mRNA_H-elongata_contig85902.16172.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig85902.16172.1
Unique NamemRNA_H-elongata_contig85902.16172.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Match: A0A6H5JPB2_9PHAE (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPB2_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 2.830e-113
Identity = 175/236 (74.15%), Postives = 203/236 (86.02%), Query Frame = 1
Query:    1 AVPAAEEMRKRAARYRETPKDTTDQEISAQMKGLHVDDDMAMFDKIFEPYPVAIGKAISKMERCDTKRNDDSTLVYGEITFKTLALALHKVRTKYGLPGVGSSGEKGVLQD-KGGAFYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILKQWEGGIRDRVEH-QPPTRVKFVHGDALDLSICDWSDGDVVFANSTCFDDALMWKLASAATALKKGAIFITLTRRMPVS 702
            A  A EEMRKRAARYRETPK+ TD +++AQM+GL VD  MA++DK+FE +PVAIGKAISK ER +T ++ +STLVYGEITFKTLALALHKV+TKYGLPGVGSSG  GVLQ+  GGAFYDIGSGTGKPV AAAI HPFHKAVGIEILEGL++TS E+LK W+GGIRDRV H Q  T+V+F  GDALD+++CDWSD  VVFANSTCFDD LM +LASAATALKKG IFITLT+R+P +
Sbjct:   59 ATEAMEEMRKRAARYRETPKEDTD-DLTAQMEGLQVDSKMALYDKLFEAHPVAIGKAISKTERDETDQSGNSTLVYGEITFKTLALALHKVKTKYGLPGVGSSGPAGVLQEGSGGAFYDIGSGTGKPVFAAAILHPFHKAVGIEILEGLYSTSRELLKAWDGGIRDRVGHGQERTKVEFFLGDALDMNVCDWSDATVVFANSTCFDDTLMRRLASAATALKKGTIFITLTKRLPAA 293          
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Match: A0A7S2RS53_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS53_9STRA)

HSP 1 Score: 208 bits (529), Expect = 1.130e-62
Identity = 104/209 (49.76%), Postives = 147/209 (70.33%), Query Frame = 1
Query:   88 QMKGLHVD---DDMAMFDKIFEPYPVAIGKAISKMERCDTKRNDDSTLVYGEITFKTLALALHKVRTKYGLPGVGSSGEKGVLQDKGGAFYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILKQWEGGIRDRVE---HQPPTRVKFVHGDALDLSICDWSDGDVVFANSTCFDDALMWKLASAATALKKGAIFITLTRRMP 696
            ++KG+ +D      A++D++ EP+P  +GK +SK ER +T +N  + LVYGEI F++  +A  K+++ YGLPG G++  +GVLQ  GG FYDIGSGTGKP IAAA+ HPF    G+EILEGL+ TS+++ +++    +  +        TRV+FVHGD  DL+  DW+DGDVVFANSTCFDD+LM  +A  A  +K G+IFITLT+R+P
Sbjct:   58 ELKGMAIDRVAQRKAIYDQVVEPFPTKVGKHVSKKERDETGKNQ-TNLVYGEINFESFGIAFEKIKSTYGLPGEGTTPVQGVLQAPGGIFYDIGSGTGKPAIAAAVLHPFESVGGVEILEGLYETSLQVAERFTAVGKPMLADAGETVETRVEFVHGDVTDLATLDWTDGDVVFANSTCFDDSLMQAVAKLAGGMKMGSIFITLTKRLP 265          
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Match: A0A836CL60_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL60_9STRA)

HSP 1 Score: 205 bits (522), Expect = 2.140e-62
Identity = 122/244 (50.00%), Postives = 150/244 (61.48%), Query Frame = 1
Query:    1 AVPAAEEMRKRAARYRETPKDTTDQEISA------------QMKGLHVDDDMAMFDKIFEPYPVAIGKAISKMERCDTKRNDDSTLVYGEITFKTLALALHKVRTKYGLPGVGSSGEKGVLQDKGGAFYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILKQWEGGIRDRVEHQPPTRVKFVHGDALDLSICDWSDGDVVFANSTCFDDALMWKLASAATALKKGAIFITLTRRMP 696
            A+ A EEMRKRA RYRE P D  ++ ++A            +M  LH        DKIF  +P+A+GKAIS+ ER    +   STL YGE+TF  LA+AL K+R  +G   V  SGE G LQ+ GG F D+GSGTGK VIAAA+FH F    GIEILEGL+ TS+EI K W+   + R E      V F HGDA DL + DWS  DVVFANSTCF DALM  +A    +L+ GA  IT TR++P
Sbjct:   25 AIAAMEEMRKRAQRYREKPVDALEESLAALDLKEGGQGLVSRMHQLH--------DKIFIEHPIALGKAISRKERDHLGKAASSTLTYGEVTFDALAVALSKIRHVWGPKAV--SGEAGPLQEPGGVFVDLGSGTGKGVIAAALFHRFTACHGIEILEGLYKTSLEIKKSWDE--KHREEAGASATVNFWHGDATDLGVFDWSTADVVFANSTCFHDALMRSIADCCASLRVGAFVITFTRQLP 256          
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Match: A0A482SE85_9ARCH (DOT1 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SE85_9ARCH)

HSP 1 Score: 176 bits (447), Expect = 2.360e-51
Identity = 93/221 (42.08%), Postives = 137/221 (61.99%), Query Frame = 1
Query:   37 ARYRETPKDTTDQEISAQMKGLHVDDDMAMFDKIFEPYPVAIGKAISKMERCDTKRNDDSTLVYGEITFKTLALALHKVRTKYGLPGVGSSGEKGVLQDKGGAFYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILKQWEGGIRDRVE-HQPPTRVKFVHGDALDLSICDWSDGDVVFANSTCFDDALMWKLASAATALKKGAIFITLTRRMP 696
            ++  E P++    E+ +++  + V ++  ++D I + +P  +GKA+SK ER +    D + L+YGEI F TL L   K++  YG P  GSSG  G++Q +GG +YD+G+GTGK VIA+AI H F    GIE LEGL + S++ L  +    + R+   +  T  +F+HGD L     DW D DVVFANSTCFD  LM  +A  A  +KKG+ FIT+T+R+P
Sbjct:    2 SKIEEDPEEQKLAEMMSKLDMVSVLENKEIYDSIMQSFPTQLGKAVSKKEREELSLKDPN-LIYGEIVFDTLGLVFEKIKKVYGRPYQGSSGPSGIMQGRGGIYYDLGAGTGKGVIASAILHNFDVCYGIECLEGLFSLSLDALNSYNTRGKARLSMREHDTHCQFIHGDFLKPRTKDWRDADVVFANSTCFDTNLMMDIAKLAVGMKKGSFFITITKRLP 221          
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Match: A0A7S2X7Y4_9EUKA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X7Y4_9EUKA)

HSP 1 Score: 163 bits (413), Expect = 2.480e-46
Identity = 91/199 (45.73%), Postives = 121/199 (60.80%), Query Frame = 1
Query:  103 HVDDDMAMFDKIFEPYPVAIGKAISKMERCDTKRNDDSTLVYGEITFKTLALALHKVRTKYGLPGVGSSGEKGVLQDKGGAFYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILKQWEGGIRDRVEH-QPPTRVKFVHGDALDLSICDWSDGDVVFANSTCFDDALMWKLASAATALKKGAIFITLTRRMP 696
            H++    ++D +    PV+IGK  S  ER D KR   STLVYGEI F+   + + K++  YG            LQ  GG FYDIGSGTGKP  AAA+ H F KA G+EILEGLH  S+ +L++W   IR  +   +  T ++F+ GDA+     DWSD D+ FANSTCFD  LM +LA AA ++KK + FIT T+ +P
Sbjct:   35 HINTQQKIWDDLVVTTPVSIGKKASSKER-DEKRLGASTLVYGEIRFEPYGVTIEKIKKWYG-----------GLQKPGGVFYDIGSGTGKPTFAAALLHDFDKAYGVEILEGLHKISVTLLERWNKAIRPNLNKAKQETDIQFICGDAVAY---DWSDADLCFANSTCFDSKLMQQLAKAADSMKKDSFFITFTKELP 218          
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Match: A0A7S0DHI4_9EUKA (Histone-lysine N-methyltransferase, H3 lysine-79 specific (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DHI4_9EUKA)

HSP 1 Score: 158 bits (400), Expect = 8.920e-45
Identity = 93/201 (46.27%), Postives = 119/201 (59.20%), Query Frame = 1
Query:  103 HVDDDMAMFDKIFEPYPVAIGKAISKMERCDTKRNDDSTLVYGEITFKTLALALHKVRTKYGLPGVGSSGEKGVLQDKGGAFYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILKQWEGGIRDRVEHQPPTR---VKFVHGDALDLSICDWSDGDVVFANSTCFDDALMWKLASAATALKKGAIFITLTRRMP 696
            H+   M ++D++    PV+IGK  S  ER D K+   STLVYGEI F+   + + K++  YG            L+  GG FYDIGSGTGKP  AAA+ H F KA G+EILEGL   S  +L +W+  IR  +    P R   VKF H DA   +  DWSD D+ FANSTCFD  LM +LA AA ++KKG  FIT T+ +P
Sbjct:   39 HIATQMKIWDELVMTTPVSIGKKASSKER-DEKQLGASTLVYGEIRFEPYGITIEKIKKWYG-----------GLKKSGGVFYDIGSGTGKPTFAAALLHDFDKACGVEILEGLWKISNTLLDRWDKAIRPNLPK--PKRDMDVKFFHSDA---TTHDWSDADLCFANSTCFDSKLMQQLAQAAHSMKKGTFFITFTKELP 222          
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Match: A0A7S2GDF8_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDF8_9STRA)

HSP 1 Score: 155 bits (391), Expect = 6.780e-44
Identity = 74/146 (50.68%), Postives = 101/146 (69.18%), Query Frame = 1
Query:  262 LHKVRTKYGLPGVGSSGEKGVLQDKGGAFYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILKQWEGGIRDRVEHQPPT-RVKFVHGDALDLSICDWSDGDVVFANSTCFDDALMWKLASAATALKKGAIFITLTRRMP 696
            L K++TKYG+ G  ++ ++G++Q  GG FYDIGSGTGKP IAAA+ HPF    G+EILEGLH++S E+   W     + +       R +F  GD  D+   DWS+G+++FANSTCFDDALM K+A  A  LKKG+IFIT T+++P
Sbjct:    1 LQKIKTKYGVAGQYANDDEGIMQKPGGVFYDIGSGTGKPAIAAALLHPFDLVSGVEILEGLHSSSQELAAVWNNTAHELLPGDAIIPRAEFTLGDGTDMGCLDWSNGNLIFANSTCFDDALMEKIADKAALLKKGSIFITFTKKLP 146          
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Match: A0A2R5GI67_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GI67_9STRA)

HSP 1 Score: 157 bits (398), Expect = 1.310e-43
Identity = 89/197 (45.18%), Postives = 118/197 (59.90%), Query Frame = 1
Query:  124 MFDKIFEPYPVAIGKAISKMERCDTKRNDDSTLVYGEITFKTLALALHKVRTKYGLPGVGSSGEKGVLQDKGGAFYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILKQWE------GGIRDRVEHQPPTRVKFVHGDALDLSICDWSDGDVVFANSTCFDDALMWKLASAATALKKGAIFITLTRRMP 696
            +F KI   YP AIGKA+SK ER D    + S LVYGEI F+T ALAL K+R KYG            L + GG F D+GSG+GKPV AA + H F + +GIEIL GLH  S ++   W       GGI +++     T+++F+ GD  ++   DWSD  + F NSTCFDD +M +L   A  +K G+ FI+ TRR+P
Sbjct:   88 IFKKICGHYPAAIGKAVSKKERQDDALEEQS-LVYGEIQFRTFALALEKIRHKYG-----------GLSEPGGIFVDVGSGSGKPVFAAMLMHEFDRVIGIEILTGLHELSRDMEAIWHERKHKIGGITEKMSK---TQIEFIRGDIFNV---DWSDATLAFVNSTCFDDEMMNRLVEPADKMKPGSFFISFTRRIP 266          
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Match: A0A6T7BPQ5_9STRA (Histone-lysine N-methyltransferase, H3 lysine-79 specific n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A6T7BPQ5_9STRA)

HSP 1 Score: 150 bits (379), Expect = 2.530e-42
Identity = 70/120 (58.33%), Postives = 89/120 (74.17%), Query Frame = 1
Query:  346 FYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILKQWEGGIRDRVE---HQPPTRVKFVHGDALDLSICDWSDGDVVFANSTCFDDALMWKLASAATALKKGAIFITLTRRMP 696
            FYDIGSGTGKP +AAA+ HPF +  G+EILEGL+ TS+++   WE   ++ +E    +  T + F HGDA D  +CDWSDGDV+FANSTCFDDALM K+A  A  LKKGA+FIT T+R+P
Sbjct:    2 FYDIGSGTGKPAVAAALLHPFERVHGVEILEGLYRTSLDLAATWETRGKEILEAAGQEHATEIGFTHGDATDPEVCDWSDGDVLFANSTCFDDALMKKVAGQAVTLKKGAVFITFTKRLP 121          
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Match: F0XWY6_AURAN (DOT1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWY6_AURAN)

HSP 1 Score: 145 bits (367), Expect = 7.750e-39
Identity = 91/221 (41.18%), Postives = 121/221 (54.75%), Query Frame = 1
Query:   76 EISAQMKGLHVDDDMAMFDKIFEPYPVAIGKAISKMERCDTKRNDDSTLVYGEITFKT----------LALALHKVRTKYGLPGVGSSGEKGVLQDKG-GAFYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILKQWEG---GIRDRVEHQPPTRVKFVHGDALDLSICDWSDGDVVFANSTCFDDALMWKLASAATALKKGAIFITLTRRMP 696
            E SA      +++   +++ IF  +P   GK ISK ER D +  + S+LVYGEI F +             AL K++  YG PGVG+SG+ GV+Q  G G FYD+GSG GKP +AAA    F    G+E L GL   S +    +E     +   +    P  V F   D  DL   DWS GDVVFANSTCFDD ++  +A  A  LK+GA FIT T+++P
Sbjct:   35 EASASPSDAALEEPRRVYEAIFGRWPATHGKIISKRER-DARGMNASSLVYGEINFASSGAAKGRDASFGAALLKIKAVYGRPGVGASGDGGVMQAPGSGVFYDLGSGAGKPAVAAATLFEFEACRGVEYLGGLVRASRDAKAAYEEVGVPLLASLGRTGPA-VDFYEADVTDLGAHDWSGGDVVFANSTCFDDGMLAAVARRAARLKRGAFFITFTKKLP 253          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85902.16172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JPB2_9PHAE2.830e-11374.15Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2RS53_9STRA1.130e-6249.76Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A836CL60_9STRA2.140e-6250.00Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A482SE85_9ARCH2.360e-5142.08DOT1 domain-containing protein n=1 Tax=archaeon Ta... [more]
A0A7S2X7Y4_9EUKA2.480e-4645.73Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S0DHI4_9EUKA8.920e-4546.27Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A7S2GDF8_9STRA6.780e-4450.68Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2R5GI67_9STRA1.310e-4345.18Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
A0A6T7BPQ5_9STRA2.530e-4258.33Histone-lysine N-methyltransferase, H3 lysine-79 s... [more]
F0XWY6_AURAN7.750e-3941.18DOT1 domain-containing protein n=1 Tax=Aureococcus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85902contigH-elongata_contig85902:99..2244 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score337.4
Seed ortholog evalue5.1e-90
Seed eggNOG ortholog2880.D8LS74
EggNOG free text desc.Histone methylation protein DOT1
EggNOG OGs2BR00@1,2S3F7@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons6
Model size702
Cds size681
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931262.3777428-CDS-H-elongata_contig85902:98..2801622931262.3777428-CDS-H-elongata_contig85902:98..280Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 99..280 -
1691679764.3835614-CDS-H-elongata_contig85902:98..2801691679764.3835614-CDS-H-elongata_contig85902:98..280Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 99..280 -
1622931262.3983347-CDS-H-elongata_contig85902:517..6081622931262.3983347-CDS-H-elongata_contig85902:517..608Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 518..608 -
1691679764.4073374-CDS-H-elongata_contig85902:517..6081691679764.4073374-CDS-H-elongata_contig85902:517..608Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 518..608 -
1622931262.4188807-CDS-H-elongata_contig85902:911..9621622931262.4188807-CDS-H-elongata_contig85902:911..962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 912..962 -
1691679764.4246776-CDS-H-elongata_contig85902:911..9621691679764.4246776-CDS-H-elongata_contig85902:911..962Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 912..962 -
1622931262.4392467-CDS-H-elongata_contig85902:1221..14071622931262.4392467-CDS-H-elongata_contig85902:1221..1407Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 1222..1407 -
1691679764.4425273-CDS-H-elongata_contig85902:1221..14071691679764.4425273-CDS-H-elongata_contig85902:1221..1407Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 1222..1407 -
1622931262.4615786-CDS-H-elongata_contig85902:1759..18461622931262.4615786-CDS-H-elongata_contig85902:1759..1846Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 1760..1846 -
1691679764.4544485-CDS-H-elongata_contig85902:1759..18461691679764.4544485-CDS-H-elongata_contig85902:1759..1846Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 1760..1846 -
1622931262.4785097-CDS-H-elongata_contig85902:2139..22231622931262.4785097-CDS-H-elongata_contig85902:2139..2223Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 2140..2223 -
1691679764.4652152-CDS-H-elongata_contig85902:2139..22231691679764.4652152-CDS-H-elongata_contig85902:2139..2223Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85902 2140..2223 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931262.4954758-UTR-H-elongata_contig85902:2223..22441622931262.4954758-UTR-H-elongata_contig85902:2223..2244Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig85902 2224..2244 -
1691679764.475907-UTR-H-elongata_contig85902:2223..22441691679764.475907-UTR-H-elongata_contig85902:2223..2244Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig85902 2224..2244 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85902.16172.1prot_H-elongata_contig85902.16172.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig85902 99..2223 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig85902.16172.1

>prot_H-elongata_contig85902.16172.1 ID=prot_H-elongata_contig85902.16172.1|Name=mRNA_H-elongata_contig85902.16172.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=227bp
MRKRAARYRETPKDTTDQEISAQMKGLHVDDDMAMFDKIFEPYPVAIGKA
ISKMERCDTKRNDDSTLVYGEITFKTLALALHKVRTKYGLPGVGSSGEKG
VLQDKGGAFYDIGSGTGKPVIAAAIFHPFHKAVGIEILEGLHATSMEILK
QWEGGIRDRVEHQPPTRVKFVHGDALDLSICDWSDGDVVFANSTCFDDAL
MWKLASAATALKKGAIFITLTRRMPVS
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mRNA from alignment at H-elongata_contig85902:99..2244-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig85902.16172.1 ID=mRNA_H-elongata_contig85902.16172.1|Name=mRNA_H-elongata_contig85902.16172.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2146bp|location=Sequence derived from alignment at H-elongata_contig85902:99..2244- (Himanthalia elongata Himel1 dioecious)
GCCGTCCCAGCCGCAGAGGAGATGCGGAAGCGAGCGGCGAGATATCGGGA AACTCCGAAGGATACCACCGATCAAGAAATATCCGCGCAAATGAAAGGGC TCCATGTAAGGGATATAAATCGTTCTGGAGAAGGGGTGAGGGGGAGAGGA AGTCGAGGCGGAGGGAGGAAGTTGATATGTCGATGTTTCTTCGACGGGAA AGCCTCGCGGGGTTGAAAAGCTTCCACGCCTCAAGCGTCGAAAACATGGT GTGTAGTTTTCTGCCGTACTACTACAGTTGGTGGTCGGTCCCCAAAAAAG CAAGCAGTAGTAGCTCCCATGTCTTGGTGTGTATCCCGTGAAGCCTCCTC GAGGGTGTGGCGAGCGATGGTGTTGTCACTCGTGTTCTTCCGTTTCAGGT AGACGACGACATGGCGATGTTCGACAAGATTTTCGAGCCATACCCCGTCG CCATCGGAAAAGCCATCTCAAAGATGGAAAGGTGCGTGCGTCGAAGTGGC GTGAAATACGTCCCTCGAGGTTAAAGGGGATATTTGCGAACTGACTGCTG TTCACGCTCGAACGACCTCCGTGGTATCAGCAGAGTCTTAGGACCATATC TTCCTCCTTTCCGCCAGTCATGTCAGGCATGCAAGTACAATAGTGTGGAC TTTTCACTCCTTGCCCCCGCCCCCCGACCGTTGCAATCCTCTCGCGCGGC CCCACTCAGTATCACATCCAACCAACGTTACGTCGCTGACCGTGTGTTAA TCGTGCATCGTATCCTTTTTTTCGGTGGGGGGGGGGATGGGGGGGAATCG ATCGATGCTCGTCGCTGACGCGTGCATCGAAAGGGAGGACACGAAACGGA ACGACGACTCCACCTTGGTGTACGGGGAGATCACCTTCAAGACGCTAGCT CTTGCGCTGCACAAGGTCAGGACCAAGTACGGCTTGCCGGGGGTGGGCAG CTCCGGGGAAAAGGGGGTTCTCCAGGACAAAGGAGGGGCGTTCTACGACA TCGGTTCCGGCACGGGAAAGCCGGTGGGTTTTGACTGCCTTTTTTCCTCG CGAGTGTGGATGTTCAAGAATTAACCATCAACTCTTGAAATGGGTACACT AAATGAAAAACGAGCGAAATCCCATGAACATGAAAGCTGTGAAAGATGTG AAAGCTGGTAGGCGCAACACAGATGACACGTTCGCGTTTTTTGTCCCCGC CGCTTTTATTGCTTTTGTTGTTATCCTTTCATTTTCTCTCTATGTGTATA TATATATGTGTGTGTGTGTCCTTTTGGCGCAGGTAATCGCGGCCGCCATC TTCCATCCGTTCCACAAGGCGGTGGGAATCGAGGTGAGACGCGATCACTT CCTTGTTCCCCCGTCACTTCCCCATAGGAAGGAGCGAATTTGTTTAGAGA CCAACCAGGTGAGTTTGGCCTCTATCCTTTTGGGACAATATCCCCCCTCC CCGGCACAAAACCCCTCCGTCTTTCCGAGGAAACCTAGTCAGTGGTTCAA CAGCTAATGTATTCAAAGCTTGAGTACGCCTTCCTCTCCTCTCCCTTCCC CCCACCTTGCCCTTGCGTGTCGACATGTCTCTTGCGCGCGCCAAACGCGA ACCTTTATTACCCGACCGTGATGGTCGGTAGCGTAGATCCTGGAGGGGCT TCACGCGACGTCCATGGAGATTCTGAAGCAGTGGGAAGGAGGGATTCGGG ACAGGGTAGAACACCAACCACCCACGAGTGAGTGAAGTGTAACGCTGTCG CGGGTGAAAGACGCGAACGAGGCCCTCTATCTCAGCGAACCCGAGGAAGT GTTCTCTAGTGTAGCGCTGATTTCCGCTTGAAAAACCGCGCGCGGCAGCC GGACAGATACCAATTCCATCACAAAGAAACGCGTGCACGCTCGTGTGTGT CTGAGAGAGAAAGAGAGAGAGTTTAGTTGTGACTGATTGCTCGTCCCTCG TTTGCGGGGTTCAGGGGTGAAGTTCGTCCACGGTGACGCTCTTGACTTGA GCATTTGCGACTGGAGCGACGGGGACGTTGTGTTCGCCAACAGCACCTGC TTCGACGATGCTCTCATGTGGAAGCTAGCGAGCGCCGCGACTGCGCTGAA GAAGGGCGCCATCTTCATCACGCTGACCAGGCGGATGCCGGTGAGC
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Coding sequence (CDS) from alignment at H-elongata_contig85902:99..2244-

>mRNA_H-elongata_contig85902.16172.1 ID=mRNA_H-elongata_contig85902.16172.1|Name=mRNA_H-elongata_contig85902.16172.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1362bp|location=Sequence derived from alignment at H-elongata_contig85902:99..2244- (Himanthalia elongata Himel1 dioecious)
ATGCGGAAGCGAGCGGCGAGATATCGGGAAACTCCGAAGGATACCACCGA
TCAAGAAATATCCGCGCAAATGAAAGGGCTCCATATGCGGAAGCGAGCGG
CGAGATATCGGGAAACTCCGAAGGATACCACCGATCAAGAAATATCCGCG
CAAATGAAAGGGCTCCATGTAGACGACGACATGGCGATGTTCGACAAGAT
TTTCGAGCCATACCCCGTCGCCATCGGAAAAGCCATCTCAAAGATGGAAA
GGTGCGTAGACGACGACATGGCGATGTTCGACAAGATTTTCGAGCCATAC
CCCGTCGCCATCGGAAAAGCCATCTCAAAGATGGAAAGGTGCGACACGAA
ACGGAACGACGACTCCACCTTGGTGTACGGGGAGATCACCTTCAAGACGC
TAGCTCTTGCGCTGCACAAGGTCAGGACCAAGTACGGCTTGCCGGGGGTG
GGCAGCTCCGGGGAAAAGGGGGTTCTCCAGGACAAAGGAGGGGCGTTCTA
CGACATCGGTTCCGGCACGGGAAAGCCGGACACGAAACGGAACGACGACT
CCACCTTGGTGTACGGGGAGATCACCTTCAAGACGCTAGCTCTTGCGCTG
CACAAGGTCAGGACCAAGTACGGCTTGCCGGGGGTGGGCAGCTCCGGGGA
AAAGGGGGTTCTCCAGGACAAAGGAGGGGCGTTCTACGACATCGGTTCCG
GCACGGGAAAGCCGGTAATCGCGGCCGCCATCTTCCATCCGTTCCACAAG
GCGGTGGGAATCGAGGTAATCGCGGCCGCCATCTTCCATCCGTTCCACAA
GGCGGTGGGAATCGAGATCCTGGAGGGGCTTCACGCGACGTCCATGGAGA
TTCTGAAGCAGTGGGAAGGAGGGATTCGGGACAGGGTAGAACACCAACCA
CCCACGAATCCTGGAGGGGCTTCACGCGACGTCCATGGAGATTCTGAAGC
AGTGGGAAGGAGGGATTCGGGACAGGGTAGAACACCAACCACCCACGAGG
GTGAAGTTCGTCCACGGTGACGCTCTTGACTTGAGCATTTGCGACTGGAG
CGACGGGGACGTTGTGTTCGCCAACAGCACCTGCTTCGACGATGCTCTCA
TGTGGAAGCTAGCGAGCGCCGCGACTGCGCTGAAGAAGGGCGCCATCTTC
ATCACGCTGACCAGGCGGATGCCGGTGAGCGGGTGAAGTTCGTCCACGGT
GACGCTCTTGACTTGAGCATTTGCGACTGGAGCGACGGGGACGTTGTGTT
CGCCAACAGCACCTGCTTCGACGATGCTCTCATGTGGAAGCTAGCGAGCG
CCGCGACTGCGCTGAAGAAGGGCGCCATCTTCATCACGCTGACCAGGCGG
ATGCCGGTGAGC
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