mRNA_H-elongata_contig85994.16179.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig85994.16179.1
Unique NamemRNA_H-elongata_contig85994.16179.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Match: A0A6H5KVF6_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF6_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 7.580e-35
Identity = 103/321 (32.09%), Postives = 149/321 (46.42%), Query Frame = 1
Query:   10 LQDYVQFATPRKILTAGGALLNDTGEGVLQGLVTNDYGDKIIVWWLDIVVVPEIGCNLFSVITAAKKSIVTIFDLKKNRVERFNVTVPLRSESGNLYSSVLDLSADGY----GTKELA----------MNAVA----NAQVWHRRLGHLHAQSLDILRKRYVTGITFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTP------------------------------------SLHLFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEFAATNPPQQIGVSERVGRTLSAMVRYML 810
            L DY Q  +P+ +  AG   L  T  G+L   V ++ G ++ V  +  ++VP +G N+FS  +  K+ +  + +     +      +PL  +  +     LD++ +      GTK L            NAV     +A  WHRRLGHL+A+SLDILRK   T + +   +S  GVC + K +Q  HPK +  +++RP QL   D MG   P                                    ++H +        G RI     DKGGE TG EFR YC  + I  E+AATN PQQIGVSER G+TL+ + R +L
Sbjct:  229 LHDYTQRNSPKIVDVAGERQLKGTATGILHCTVKDNRGQQLRVR-IQGLIVPGLGRNIFSPTSLLKRGLRCVGEKSTPHLTIQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTEVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKVTDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLL 548          
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Match: A0A6H5K1J1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J1_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 2.030e-33
Identity = 84/211 (39.81%), Postives = 113/211 (53.55%), Query Frame = 1
Query:  283 ESGNLYSSVLDLSADGYGTKELAMNA--VANAQVWHRRLGHLHAQSLDILRKRYVTGITFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTP---------------------------------SLHLFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEFAATNPPQQIGVSERVGRTLSAMVRYML 810
            E   LY   +DL   G    E++  A  V +A +WHRR+GH+H +SLDILRK    G+ + G++S   VCAVG ++Q  HPK  ++  +RPFQL   DLMG F+P                                 +L LF  S + P   R+    ADKGGEYT   F +YC + GI   FA+TN PQ+IG +ER+GRTL+ MVR +L
Sbjct:  239 ECDELYHFTMDLPETG----EISGVALPVKSAALWHRRVGHVHGRSLDILRKVQGNGVEYNGELSACDVCAVGNSKQQNHPKRASYDASRPFQLVTTDLMGPFSPPALGGFLYIKKFVDQHIKWNEVFLMKEKSATVDALQLFNQSVLTPHELRLECVRADKGGEYTSWAFCKYCRDVGIKLLFASTNTPQRIGANERIGRTLAGMVRCLL 445          
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 129 bits (325), Expect = 2.470e-30
Identity = 102/328 (31.10%), Postives = 150/328 (45.73%), Query Frame = 1
Query:   10 LQDYVQFATPRKILTAGGALLNDTGEGVLQGLVTNDYGDKIIVWWLDIVVVPEIGCNLFSVITAAKKSIVTIFDLKKNRVERFNVTVPLRSESGNLYSSVLDLSADGY----GTKELA----------MNAVA----NAQVWHRRLGHLHAQSLDILRKRYVTGITFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTP------------------------------------SLHLFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEF-------AATNPPQQIGVSERVGRTLSAMVRYML 810
            L DY Q  +P+ +  AGG  L  T  G+L   V ++ G ++ V  +   +VP +G N+FS  +  KK +  + +     +      +PL  +  +     LD++ +      GTK L            NAV     +A  WHRRLGHL+A+SLDILRK   TG+ +   +S  GVC + K +Q  HPK +  +++RP QL     MG   P                                    ++H +    V   G RI     DKGGE TG     +   +G++QEF       AATN PQQ+GVSER G+TL+ ++R +L
Sbjct:  194 LHDYTQRNSPKIVGVAGGRQLKGTATGILHCTVKDNRGQQLRVR-IQGFIVPGLGRNIFSPTSLLKKGLRCVVEESTPHLTFQGKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIGNMGPVNPPAKYKGGSFPYVRKITDDYTKMKKVYLLRKKSDTTEAVHTYNMCVVAAGGYRIETIRCDKGGENTG-----WIRISGLLQEFSYIKLEFAATNTPQQVGVSERDGQTLAGVIRCLL 515          
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Match: A0A6H5KT84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT84_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 1.410e-29
Identity = 98/312 (31.41%), Postives = 140/312 (44.87%), Query Frame = 1
Query:   70 LNDTGEGVLQGLVTNDYGDKIIVWWLDIVVVPEIGCNLFSVITAA-----------KKSIVTIFDLKKNRVERFNVTVPLRSESGNLYSSVLDLSADGY----GTKELA----------MNAVA----NAQVWHRRLGHLHAQSLDILRKRYVTGITFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTP------------------------------------SLHLFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEFAATNPPQQIGVSERVGRTLSAMVRYML 810
            L  T  G+L   V ++ G ++ V  +  ++VP +G N+FS  T             KK +  + +     +   +  +PL  +  +     LD++ +      GTK L            NAV     +A  WHRRLGHL+A+SLDILRK   TG+ +   +S  GVC + K +Q  HPK +  +++RP QL   D MG   P                                    ++H +        G RI     DKGGE TG EFR YC  + I  E+AATN PQQIG SER G+TL+ + R +L
Sbjct:  290 LKGTATGILHCTVKDNRGQQLRVR-IQGLIVPGLGRNIFSSRTLLLGMDFSPTSLLKKGLRCVVEESTPHLTIQDKVIPLTQDPRDQGMCTLDITFEQNVQPSGTKSLVPHQKQSQTHTANAVCFTLVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTREISRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGASERDGQTLAGVTRCLL 600          
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Match: A0A6H5KW84_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW84_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 5.100e-29
Identity = 95/301 (31.56%), Postives = 142/301 (47.18%), Query Frame = 1
Query:   34 TPRKILTAGGALLNDTGEGVLQGLVTNDYGDKIIVWWLDIVVVPEIGCNLFSVITAAKKSIVTIFDLKKNRVE-RFNVTVPLRSESGNLYSSVLDLSADG---------------------------------YGTKELAMNAVANAQVWHRRLGHLHAQSLDILRKRYVTGITFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTP--------SLHLFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEFAATNPPQQIGVSERVGRTLSAMVRYML 810
            TP+ I  AG + L  T  G+L   + +D   ++ V       +  +G N+F+     KK +  + + K   +     V VPL+ E+ +     L ++  G                                 + T  +AM+   +A +WHRRLGH++  +++ILR    TG+ ++G VS    C + K ++   PK T+  + +P QL   D MG   P        +LH +    V   G RI     DKGGE TGEE R YC E+ I  EFAATN PQ+IGVSER G+TL+A+ R +L
Sbjct:   91 TPKIIDVAGESQLRGTTTGILHCTIKDDKEQQLPVK------LQGLGRNIFAPTALLKKGLRCVLEDKTPHLTIGGEVVVPLKQETQDQGMCTLAITFKGDPASTSKTPRNNQEPGRQPKFGKPEAVQIDHTPHATCSVAMSV--SADLWHRRLGHINPSAMEILRCNPATGVKYDGPVSPCDNCQITKHKKAPVPKKTSRVLTKPGQLVQFDNMGPIDPPAKTETTQALHAY-NMQVASEGYRIEVLPCDKGGENTGEEMRNYCRESAIKLEFAATNTPQEIGVSERDGQTLAAVTRALL 382          
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Match: A0A6H5KZ34_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ34_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 5.150e-29
Identity = 71/186 (38.17%), Postives = 93/186 (50.00%), Query Frame = 1
Query:  361 VANAQVWHRRLGHLHAQSLDILRKRYVTGITFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTP------------------------------------SLHLFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEFAATNPPQQIGVSERVGRTLSAMVRYML 810
            + +A  WHRRLGHL+A+SLDILRK   TG+ +   +S  GVC + K +Q  HPK +  +++RP QL   D MG   P                                    ++H +        G RI     DKGGE TG EFR YC  + I  E+AATN PQQIGVSE  G+TL+ + R +L
Sbjct:   39 LVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSEGDGQTLAGVTRCLL 224          
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Match: A0A6H5K500_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K500_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.180e-27
Identity = 72/186 (38.71%), Postives = 94/186 (50.54%), Query Frame = 1
Query:  361 VANAQVWHRRLGHLHAQSLDILRKRYVTGITFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTP------------------------------------SLHLFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEFAATNPPQQIGVSERVGRTLSAMVRYML 810
            + +A  WHRRLGHL+A+SLDILRK   TG+ +   +S  GVC + K +Q  HPK +  +++RP QL   D MG   P                                    ++H +        G RI     DKGGE TG EFR YC  + I  E+AATN PQQIGVSER G+TL+ + R +L
Sbjct:   39 LVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLL 224          
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.300e-27
Identity = 72/186 (38.71%), Postives = 94/186 (50.54%), Query Frame = 1
Query:  361 VANAQVWHRRLGHLHAQSLDILRKRYVTGITFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTP------------------------------------SLHLFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEFAATNPPQQIGVSERVGRTLSAMVRYML 810
            + +A  WHRRLGHL+A+SLDILRK   TG+ +   +S  GVC + K +Q  HPK +  +++RP QL   D MG   P                                    ++H +        G RI     DKGGE TG EFR YC  + I  E+AATN PQQIGVSER G+TL+ + R +L
Sbjct:   39 LVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLL 224          
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Match: A0A6H5KCT3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCT3_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 1.320e-27
Identity = 72/186 (38.71%), Postives = 94/186 (50.54%), Query Frame = 1
Query:  361 VANAQVWHRRLGHLHAQSLDILRKRYVTGITFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTP------------------------------------SLHLFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEFAATNPPQQIGVSERVGRTLSAMVRYML 810
            + +A  WHRRLGHL+A+SLDILRK   TG+ +   +S  GVC + K +Q  HPK +  +++RP QL   D MG   P                                    ++H +        G RI     DKGGE TG EFR YC  + I  E+AATN PQQIGVSER G+TL+ + R +L
Sbjct:   39 LVSADTWHRRLGHLNARSLDILRKDTGTGVDYRDSLSPCGVCQIAKHKQSPHPKQSTRELSRPGQLVVIDNMGPVNPPAKYKGGSFPYACKITDDYTKMKEVYLLRKKSDTTEAVHTYNMCVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLL 224          
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Match: A0A6H5JRJ1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRJ1_9PHAE)

HSP 1 Score: 121 bits (303), Expect = 2.380e-27
Identity = 72/186 (38.71%), Postives = 94/186 (50.54%), Query Frame = 1
Query:  361 VANAQVWHRRLGHLHAQSLDILRKRYVTGITFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTP------------------------------------SLHLFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEFAATNPPQQIGVSERVGRTLSAMVRYML 810
            + +A  WHRRLGHL+A+SLDILRK   TG+ F   +S  GVC + K +Q  HPK +  +++RP QL   D +G   P                                    ++H +        G RI     DKGGE TG EFR YC  + I  E+AATN PQQIGVSER G+TL+ + R +L
Sbjct:   39 LVSADTWHRRLGHLNARSLDILRKDTGTGVDFRDSLSPCGVCQIAKYKQSPHPKQSTRELSRPGQLVVIDNVGPVNPPAKYNGGSFPYACKITDDYTKVKEVYLLRKKSNTTEAVHTYNICVAAAGGYRIETIRCDKGGENTGSEFRDYCKNSAIKLEYAATNTPQQIGVSERDGQTLAGVTRCLL 224          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85994.16179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KVF6_9PHAE7.580e-3532.09Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K1J1_9PHAE2.030e-3339.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMG5_9PHAE2.470e-3031.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KT84_9PHAE1.410e-2931.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KW84_9PHAE5.100e-2931.56Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZ34_9PHAE5.150e-2938.17Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5K500_9PHAE1.180e-2738.71Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JJR8_9PHAE1.300e-2738.71Integrase catalytic domain-containing protein n=11... [more]
A0A6H5KCT3_9PHAE1.320e-2738.71Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRJ1_9PHAE2.380e-2738.71Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85994contigH-elongata_contig85994:1803..2711 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score89.7
Seed ortholog evalue2.2e-15
Seed eggNOG ortholog4081.Solyc12g070160.1.1
EggNOG free text desc.GAG-pre-integrase domain
EggNOG OGs37PMN@33090,3GRM0@35493,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons2
Model size810
Cds size810
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931263.3064272-CDS-H-elongata_contig85994:1802..23931622931263.3064272-CDS-H-elongata_contig85994:1802..2393Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85994 1803..2393 +
1691679764.8333464-CDS-H-elongata_contig85994:1802..23931691679764.8333464-CDS-H-elongata_contig85994:1802..2393Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85994 1803..2393 +
1622931263.3249907-CDS-H-elongata_contig85994:2492..27111622931263.3249907-CDS-H-elongata_contig85994:2492..2711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85994 2493..2711 +
1691679764.8462822-CDS-H-elongata_contig85994:2492..27111691679764.8462822-CDS-H-elongata_contig85994:2492..2711Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85994 2493..2711 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85994.16179.1prot_H-elongata_contig85994.16179.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig85994 1803..2711 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig85994.16179.1

>prot_H-elongata_contig85994.16179.1 ID=prot_H-elongata_contig85994.16179.1|Name=mRNA_H-elongata_contig85994.16179.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=270bp
KHRLQDYVQFATPRKILTAGGALLNDTGEGVLQGLVTNDYGDKIIVWWLD
IVVVPEIGCNLFSVITAAKKSIVTIFDLKKNRVERFNVTVPLRSESGNLY
SSVLDLSADGYGTKELAMNAVANAQVWHRRLGHLHAQSLDILRKRYVTGI
TFEGDVSDGGVCAVGKAQQFVHPKTTNHKVNRPFQLCYGDLMGSFTPSLH
LFVGSTVIPFGGRIVRWCADKGGEYTGEEFRQYCLETGIIQEFAATNPPQ
QIGVSERVGRTLSAMVRYML
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mRNA from alignment at H-elongata_contig85994:1803..2711+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig85994.16179.1 ID=mRNA_H-elongata_contig85994.16179.1|Name=mRNA_H-elongata_contig85994.16179.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=909bp|location=Sequence derived from alignment at H-elongata_contig85994:1803..2711+ (Himanthalia elongata Himel1 dioecious)
AAGCACCGTCTGCAGGACTACGTGCAGTTCGCTACGCCCCGCAAGATTCT CACTGCAGGGGGGGCTCTGCTGAACGATACGGGGGAAGGCGTGCTGCAAG GACTTGTCACCAACGACTACGGTGACAAAATTATCGTTTGGTGGCTCGAT ATCGTGGTGGTGCCCGAAATTGGGTGCAACCTGTTCTCGGTGATAACAGC AGCCAAAAAGAGCATTGTCACCATCTTCGACTTAAAAAAAAACAGAGTGG AGAGATTCAACGTCACCGTGCCGCTACGGAGCGAGAGCGGCAACCTCTAC TCCTCCGTGCTGGACTTGAGTGCGGACGGATATGGCACCAAGGAGCTAGC AATGAACGCAGTCGCCAATGCCCAGGTGTGGCACCGACGGCTGGGTCATC TCCATGCGCAGAGCCTGGATATTCTACGCAAGCGATACGTCACTGGCATC ACCTTCGAGGGGGACGTCTCGGACGGCGGCGTTTGCGCCGTGGGGAAGGC TCAACAGTTTGTTCATCCCAAGACGACCAATCACAAGGTCAACCGGCCTT TCCAGCTGTGCTACGGAGACCTGATGGGGTCCTTCACGCCTGTGGCCATA GGCGTCTACAAGTACGCCAGCAAAATAACCGACGAGTACACAAAGTGGAC CGACGTCTAATTGTTGACTACTAAGGACCGAGCTCTTCAGTCGCTTCATC TGTTCGTCGGCTCGACAGTCATTCCCTTCGGCGGCCGCATCGTTCGTTGG TGCGCCGACAAGGGCGGCGAGTACACCGGGGAGGAGTTCCGGCAGTACTG CTTGGAGACCGGTATTATCCAAGAGTTTGCCGCAACCAACCCGCCACAGC AAATCGGTGTGTCCGAACGAGTGGGGAGGACTCTGAGCGCGATGGTTCGG TACATGCTC
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Coding sequence (CDS) from alignment at H-elongata_contig85994:1803..2711+

>mRNA_H-elongata_contig85994.16179.1 ID=mRNA_H-elongata_contig85994.16179.1|Name=mRNA_H-elongata_contig85994.16179.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1620bp|location=Sequence derived from alignment at H-elongata_contig85994:1803..2711+ (Himanthalia elongata Himel1 dioecious)
AAGCACCGTCTGCAGGACTACGTGCAGTTCGCTACGCCCCGCAAGATTCT
CACTGCAGGGGGGGCTCTGCTGAACGATACGGGGGAAGGCGTGCTGCAAG
GACTTGTCACCAACGACTACGGTGACAAAATTATCGTTTGGTGGCTCGAT
ATCGTGGTGGTGCCCGAAATTGGGTGCAACCTGTTCTCGGTGATAACAGC
AGCCAAAAAGAGCATTGTCACCATCTTCGACTTAAAAAAAAACAGAGTGG
AGAGATTCAACGTCACCGTGCCGCTACGGAGCGAGAGCGGCAACCTCTAC
TCCTCCGTGCTGGACTTGAGTGCGGACGGATATGGCACCAAGGAGCTAGC
AATGAACGCAGTCGCCAATGCCCAGGTGTGGCACCGACGGCTGGGTCATC
TCCATGCGCAGAGCCTGGATATTCTACGCAAGCGATACGTCACTGGCATC
ACCTTCGAGGGGGACGTCTCGGACGGCGGCGTTTGCGCCGTGGGGAAGGC
TCAACAGTTTGTTCATCCCAAGACGACCAATCACAAGGTCAACCGGCCTT
TCCAGCTGTGCTACGGAGACCTGATGGGGTCCTTCACGCCTAAGCACCGT
CTGCAGGACTACGTGCAGTTCGCTACGCCCCGCAAGATTCTCACTGCAGG
GGGGGCTCTGCTGAACGATACGGGGGAAGGCGTGCTGCAAGGACTTGTCA
CCAACGACTACGGTGACAAAATTATCGTTTGGTGGCTCGATATCGTGGTG
GTGCCCGAAATTGGGTGCAACCTGTTCTCGGTGATAACAGCAGCCAAAAA
GAGCATTGTCACCATCTTCGACTTAAAAAAAAACAGAGTGGAGAGATTCA
ACGTCACCGTGCCGCTACGGAGCGAGAGCGGCAACCTCTACTCCTCCGTG
CTGGACTTGAGTGCGGACGGATATGGCACCAAGGAGCTAGCAATGAACGC
AGTCGCCAATGCCCAGGTGTGGCACCGACGGCTGGGTCATCTCCATGCGC
AGAGCCTGGATATTCTACGCAAGCGATACGTCACTGGCATCACCTTCGAG
GGGGACGTCTCGGACGGCGGCGTTTGCGCCGTGGGGAAGGCTCAACAGTT
TGTTCATCCCAAGACGACCAATCACAAGGTCAACCGGCCTTTCCAGCTGT
GCTACGGAGACCTGATGGGGTCCTTCACGCCTTCGCTTCATCTGTTCGTC
GGCTCGACAGTCATTCCCTTCGGCGGCCGCATCGTTCGTTGGTGCGCCGA
CAAGGGCGGCGAGTACACCGGGGAGGAGTTCCGGCAGTACTGCTTGGAGA
CCGGTATTATCCAAGAGTTTGCCGCAACCAACCCGCCACAGCAAATCGGT
GTGTCCGAACGAGTGGGGAGGACTCTGAGCGCGATGGTTCGGTACATGCT
CTCGCTTCATCTGTTCGTCGGCTCGACAGTCATTCCCTTCGGCGGCCGCA
TCGTTCGTTGGTGCGCCGACAAGGGCGGCGAGTACACCGGGGAGGAGTTC
CGGCAGTACTGCTTGGAGACCGGTATTATCCAAGAGTTTGCCGCAACCAA
CCCGCCACAGCAAATCGGTGTGTCCGAACGAGTGGGGAGGACTCTGAGCG
CGATGGTTCGGTACATGCTC
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