H-elongata_contig86086:2655..27301622931263.7837913-CDS-H-elongata_contig86086:2655..2730Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 2656..2730 +
1691679765.014912-CDS-H-elongata_contig86086:2655..27301691679765.014912-CDS-H-elongata_contig86086:2655..2730Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig86086 2656..2730 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig86086.16185.1

>prot_H-elongata_contig86086.16185.1 ID=prot_H-elongata_contig86086.16185.1|Name=mRNA_H-elongata_contig86086.16185.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=222bp
SSEEAAWLPSSMRERLEQMKGRHKEIVESMTVGTVPVRDMGAVGKELGRL
EVVLEKQAAVSAKASEISDLEEVMGLSNAAGVETDREMYSIAKEERQECV
SVLESLRLELTSLLLPRDEADSKNALLEVRSGTGGDEAAMFARDLFEMYR
RFAELKGWQFEGLHCSTIDVGGYREATASIRGEDVYGSLKYENGVHRVQR
VPSNSTRLHTSAASVVVMMEAE
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mRNA from alignment at H-elongata_contig86086:449..2730+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig86086.16185.1 ID=mRNA_H-elongata_contig86086.16185.1|Name=mRNA_H-elongata_contig86086.16185.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2282bp|location=Sequence derived from alignment at H-elongata_contig86086:449..2730+ (Himanthalia elongata Himel1 dioecious)
TCTTCAGAGGAAGCTGCGTGGTTGCCTTCCAGCATGAGAGAGAGACTGGA GCAGATGAAAGGGTGAGATAAGTAAGCTTTAGACCATCGTGCTTTCCGTT TCAGAAGATATCCCTTAAACGAGGTTGTGTGCTATGGTACGTTATAGCCT AAACGACATGCGTTGTATTTCACTGAGTCATTTCGAGTTGTGCTCTGTTG AATTCCGCAGTGAGTTGTGTGATTGTGCTCACGTAACCAAGAGTTCGTGG TTGGAAGATCGAGCAAGTTCGAATATCAGTCATTTGCATCACATCAGAAA TCACTTGGCAGGACAAAATACTAACGTCCTTTTAGGAAGAACAATGACCG GTATACTTGTAGACGCTCCCTACATGCCACGCGAAGCGTCTTGCGCTCGA AGGACATCACAATCAAACATGCGGCGTCTCGGAACTTTTCGTTTGGGTAT CATGTCAAAACTTTTGAGGAACGATGTATCGATGGCGCTTCAGAGAATAA AGCGTCTATTTGCATAATCGGTGACGAGATATCGGTGAAGTACATCGTGT GCCCGGTTTGACTTGTCGGCGACGCGACGATACTCAATTAGAGCTAGTCC TGCTGCTTCTGCAGTCGGCACAAGGAGATCGTCGAGAGCATGACGGTGGG AACGGTGCCGGTTCGAGACATGGGCGCGGTCGGGAAGGAGCTTGGTCGTC TGGAGGTCGTGCTGGAGAAGCAGGCCGCCGTGTCGGCCAAAGCCTCAGAG ATCAGCGACCTTGAAGAGGTATAGCGACGTGTGAGTTTCCCGCCTGTATT TCGCGCTGTTCTCTAAAGCCTTTCAAATACGGAGGGGAGTGTCTTGACAG AGTCAGCAGATGCCTTCGTCTCGACTTGAGACGTCTTCTCTCGGTTTGTC GTCCTTGACTTATATTCGGATTGTATCCCGGCGGCGATCTTGGACCTGCC GAACCATCTCCTGATTTTCGTGCAATATGTTAAGGTTATGGGACTAAGCA ATGCCGCTGGCGTGGAAACAGACCGAGAAATGTATTCCATCGCGAAGGAG GAGCGCCAGGAGTGCGTCAGCGTCTTAGAAAGCCTGCGACTGGAGCTCAC GAGTCTACTGCTGCCCCGGTGTGTTTCACCGTCGGATTATTAATAATGTG GCTCCCAAGCGTCACGGATCAGCACCTATTGCCTCTACAGTAGTTCCATG TCTGAAACCCGGAACTTTTTTGTAGTATGGCCAGGTTTATAATATCTACC TTGGTATTTACTTTGCATCCCCCTCCTCTTGGAGGCATCTAGACAAGCGC AAAACCTGACTAGAGCGCGCGCACTTGCTGCGTACGTTCGCGCTGGGAAA AGGGACGAAGCGGACTCCAAGAACGCCCTCTTGGAAGTCCGAAGTGGCAC CGGGGGCGACGAGGCAGCGATGTTTGCCAGGGATCTTTTCGAGATGTACA GACGCTTCGCGGAGCTGAAGGGCTGGCAGTTCGAGGGGCTGCACTGCAGC ACCATAGACGTGGGTGAGCGCGAAGGGTATAAACAATGTCTCAAATCCTG CGCAAAAAAATATGTCGGGGTTCGAGTTTGATACCATGGTCGGGAGCGTG ACGTGTGAGCTCTGTCTCTGTAGTTACCTTGCGCACACACCCGCACAAGT ATCCGGAATGCTCGGTTGAAGATGTAAAGCGGTAACGAGTGGTCTCTTGT AGCCCTTGTGGGTGGCATTGTTGCGTTTCTTGTGGCTATCGAACCATTCA TCCCAGAGTCCTCAACACCAAGATCAAGCTCTGTGGTGGCGTGGTCCTCT TTTGCTTCCCAGGGGGGTACAGGGAAGCAACGGCATCGATCCGTGGAGAG GACGTGTACGGGTCACTCAAGTACGAAAACGGGGTCCACCGGGTATGTGG TCAGTGAAATATATATATAAAAAAGCGGGGCCTCTGCTGACGCTGAACAC CGTGTACCACGGGCGCTCTTTTTGTGTGAACCCTCTCGGTCGCTCAGATC GGTCGCGTTTTTTGTTCGAAGTTAGCGCCTAGGTAGGAATCGCGAGGGTA GCGAGCTCTAGCGATGCGGTACCGTGTTCAAATCGAATGGTACTGGATCA AATTTGCCCTCAGCTGTGTTCGAGAGTAAGAATATATCTTGGTCCATATT TTTCGCCCTTTGGTGTGCGGACGGACGCCGCGGCTGGGTGTTTTTGCGCC CTCGCAGGTTCAGAGGGTCCCGTCGAACTCCACGCGCCTGCACACGAGCG CGGCATCAGTGGTGGTGATGATGGAAGCGGAG
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Coding sequence (CDS) from alignment at H-elongata_contig86086:449..2730+

>mRNA_H-elongata_contig86086.16185.1 ID=mRNA_H-elongata_contig86086.16185.1|Name=mRNA_H-elongata_contig86086.16185.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1332bp|location=Sequence derived from alignment at H-elongata_contig86086:449..2730+ (Himanthalia elongata Himel1 dioecious)
TCTTCAGAGGAAGCTGCGTGGTTGCCTTCCAGCATGAGAGAGAGACTGGA
GCAGATGAAAGGTCTTCAGAGGAAGCTGCGTGGTTGCCTTCCAGCATGAG
AGAGAGACTGGAGCAGATGAAAGGTCGGCACAAGGAGATCGTCGAGAGCA
TGACGGTGGGAACGGTGCCGGTTCGAGACATGGGCGCGGTCGGGAAGGAG
CTTGGTCGTCTGGAGGTCGTGCTGGAGAAGCAGGCCGCCGTGTCGGCCAA
AGCCTCAGAGATCAGCGACCTTGAAGAGTCGGCACAAGGAGATCGTCGAG
AGCATGACGGTGGGAACGGTGCCGGTTCGAGACATGGGCGCGGTCGGGAA
GGAGCTTGGTCGTCTGGAGGTCGTGCTGGAGAAGCAGGCCGCCGTGTCGG
CCAAAGCCTCAGAGATCAGCGACCTTGAAGAGGTTATGGGACTAAGCAAT
GCCGCTGGCGTGGAAACAGACCGAGAAATGTATTCCATCGCGAAGGAGGA
GCGCCAGGAGTGCGTCAGCGTCTTAGAAAGCCTGCGACTGGAGCTCACGA
GTCTACTGCTGCCCCGGTTATGGGACTAAGCAATGCCGCTGGCGTGGAAA
CAGACCGAGAAATGTATTCCATCGCGAAGGAGGAGCGCCAGGAGTGCGTC
AGCGTCTTAGAAAGCCTGCGACTGGAGCTCACGAGTCTACTGCTGCCCCG
GGACGAAGCGGACTCCAAGAACGCCCTCTTGGAAGTCCGAAGTGGCACCG
GGGGCGACGAGGCAGCGATGTTTGCCAGGGATCTTTTCGAGATGTACAGA
CGCTTCGCGGAGCTGAAGGGCTGGCAGTTCGAGGGGCTGCACTGCAGCAC
CATAGACGTGGGGACGAAGCGGACTCCAAGAACGCCCTCTTGGAAGTCCG
AAGTGGCACCGGGGGCGACGAGGCAGCGATGTTTGCCAGGGATCTTTTCG
AGATGTACAGACGCTTCGCGGAGCTGAAGGGCTGGCAGTTCGAGGGGCTG
CACTGCAGCACCATAGACGTGGGGGGGTACAGGGAAGCAACGGCATCGAT
CCGTGGAGAGGACGTGTACGGGTCACTCAAGTACGAAAACGGGGTCCACC
GGGGGGGTACAGGGAAGCAACGGCATCGATCCGTGGAGAGGACGTGTACG
GGTCACTCAAGTACGAAAACGGGGTCCACCGGGTTCAGAGGGTCCCGTCG
AACTCCACGCGCCTGCACACGAGCGCGGCATCAGTGGTGGTGATGATGGA
AGCGGAGGTTCAGAGGGTCCCGTCGAACTCCACGCGCCTGCACACGAGCG
CGGCATCAGTGGTGGTGATGATGGAAGCGGAG
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