mRNA_H-elongata_contig85848.16167.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig85848.16167.1
Unique NamemRNA_H-elongata_contig85848.16167.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 172 bits (436), Expect = 1.950e-45
Identity = 87/228 (38.16%), Postives = 142/228 (62.28%), Query Frame = 1
Query:   16 VYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQKFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESMAE 699
            V+++V RP+D+ + G+K ++K K G D +VEKYK RLVAQGF  VEG+ Y E ++P   + SIR+LLA AA  D E+   DV+ AFL  +++EE+Y ++   ++    AV RLKK +YGL QA R W  K   ++  +GF + + D CVF K +D    ++ V +VDD +  +    ++ +  ++LG +F + D+G+  + +   +TRNR+ R +++ Q  Y+E + E
Sbjct: 1026 VFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAV-YVDDNMVLSDSLDLVTKTKSDLGSRFDMTDLGEVCWILNMEVTRNRQERTIRLSQSQYIEDILE 1252          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A7D9HXK4_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HXK4_PARCT)

HSP 1 Score: 159 bits (403), Expect = 4.770e-41
Identity = 87/238 (36.55%), Postives = 147/238 (61.76%), Query Frame = 1
Query:    1 MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEY--QKFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVV-DSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESMAETF 705
            ++EN  ++ V+ PK K V G+K ++K K  ++  V++YK RLVAQG+   EGV Y+E +SP +   +IR LLA + AK+ E+   DV+ AFL+ ++ EE+Y    + Y  ++ P  V +LKK IYGL Q+ RCWNN     + + G++Q + DPC++ K + D    +++ +HVDDIL  + D  ++      +G KFK+ D+G+ ++ +G  I R+R+  ++ I Q  Y++ + + F
Sbjct:  749 LIENETWELVSLPKGKNVVGSKWVFKVKRDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNL-EEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQSARCWNNAIDTFLKSSGYKQMESDPCLYMKSIRDQNGVIILSIHVDDILLFSNDSCMLSEEKKLIGLKFKVDDMGEVKHVLGMVIRRDRRKGKMMISQSTYLQGILKRF 985          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A8J4BUU7_9CHLO (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4BUU7_9CHLO)

HSP 1 Score: 149 bits (377), Expect = 1.210e-40
Identity = 87/229 (37.99%), Postives = 137/229 (59.83%), Query Frame = 1
Query:   25 QVARPKDKLVAGTKVL-----YKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQ-KFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESM 693
            ++ARP +    GT++L     YK K G D ++E++K RLVA+G+    G+ Y E ++PT   AS+R LLA A+AK   +   DV  AFL  +++EEL+ +    Y+ K P    RLK+ IYGL QA RCW  K    +  +GF+  + DP +F K  D    V ++VHVDDI+T + D  ++ +  A +G+ FK++D+G+A+ ++G  I+R     E+K+ Q  Y+E +
Sbjct:   15 ELARPPE----GTRLLPCRWVYKVKRGADGEIERFKARLVAKGYEQRAGIDYGELFAPTSRFASLRALLAVASAKGMPIHQLDVSTAFLNGELEEELWMQQPPGYESKDPNQACRLKRSIYGLKQAPRCWYVKLVAALDKLGFKPSQADPALFIKK-DENGIVYLLVHVDDIVTTSDDVELIKKVKAAVGEAFKIRDLGEAKVFLGMEISRGENG-EVKLSQQRYIEEL 237          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A7D9IUY0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IUY0_PARCT)

HSP 1 Score: 157 bits (398), Expect = 2.350e-40
Identity = 89/243 (36.63%), Postives = 143/243 (58.85%), Query Frame = 1
Query:    1 MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQ--KFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAE----VVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESMAETFDV 711
            ++EN  ++ V  P DK + G++ ++K K   D  VEK+K RLVAQG+   EG+ Y E +SP +   SIR LLA A   D E+   DV  AFL+ D+ +E+Y +  E Y+  + P  V +LKK +YGL Q+ RCWN+     + + G++Q   D C++ K V  +      V++ +HVDDIL  + D  +++     +G KFK++D+G+  + +G  I R+R +R L I Q  Y+E + + F++
Sbjct:  859 LMENGTWELVPPPDDKNIVGSRWVFKVKRKADGSVEKFKARLVAQGYSQTEGIDYNEVFSPVVRNTSIRSLLALANILDWEIHQMDVRTAFLQGDLTDEIYMKQPEGYRSKENPDHVCKLKKSLYGLKQSARCWNSTLDSFLKSSGYKQVGADSCLYMKSVKLQNGKINFVILSIHVDDILWFSNDVIMLEEEKVAIGTKFKVEDLGEVSHILGMLIKRDRDSRTLTISQSKYLEGVLKRFNM 1101          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A8J4LT00_9CHLO (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4LT00_9CHLO)

HSP 1 Score: 150 bits (380), Expect = 4.520e-39
Identity = 88/229 (38.43%), Postives = 137/229 (59.83%), Query Frame = 1
Query:   25 QVARPKDKLVAGTKVL-----YKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQ-KFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESM 693
            ++ARP +    GT++L     YK K G D ++E++K RLVA+G+    G+ Y E ++PT   AS+R LLA AAAK   +   DV  AFL  +++EEL+ +    Y+ K P    RLK+ IYGL QA RCW  K    +  +GF+  + DP +F K  D    V ++VHVDDI+T + D  ++ +  A +G+ FK++D+G+A+ ++G  I+R     E+K+ Q  Y+E +
Sbjct:   23 ELARPPE----GTRLLPCRWVYKVKRGADGEIERFKVRLVAKGYEQRAGIDYGELFAPTSRFASLRALLAVAAAKGMPIHQLDVSTAFLNGELEEELWMQQPPGYESKDPNLACRLKRSIYGLKQAPRCWYVKLVAALDKLGFKPSQADPALFIKK-DENGIVYLLVHVDDIITTSDDVELIKKVKAAVGEAFKIRDLGEAKVFLGMEISRGENG-EVKLSQRRYIEEL 245          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI)

HSP 1 Score: 152 bits (384), Expect = 1.050e-38
Identity = 85/237 (35.86%), Postives = 136/237 (57.38%), Query Frame = 1
Query:    1 MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQKFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESMAETFDV 711
            +V+N  Y+ V  P  K     K +YK K  +  +  +YK RLV +G   V G+ + E YSP +  +S+R L++ AA KD ++ H DV+ A+L  D++EE+Y      + +  G V RLKK +YGL QA RCWN K    +A + F + K DPC+F +  +S A V+V + VDD++  + +     +  + L   F++KD+G     +G ++TR+R  R+L IDQ  Y+E + + F +
Sbjct:  251 LVKNNTYEVVDLPPGKKTLSMKWVYKIKETEGDR--RYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTES-AIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSM 484          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 152 bits (384), Expect = 1.750e-38
Identity = 85/237 (35.86%), Postives = 136/237 (57.38%), Query Frame = 1
Query:    1 MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQKFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESMAETFDV 711
            +V+N  Y+ V  P  K     K +YK K  +  +  +YK RLV +G   V G+ + E YSP +  +S+R L++ AA KD ++ H DV+ A+L  D++EE+Y      + +  G V RLKK +YGL QA RCWN K    +A + F + K DPC+F +  +S A V+V + VDD++  + +     +  + L   F++KD+G     +G ++TR+R  R+L IDQ  Y+E + + F +
Sbjct:  856 LVKNNTYEVVDLPPGKKTLSMKWVYKIKETEGDR--RYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTES-AIVIVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSM 1089          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A8J4FPZ7_9CHLO (Uncharacterized protein n=20 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FPZ7_9CHLO)

HSP 1 Score: 152 bits (383), Expect = 2.390e-38
Identity = 87/229 (37.99%), Postives = 136/229 (59.39%), Query Frame = 1
Query:   25 QVARPKDKLVAGTKVL-----YKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQ-KFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESM 693
            ++ARP +    GT++L     YK K G D ++E++K  LVA+G+    G+ Y E ++PT   AS+R LLA AAAK   +   DV  AFL  +++EEL+ +    Y+ K P    RLK+ IYGL QA RCW  K    +  +GF+  + DP +F K  D    V ++VHVDDI+T + D  ++ +  A +G+ FK++D+G+A+ ++G  I+R     E+K+ Q  Y+E +
Sbjct:  879 ELARPPE----GTRLLPCRWVYKVKRGADGEIERFKAHLVAKGYEQRAGIDYGELFAPTSRFASLRALLAVAAAKGMPIHQLDVSTAFLNGELEEELWMQQPPGYESKDPNLACRLKRSIYGLKQAPRCWYVKLVAALDKLGFKPSQADPALFIKKKDENGIVYLLVHVDDIVTTSDDVELIKKVKAAVGEAFKIRDLGEAKVFLGMEISRGENG-EVKLTQQRYIEEL 1102          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI)

HSP 1 Score: 151 bits (381), Expect = 4.240e-38
Identity = 87/225 (38.67%), Postives = 134/225 (59.56%), Query Frame = 1
Query:    1 MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQKF-PGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQ 672
            ++EN  ++ V +P+       K +YK K      +E++K RLVA+GF   +GV + E Y+P     ++R LL   AA+D EL   DV+ AFL  +++EE+Y +  + Y++  P  V RLKK IYGL QA R W+ K   ++  I F+  + D  +F  V+D E  V VVV VDDIL  AK +  + +  A L +KF ++D+G A Y++G  +TR+R+AR +K+ Q
Sbjct:  587 LLENGTWELVPKPEGVKPVPMKWVYKIKRDAAGNIERFKSRLVAKGFLQRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPETVCRLKKTIYGLRQAPRAWHQKLKTELGEIEFRASESDAALFTGVIDGE-RVWVVVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQ 810          
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Match: A0A8J4GC79_9CHLO (Uncharacterized protein (Fragment) n=13 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GC79_9CHLO)

HSP 1 Score: 150 bits (380), Expect = 5.680e-38
Identity = 88/229 (38.43%), Postives = 137/229 (59.83%), Query Frame = 1
Query:   25 QVARPKDKLVAGTKVL-----YKRKVGQDSKVEKYKCRLVAQGFWLVEGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEELYREISEEYQ-KFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKLDPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDIGDARYYMGCHITRNRKARELKIDQHLYVESM 693
            ++ARP +    GT++L     YK K G D ++E++K RLVA+G+    G+ Y E ++PT   AS+R LLA AAAK   +   DV  AFL  +++EEL+ +    Y+ K P    RLK+ IYGL QA RCW  K    +  +GF+  + DP +F K  D    V ++VHVDDI+T + D  ++ +  A +G+ FK++D+G+A+ ++G  I+R     E+K+ Q  Y+E +
Sbjct:  777 ELARPPE----GTRLLPCRWVYKVKRGADGEIERFKARLVAKGYEQRAGIDYGELFAPTSRFASLRALLAVAAAKGMPIHQLDVSTAFLNGELEEELWMQQPPGYESKDPNQACRLKRSIYGLKQAPRCWYVKLVAALDKLGFKPSQADPALFIKK-DENGIVYLLVHVDDIVTTSDDVELIKKVKAAVGEAFKIRDLGEAKVFLGMEISRGENG-EVKLSQQRYIEEL 999          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig85848.16167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C2WN23_AMAMK1.950e-4538.16Integrase catalytic domain-containing protein (Fra... [more]
A0A7D9HXK4_PARCT4.770e-4136.55Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8J4BUU7_9CHLO1.210e-4037.99Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9IUY0_PARCT2.350e-4036.63Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A8J4LT00_9CHLO4.520e-3938.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GI29_9HEMI1.050e-3835.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GGZ1_9HEMI1.750e-3835.86Integrase catalytic domain-containing protein (Fra... [more]
A0A8J4FPZ7_9CHLO2.390e-3837.99Uncharacterized protein n=20 Tax=Volvox reticulife... [more]
A0A1Y1IVX6_KLENI4.240e-3838.67Integrase catalytic domain-containing protein (Fra... [more]
A0A8J4GC79_9CHLO5.680e-3838.43Uncharacterized protein (Fragment) n=13 Tax=Volvox... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig85848contigH-elongata_contig85848:1125..1853 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score154.5
Seed ortholog evalue6.5e-35
Seed eggNOG ortholog5111.M1VW57
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs21AV1@147550,38DPC@33154,3NUZ7@4751,3QNZW@4890,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelSordariomycetes
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons1
Model size729
Cds size729
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622931262.0500436-CDS-H-elongata_contig85848:1124..18531622931262.0500436-CDS-H-elongata_contig85848:1124..1853Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85848 1125..1853 -
1691679764.2787015-CDS-H-elongata_contig85848:1124..18531691679764.2787015-CDS-H-elongata_contig85848:1124..1853Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig85848 1125..1853 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig85848.16167.1prot_H-elongata_contig85848.16167.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig85848 1125..1853 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig85848.16167.1

>prot_H-elongata_contig85848.16167.1 ID=prot_H-elongata_contig85848.16167.1|Name=mRNA_H-elongata_contig85848.16167.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=243bp
MVENCVYKQVARPKDKLVAGTKVLYKRKVGQDSKVEKYKCRLVAQGFWLV
EGVHYTEKYSPTLSTASIRMLLATAAAKDSELRHFDVEQAFLKADIDEEL
YREISEEYQKFPGAVGRLKKVIYGLVQARRCWNNKFCGDMAAIGFQQGKL
DPCVFRKVVDSEAEVVVVVHVDDILTHAKDKAIMDRFTAELGQKFKLKDI
GDARYYMGCHITRNRKARELKIDQHLYVESMAETFDVKKESKI
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mRNA from alignment at H-elongata_contig85848:1125..1853-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig85848.16167.1 ID=mRNA_H-elongata_contig85848.16167.1|Name=mRNA_H-elongata_contig85848.16167.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=729bp|location=Sequence derived from alignment at H-elongata_contig85848:1125..1853- (Himanthalia elongata Himel1 dioecious)
ATGGTCGAGAACTGCGTTTATAAGCAGGTGGCTCGGCCGAAGGATAAACT CGTGGCTGGCACAAAAGTGCTCTACAAGCGAAAGGTTGGGCAGGACAGCA AGGTCGAAAAATACAAGTGCCGACTTGTAGCTCAAGGTTTCTGGCTGGTG GAAGGTGTACACTATACGGAAAAATACTCGCCCACGCTGTCGACCGCGTC AATCCGGATGCTTTTGGCCACAGCAGCGGCTAAGGACAGTGAGCTGCGCC ATTTCGACGTAGAACAGGCATTCTTGAAAGCGGACATCGATGAGGAGTTA TATAGAGAGATCTCCGAGGAGTACCAGAAATTTCCGGGGGCAGTGGGACG GCTGAAAAAGGTCATTTACGGACTCGTACAGGCGAGGAGGTGCTGGAACA ACAAATTCTGCGGTGATATGGCGGCGATTGGATTCCAGCAGGGAAAGTTG GATCCGTGCGTGTTCCGTAAAGTCGTTGACAGCGAGGCGGAAGTGGTGGT GGTCGTACACGTGGACGATATTCTTACTCACGCCAAGGACAAAGCGATTA TGGATAGATTCACGGCTGAGCTTGGACAAAAGTTCAAATTGAAGGACATA GGTGACGCCAGGTACTACATGGGATGTCATATTACTAGGAACCGCAAGGC GCGCGAGCTAAAGATCGACCAACACTTGTACGTGGAGTCGATGGCGGAAA CGTTCGACGTCAAGAAGGAAAGCAAGATA
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Coding sequence (CDS) from alignment at H-elongata_contig85848:1125..1853-

>mRNA_H-elongata_contig85848.16167.1 ID=mRNA_H-elongata_contig85848.16167.1|Name=mRNA_H-elongata_contig85848.16167.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1458bp|location=Sequence derived from alignment at H-elongata_contig85848:1125..1853- (Himanthalia elongata Himel1 dioecious)
ATGGTCGAGAACTGCGTTTATAAGCAGGTGGCTCGGCCGAAGGATAAACT
CGTGGCTGGCACAAAAGTGCTCTACAAGCGAAAGGTTGGGCAGGACAGCA
AGGTCGAAAAATACAAGTGCCGACTTGTAGCTCAAGGTTTCTGGCTGGTG
GAAGGTGTACACTATACGGAAAAATACTCGCCCACGCTGTCGACCGCGTC
AATCCGGATGCTTTTGGCCACAGCAGCGGCTAAGGACAGTGAGCTGCGCC
ATTTCGACGTAGAACAGGCATTCTTGAAAGCGGACATCGATGAGGAGTTA
TATAGAGAGATCTCCGAGGAGTACCAGAAATTTCCGGGGGCAGTGGGACG
GCTGAAAAAGGTCATTTACGGACTCGTACAGGCGAGGAGGTGCTGGAACA
ACAAATTCTGCGGTGATATGGCGGCGATTGGATTCCAGCAGGGAAAGTTG
GATCCGTGCGTGTTCCGTAAAGTCGTTGACAGCGAGGCGGAAGTGGTGGT
GGTCGTACACGTGGACGATATTCTTACTCACGCCAAGGACAAAGCGATTA
TGGATAGATTCACGGCTGAGCTTGGACAAAAGTTCAAATTGAAGGACATA
GGTGACGCCAGGTACTACATGGGATGTCATATTACTAGGAACCGCAAGGC
GCGCGAGCTAAAGATCGACCAACACTTGTACGTGGAGTCGATGGCGGAAA
CGTTCGACGTCAAGAAGGAAAGCAAGATAATGGTCGAGAACTGCGTTTAT
AAGCAGGTGGCTCGGCCGAAGGATAAACTCGTGGCTGGCACAAAAGTGCT
CTACAAGCGAAAGGTTGGGCAGGACAGCAAGGTCGAAAAATACAAGTGCC
GACTTGTAGCTCAAGGTTTCTGGCTGGTGGAAGGTGTACACTATACGGAA
AAATACTCGCCCACGCTGTCGACCGCGTCAATCCGGATGCTTTTGGCCAC
AGCAGCGGCTAAGGACAGTGAGCTGCGCCATTTCGACGTAGAACAGGCAT
TCTTGAAAGCGGACATCGATGAGGAGTTATATAGAGAGATCTCCGAGGAG
TACCAGAAATTTCCGGGGGCAGTGGGACGGCTGAAAAAGGTCATTTACGG
ACTCGTACAGGCGAGGAGGTGCTGGAACAACAAATTCTGCGGTGATATGG
CGGCGATTGGATTCCAGCAGGGAAAGTTGGATCCGTGCGTGTTCCGTAAA
GTCGTTGACAGCGAGGCGGAAGTGGTGGTGGTCGTACACGTGGACGATAT
TCTTACTCACGCCAAGGACAAAGCGATTATGGATAGATTCACGGCTGAGC
TTGGACAAAAGTTCAAATTGAAGGACATAGGTGACGCCAGGTACTACATG
GGATGTCATATTACTAGGAACCGCAAGGCGCGCGAGCTAAAGATCGACCA
ACACTTGTACGTGGAGTCGATGGCGGAAACGTTCGACGTCAAGAAGGAAA
GCAAGATA
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